Protein: RS13
Small ribosomal subunit protein uS13 (30S ribosomal protein S13)

Gene: RS13, rpsM
Organism: Escherichia coli K-12
Interactions: 128
UniProt ID: P0A7S9

Gene Ontology (top 5):
GO:0000049 - tRNA binding
GO:0002181 - cytoplasmic translation
GO:0003735 - structural constituent of ribosome
GO:0005737 - cytoplasm
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

493371

RLUC
Ribosomal large subunit pseudouridine synthase C

3

2

High-throughput

0.657

High

493369

CSPC
Cold shock-like protein CspC

2

5

High-throughput

0.612

High

493358

SYT
Threonine--tRNA ligase

2

2

High-throughput

0.588

High

493362

CSPD
Cold shock-like protein CspD

2

5

High-throughput

0.588

High

493372

RSUA
Ribosomal small subunit pseudouridine synthase A

2

2

High-throughput

0.588

High

493378

ALLR
HTH-type transcriptional repressor AllR

2

1

High-throughput

0.588

High

493397

ICLR
Transcriptional repressor IclR

2

1

High-throughput

0.588

High

493401

RNR
Ribonuclease R

2

1

High-throughput

0.588

High

493424

RLUB
Ribosomal large subunit pseudouridine synthase B

2

2

High-throughput

0.588

High

493434

RL4
Large ribosomal subunit protein uL4

2

1

High-throughput

0.588

High

444273

TOP1
DNA topoisomerase 1

2

0

High-throughput

0.585

High

368946

SYGA
Glycine--tRNA ligase alpha subunit

2

0

High-throughput

0.563

High

421095

PNP
Polyribonucleotide nucleotidyltransferase

2

0

High-throughput

0.563

High

489283

ACP
Acyl carrier protein

2

0

High-throughput

0.563

High

490627

FABA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase

2

0

High-throughput

0.563

High

491531

KDSA
2-dehydro-3-deoxyphosphooctonate aldolase

2

0

High-throughput

0.563

High

491917

RPPH
RNA pyrophosphohydrolase

2

0

High-throughput

0.563

High

493355

UVRC
UvrABC system protein C

2

0

High-throughput

0.563

High

493365

RNG
Ribonuclease G

2

0

High-throughput

0.563

High

493366

PHOL
PhoH-like protein

2

0

High-throughput

0.563

High

493395

YFIF
Uncharacterized tRNA/rRNA methyltransferase YfiF

2

0

High-throughput

0.563

High

493437

NFI
Endonuclease V

2

0

High-throughput

0.563

High

493388

FKBX
FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase

2

0

High-throughput

0.547

High

382640

RS7
Small ribosomal subunit protein uS7

1

2

High-throughput

0.536

High

493348

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.536

High

493349

RS4
Small ribosomal subunit protein uS4

1

2

High-throughput

0.536

High

493363

CSPG
Cold shock-like protein CspG

1

5

High-throughput

0.536

High

493364

CSPI
Cold shock-like protein CspI

1

5

High-throughput

0.536

High

493370

RL13
Large ribosomal subunit protein uL13

1

1

High-throughput

0.536

High

493377

DBHB
DNA-binding protein HU-beta

1

1

High-throughput

0.536

High

493394

RL17
Large ribosomal subunit protein bL17

1

1

High-throughput

0.536

High

493402

LPXD
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase

1

3

High-throughput

0.536

High

493409

RECG
ATP-dependent DNA helicase RecG

1

3

High-throughput

0.536

High

493413

MFD
Transcription-repair-coupling factor

1

5

High-throughput

0.536

High

493422

CSPB
Cold shock-like protein CspB

1

5

High-throughput

0.536

High

493433

RL2
Large ribosomal subunit protein uL2

1

2

High-throughput

0.536

High

444334

ERA
GTPase Era

1

0

High-throughput

0.513

High

492417

RL11
Large ribosomal subunit protein uL11

1

0

High-throughput

0.513

High

493361

ALAA
Glutamate-pyruvate aminotransferase AlaA

1

0

High-throughput

0.513

High

493384

RLMM
Ribosomal RNA large subunit methyltransferase M

1

0

High-throughput

0.513

High

493386

UVRY
Response regulator UvrY

1

0

High-throughput

0.513

High

493391

PDXH
Pyridoxine/pyridoxamine 5'-phosphate oxidase

1

0

High-throughput

0.513

High

493399

UBIG
Ubiquinone biosynthesis O-methyltransferase

1

0

High-throughput

0.513

High

493403

ADD
Adenosine deaminase

1

0

High-throughput

0.513

High

493404

PSS
CDP-diacylglycerol--serine O-phosphatidyltransferase PssA

1

0

High-throughput

0.513

High

493405

FMT
Methionyl-tRNA formyltransferase

1

0

High-throughput

0.513

High

493407

WAAC
Lipopolysaccharide heptosyltransferase 1

1

0

High-throughput

0.513

High

493410

FLIS
Flagellar secretion chaperone FliS

1

0

High-throughput

0.513

High

493417

YIIS
UPF0381 protein YiiS

1

0

High-throughput

0.513

High

493427

RSMC
Ribosomal RNA small subunit methyltransferase C

1

0

High-throughput

0.513

High

493432

USPC
Universal stress protein C

1

0

High-throughput

0.513

High

493443

NPD
NAD-dependent protein deacylase

1

0

High-throughput

0.513

High

493449

MTFA
Mlc titration factor A

1

0

High-throughput

0.513

High

493448

DCYD
D-cysteine desulfhydrase

1

2

High-throughput

0.500

High

493414

AAS
Bifunctional protein Aas [Includes: 2-acylglycerophosphoethanolamine acyltransferase

1

1

High-throughput

0.489

High

473251

DNAJ
Chaperone protein DnaJ

1

5

High-throughput

0.484

High

490951

IHFB
Integration host factor subunit beta

1

1

High-throughput

0.484

High

493350

RS5
Small ribosomal subunit protein uS5

1

5

High-throughput

0.484

High

493360

RPOC
DNA-directed RNA polymerase subunit beta'

1

2

High-throughput

0.484

High

493367

DEAD
ATP-dependent RNA helicase DeaD

1

5

High-throughput

0.484

High

493419

CBPA
Curved DNA-binding protein

1

2

High-throughput

0.484

High

493406

MAK
Fructokinase

1

0

High-throughput

0.479

High

493436

YQJI
Transcriptional regulator YqjI

1

0

High-throughput

0.479

High

493452

HLDE
Bifunctional protein HldE [Includes: D-beta-D-heptose 7-phosphate kinase

1

0

High-throughput

0.479

High

493357

RHLB
ATP-dependent RNA helicase RhlB

1

3

High-throughput

0.479

High

493382

KPYK1
Pyruvate kinase I

1

1

High-throughput

0.479

High

493400

PARE
DNA topoisomerase 4 subunit B

1

1

High-throughput

0.479

High

395065

DNAA
Chromosomal replication initiator protein DnaA

1

0

High-throughput

0.464

High

490696

FIS
DNA-binding protein Fis

1

0

High-throughput

0.464

High

490855

HFQ
RNA-binding protein Hfq

1

0

High-throughput

0.464

High

491473

IF3
Translation initiation factor IF-3 [Cleaved into: Translation initiation factor IF-3, N-terminally processed; Translation initiation factor IF-3S]

1

0

High-throughput

0.464

High

492122

HSLV
ATP-dependent protease subunit HslV

1

0

High-throughput

0.464

High

493351

RNPA
Ribonuclease P protein component

1

0

High-throughput

0.464

High

493352

RPOA
DNA-directed RNA polymerase subunit alpha

1

0

High-throughput

0.464

High

493353

RPOZ
DNA-directed RNA polymerase subunit omega

1

0

High-throughput

0.464

High

493368

ULAR
HTH-type transcriptional regulator UlaR

1

0

High-throughput

0.464

High

493389

SKP
Chaperone protein Skp

1

0

High-throughput

0.464

High

493426

RSGA
Small ribosomal subunit biogenesis GTPase RsgA

1

0

High-throughput

0.464

High

458772

FDHF
Formate dehydrogenase H

1

0

High-throughput

0.458

High

493359

TMAR
Pole-localizer protein TmaR

1

0

High-throughput

0.458

High

493376

DPS
DNA protection during starvation protein

1

0

High-throughput

0.458

High

493383

YGAM
Uncharacterized protein YgaM

1

0

High-throughput

0.458

High

493390

RIDA
2-iminobutanoate/2-iminopropanoate deaminase

1

0

High-throughput

0.458

High

493418

YJAG
Uncharacterized protein YjaG

1

0

High-throughput

0.458

High

493421

RLMN
Dual-specificity RNA methyltransferase RlmN

1

0

High-throughput

0.458

High

493435

GMHBB
D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase

1

0

High-throughput

0.458

High

493438

CSRA
Carbon storage regulator

1

0

High-throughput

0.458

High

493441

RLMF
Ribosomal RNA large subunit methyltransferase F

1

0

High-throughput

0.458

High

493430

HRPA
ATP-dependent RNA helicase HrpA

1

1

High-throughput

0.442

High

493375

ATPG
ATP synthase gamma chain

1

1

High-throughput

0.437

High

493451

LYSAC
Peptidyl-lysine N-acetyltransferase PatZ

2

0

High-throughput

0.313

High

493442

YBJX
Uncharacterized protein YbjX

2

0

High-throughput

0.307

High

489148

YIDB
Uncharacterized protein YidB

1

0

High-throughput

0.279

Low

493373

WZB
Low molecular weight protein-tyrosine-phosphatase Wzb

1

0

High-throughput

0.279

Low

493374

MEPK
Peptidoglycan L,D-endopeptidase MepK

1

0

High-throughput

0.279

Low

493379

RUTR
HTH-type transcriptional regulator RutR

1

0

High-throughput

0.279

Low

493380

YDIE
Uncharacterized protein YdiE

1

0

High-throughput

0.279

Low

493381

YECA
Uncharacterized protein YecA

1

0

High-throughput

0.279

Low

493387

DMA
DNA adenine methylase

1

0

High-throughput

0.279

Low

493393

RELA
GTP pyrophosphokinase

1

0

High-throughput

0.279

Low

493398

MUTY
Adenine DNA glycosylase

1

0

High-throughput

0.279

Low

493408

LPXM
Lipid A biosynthesis myristoyltransferase

1

0

High-throughput

0.279

Low

493411

INAA
Protein InaA

1

0

High-throughput

0.279

Low

493412

NARQ
Nitrate/nitrite sensor protein NarQ

1

0

High-throughput

0.279

Low

493415

CBRC
UPF0167 protein CbrC

1

0

High-throughput

0.279

Low

493425

USPF
Universal stress protein F

1

0

High-throughput

0.279

Low

493428

YJJU
Uncharacterized protein YjjU

1

0

High-throughput

0.279

Low

493429

GARD
Galactarate dehydratase

1

0

High-throughput

0.279

Low

493439

WCAC
Putative colanic acid biosynthesis glycosyl transferase WcaC

1

0

High-throughput

0.279

Low

493440

WCAK
Colanic acid biosynthesis protein WcaK

1

0

High-throughput

0.279

Low

493444

BLUR
HTH-type transcriptional repressor BluR

1

0

High-throughput

0.279

Low

493445

RACR
DNA-binding transcriptional repressor RacR

1

0

High-throughput

0.279

Low

493446

YNEG
Uncharacterized protein YneG

1

0

High-throughput

0.279

Low

493447

YOBB
Uncharacterized protein YobB

1

0

High-throughput

0.279

Low

493454

YFCH
Epimerase family protein YfcH

1

0

High-throughput

0.279

Low

493455

MAA
Maltose O-acetyltransferase

1

0

High-throughput

0.279

Low

493385

YGGE
Uncharacterized protein YggE

1

0

High-throughput

0.261

Low

493450

YFFL
Uncharacterized protein YffL

1

0

High-throughput

0.261

Low

493354

YACL
UPF0231 protein YacL

1

0

High-throughput

0.253

Low

493356

TRMB
tRNA

1

0

High-throughput

0.253

Low

493396

RCSA
Transcriptional regulatory protein RcsA

1

0

High-throughput

0.253

Low

393857

PBPA
Penicillin-binding protein 1A

1

0

High-throughput

0.249

Low

493392

SOHB
Probable protease SohB

1

0

High-throughput

0.249

Low

493420

YADG
Uncharacterized ABC transporter ATP-binding protein YadG

1

0

High-throughput

0.249

Low

493423

WBBK
Putative glycosyltransferase WbbK

1

0

High-throughput

0.249

Low

493431

KDSD
Arabinose 5-phosphate isomerase KdsD

1

0

High-throughput

0.249

Low

493453

GTRB
Prophage bactoprenol glucosyl transferase homolog

1

0

High-throughput

0.249

Low

493416

INTA
Prophage integrase IntA

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025