Protein: BRD9
Bromodomain-containing protein 9 (Rhabdomyosarcoma antigen MU-RMS-40.8)

Gene: BRD9
Organism: Homo sapiens
Interactions: 106
UniProt ID: Q9H8M2

Gene Ontology (top 5):
GO:0000785 - chromatin
GO:0003676 - nucleic acid binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0006338 - chromatin remodeling

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

260467

BRD4
Bromodomain-containing protein 4

5

20

Small-scale

0.920

High

903484

SMCA4
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4

5

20

Small-scale

0.915

High

1141312

BRD3
Bromodomain-containing protein 3

2

20

High-throughput

0.776

High

674332

BRD2
Bromodomain-containing protein 2

2

20

High-throughput

0.754

High

903254

SMCA2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2

2

20

High-throughput

0.754

High

1368383

REQU
Zinc finger protein ubi-d4

2

20

High-throughput

0.754

High

1392056

SMRD1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1

7

18

High-throughput

0.745

High

1149754

SSXT
Protein SSXT

5

20

Small-scale

0.714

High

1347555

SMRC2
SWI/SNF complex subunit SMARCC2

4

20

Small-scale

0.694

High

1196911

BCL7A
B-cell CLL/lymphoma 7 protein family member A

4

5

High-throughput

0.691

High

1357471

BCL7C
B-cell CLL/lymphoma 7 protein family member C

3

5

High-throughput

0.675

High

1370708

SMRC1
SWI/SNF complex subunit SMARCC1

3

20

High-throughput

0.656

High

1281246

CATIP
Ciliogenesis-associated TTC17-interacting protein

3

0

High-throughput

0.646

High

1436430

BICRA
BRD4-interacting chromatin-remodeling complex-associated protein

3

20

Small-scale

0.640

High

1287991

PB1
Protein polybromo-1

1

19

High-throughput

0.618

High

1356506

PHF10
PHD finger protein 10

1

20

High-throughput

0.618

High

1368271

DPF1
Zinc finger protein neuro-d4

1

20

High-throughput

0.618

High

1368331

DPF3
Zinc finger protein DPF3

1

20

High-throughput

0.618

High

1436428

BRD7
Bromodomain-containing protein 7

1

18

High-throughput

0.618

High

1348961

ZCH10
Zinc finger CCHC domain-containing protein 10

2

2

High-throughput

0.601

High

355297

ACL6A
Actin-like protein 6A

2

18

High-throughput

0.584

High

1134538

NOLC1
Nucleolar and coiled-body phosphoprotein 1

2

10

High-throughput

0.584

High

1230867

BICRL
BRD4-interacting chromatin-remodeling complex-associated protein-like

2

3

Small-scale

0.584

High

396966

ESR1
Estrogen receptor

2

20

High-throughput

0.571

High

1086700

SNF5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

2

8

Small-scale

0.571

High

1436432

S18L2
SS18-like protein 2

2

10

High-throughput

0.558

High

879755

MAPK2
MAP kinase-activated protein kinase 2

1

6

High-throughput

0.536

High

1126866

NF2L1
Endoplasmic reticulum membrane sensor NFE2L1

1

20

High-throughput

0.536

High

1145377

RNPS1
RNA-binding protein with serine-rich domain 1

1

9

High-throughput

0.536

High

855519

ATRX
Transcriptional regulator ATRX

1

20

Small-scale

0.527

High

1347870

RIN3
Ras and Rab interactor 3

1

3

High-throughput

0.489

High

143262

NFIB
Nuclear factor 1 B-type

1

20

High-throughput

0.479

High

154754

ARI1A
AT-rich interactive domain-containing protein 1A

1

12

High-throughput

0.479

High

210118

CRX
Cone-rod homeobox protein

1

20

High-throughput

0.479

High

217524

E41L2
Band 4.1-like protein 2

1

3

High-throughput

0.479

High

223337

PRC1
Protein regulator of cytokinesis 1

1

5

High-throughput

0.479

High

242949

PRKN
E3 ubiquitin-protein ligase parkin

1

6

High-throughput

0.479

High

251255

RNBP6
Ran-binding protein 6

1

5

High-throughput

0.479

High

259115

DNJA2
DnaJ homolog subfamily A member 2

1

12

High-throughput

0.479

High

274052

CREST
Calcium-responsive transactivator

1

20

High-throughput

0.479

High

406655

MYCN
N-myc proto-oncogene protein

1

20

High-throughput

0.479

High

474297

NFIC
Nuclear factor 1 C-type

1

20

High-throughput

0.479

High

688154

EF1G
Elongation factor 1-gamma

1

5

High-throughput

0.479

High

696528

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

5

High-throughput

0.479

High

769198

RFA3
Replication protein A 14 kDa subunit

1

2

High-throughput

0.479

High

789577

PPARG
Peroxisome proliferator-activated receptor gamma

1

20

High-throughput

0.479

High

799479

BRCA1
Breast cancer type 1 susceptibility protein

1

7

High-throughput

0.479

High

851669

GATA4
Transcription factor GATA-4

1

17

High-throughput

0.479

High

879472

NR2C2
Nuclear receptor subfamily 2 group C member 2

1

20

High-throughput

0.479

High

884399

UBE2A
Ubiquitin-conjugating enzyme E2 A

1

5

High-throughput

0.479

High

887230

CEBPA
CCAAT/enhancer-binding protein alpha

1

16

High-throughput

0.479

High

913403

MSH6
DNA mismatch repair protein Msh6

1

6

High-throughput

0.479

High

960570

PSME3
Proteasome activator complex subunit 3

1

2

Small-scale

0.479

High

998031

CSK21
Casein kinase II subunit alpha

1

20

High-throughput

0.479

High

998819

H31
Histone H3.1

1

20

High-throughput

0.479

High

1017216

H33
Histone H3.3

1

20

High-throughput

0.479

High

1029944

RUNX1
Runt-related transcription factor 1

1

8

High-throughput

0.479

High

1040213

M2OM
Mitochondrial 2-oxoglutarate/malate carrier protein

1

12

High-throughput

0.479

High

1045776

TF65
Transcription factor p65

1

20

High-throughput

0.479

High

1055971

RAD51
DNA repair protein RAD51 homolog 1

1

1

Small-scale

0.479

High

1088024

NFIA
Nuclear factor 1 A-type

1

20

High-throughput

0.479

High

1105093

TCOF
Treacle protein

1

17

High-throughput

0.479

High

1131831

LBR
Delta(14)-sterol reductase LBR

1

2

High-throughput

0.479

High

1133666

NFIX
Nuclear factor 1 X-type

1

20

High-throughput

0.479

High

1138069

TNIP1
TNFAIP3-interacting protein 1

1

15

High-throughput

0.479

High

1228280

ARID2
AT-rich interactive domain-containing protein 2

1

20

High-throughput

0.479

High

1239669

JMJD6
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6

1

10

High-throughput

0.479

High

1247678

SMRD3
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3

1

18

High-throughput

0.479

High

1313439

SMC5
Structural maintenance of chromosomes protein 5

1

15

High-throughput

0.479

High

1331764

JMY
Junction-mediating and -regulatory protein

1

1

High-throughput

0.479

High

1338766

ARI1B
AT-rich interactive domain-containing protein 1B

1

19

High-throughput

0.479

High

1370752

SMRD2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2

1

20

High-throughput

0.479

High

1380013

SMCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1

1

20

High-throughput

0.479

High

1393410

NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1

1

1

High-throughput

0.479

High

1419515

NSD3
Histone-lysine N-methyltransferase NSD3

1

18

Small-scale

0.479

High

1432356

PININ
Pinin

1

1

High-throughput

0.479

High

1433077

CHM4B
Charged multivesicular body protein 4b

1

4

High-throughput

0.479

High

1436426

ECT2
Protein ECT2

1

4

High-throughput

0.479

High

1436427

CWC22
Pre-mRNA-splicing factor CWC22 homolog

1

7

High-throughput

0.479

High

1436431

ZRAN1
Ubiquitin thioesterase ZRANB1

1

5

High-throughput

0.479

High

1436434

SRRM2
Serine/arginine repetitive matrix protein 2

1

20

High-throughput

0.479

High

1428358

MLP3B
Microtubule-associated protein 1 light chain 3 beta

1

3

High-throughput

0.457

High

1430331

GBRL1
Gamma-aminobutyric acid receptor-associated protein-like 1

1

3

High-throughput

0.457

High

1431890

CXXC4
CXXC-type zinc finger protein 4

1

1

High-throughput

0.445

High

106664

APRIO
Alternative prion protein

1

1

High-throughput

0.437

High

117169

J9JIF5
CXXC-type zinc finger protein 4

1

1

High-throughput

0.437

High

126186

AP3B1
AP-3 complex subunit beta-1

1

13

High-throughput

0.437

High

292231

S2512
Electrogenic aspartate/glutamate antiporter SLC25A12, mitochondrial

1

8

High-throughput

0.437

High

346345

STAU1
Double-stranded RNA-binding protein Staufen homolog 1

1

13

High-throughput

0.437

High

882891

EFTU
Elongation factor Tu, mitochondrial

1

7

High-throughput

0.437

High

925608

MOT1
Monocarboxylate transporter 1

1

5

High-throughput

0.437

High

995824

ACTC
Actin, alpha cardiac muscle 1

1

13

High-throughput

0.437

High

996857

TBA1B
Tubulin alpha-1B chain

1

6

High-throughput

0.437

High

1041699

TNAP2
Tumor necrosis factor alpha-induced protein 2

1

1

Small-scale

0.437

High

1058662

CKAP4
Cytoskeleton-associated protein 4

1

17

High-throughput

0.437

High

1125061

RCN2
Reticulocalbin-2

1

14

High-throughput

0.437

High

1218357

OTUD1
OTU domain-containing protein 1

1

2

High-throughput

0.437

High

1227477

A16L1
Autophagy-related protein 16-1

1

10

High-throughput

0.437

High

1246997

RICTR
Rapamycin-insensitive companion of mTOR

1

6

High-throughput

0.437

High

1323506

S11IP
Serine/threonine-protein kinase 11-interacting protein

1

7

High-throughput

0.437

High

1333814

RDH13
Retinol dehydrogenase 13

1

1

High-throughput

0.437

High

1393500

PGAM5
Serine/threonine-protein phosphatase PGAM5, mitochondrial

1

4

High-throughput

0.437

High

1436429

HPBP1
Hsp70-binding protein 1

1

12

High-throughput

0.437

High

1436433

S2513
Electrogenic aspartate/glutamate antiporter SLC25A13, mitochondrial

1

8

High-throughput

0.437

High

952348

GBRL2
Gamma-aminobutyric acid receptor-associated protein-like 2

1

3

High-throughput

0.373

High

1433198

MLP3A
Microtubule-associated protein 1 light chain 3 alpha

1

3

High-throughput

0.373

High


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Last updated: 11Aug2025