Protein: RL13
Large ribosomal subunit protein uL13 (50S ribosomal protein L13)

Gene: RL13, rplM
Organism: Escherichia coli K-12
Interactions: 142
UniProt ID: P0AA10

Gene Ontology (top 5):
GO:0002181 - cytoplasmic translation
GO:0003729 - mRNA binding
GO:0003735 - structural constituent of ribosome
GO:0005737 - cytoplasm
GO:0005829 - cytosol

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

497512

MUKB
Chromosome partition protein MukB

2

2

High-throughput

0.601

High

497537

YDCY
Uncharacterized protein YdcY

2

0

High-throughput

0.588

High

421112

PNP
Polyribonucleotide nucleotidyltransferase

2

2

High-throughput

0.588

High

444290

TOP1
DNA topoisomerase 1

2

2

High-throughput

0.588

High

495478

RHLB
ATP-dependent RNA helicase RhlB

2

4

High-throughput

0.588

High

496888

LON
Lon protease

2

1

High-throughput

0.588

High

497478

CLPA
ATP-dependent Clp protease ATP-binding subunit ClpA

2

5

High-throughput

0.588

High

497503

SELB
Selenocysteine-specific elongation factor

2

3

High-throughput

0.588

High

497518

AIDB
Putative acyl-CoA dehydrogenase AidB

2

1

High-throughput

0.588

High

497529

RL4
Large ribosomal subunit protein uL4

2

2

High-throughput

0.588

High

497533

RLMB
23S rRNA

2

3

High-throughput

0.588

High

494785

SSRP
SsrA-binding protein

2

0

High-throughput

0.576

High

497502

DPO3A
DNA polymerase III subunit alpha

2

0

High-throughput

0.576

High

361745

PHSM
Maltodextrin phosphorylase

2

0

High-throughput

0.563

High

368954

SYGA
Glycine--tRNA ligase alpha subunit

2

0

High-throughput

0.563

High

490874

HFQ
RNA-binding protein Hfq

2

0

High-throughput

0.563

High

497474

YBCJ
Putative RNA-binding protein YbcJ

2

0

High-throughput

0.563

High

497487

YIBL
Uncharacterized protein YibL

2

0

High-throughput

0.563

High

497490

RL23
Large ribosomal subunit protein uL23

2

0

High-throughput

0.563

High

497496

SPOT
Bifunctional

2

0

High-throughput

0.563

High

497498

YHBY
RNA-binding protein YhbY

2

0

High-throughput

0.563

High

497506

ICLR
Transcriptional repressor IclR

2

0

High-throughput

0.563

High

497510

RNE
Ribonuclease E

2

0

High-throughput

0.563

High

497555

YAJL
Protein/nucleic acid deglycase 3

2

0

Small-scale

0.547

High

384014

RL15
Large ribosomal subunit protein uL15

1

3

High-throughput

0.536

High

492589

RL19
Large ribosomal subunit protein bL19

1

2

High-throughput

0.536

High

493142

RL9
Large ribosomal subunit protein bL9

1

2

High-throughput

0.536

High

493370

RS13
Small ribosomal subunit protein uS13

1

1

High-throughput

0.536

High

493877

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.536

High

494258

RS5
Small ribosomal subunit protein uS5

1

2

High-throughput

0.536

High

494422

RS9
Small ribosomal subunit protein uS9

1

2

High-throughput

0.536

High

497489

RL14
Large ribosomal subunit protein uL14

1

3

High-throughput

0.536

High

497497

RL17
Large ribosomal subunit protein bL17

1

4

High-throughput

0.536

High

497528

RL2
Large ribosomal subunit protein uL2

1

6

High-throughput

0.536

High

368789

SYW
Tryptophan--tRNA ligase

1

1

High-throughput

0.484

High

395111

DPO3E
DNA polymerase III subunit epsilon

1

1

High-throughput

0.484

High

395148

UVRD
DNA helicase II

1

3

High-throughput

0.484

High

490958

IHFB
Integration host factor subunit beta

1

1

High-throughput

0.484

High

491423

IF2
Translation initiation factor IF-2

1

7

High-throughput

0.484

High

491737

LPXA
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase

1

1

High-throughput

0.484

High

491810

MURA
UDP-N-acetylglucosamine 1-carboxyvinyltransferase

1

1

High-throughput

0.484

High

492066

IPYR
Inorganic pyrophosphatase

1

2

High-throughput

0.484

High

495521

SYT
Threonine--tRNA ligase

1

2

High-throughput

0.484

High

495802

RPOC
DNA-directed RNA polymerase subunit beta'

1

1

High-throughput

0.484

High

496251

CSPD
Cold shock-like protein CspD

1

6

High-throughput

0.484

High

496311

CSPG
Cold shock-like protein CspG

1

6

High-throughput

0.484

High

497073

DEAD
ATP-dependent RNA helicase DeaD

1

5

High-throughput

0.484

High

497268

ULAR
HTH-type transcriptional regulator UlaR

1

1

High-throughput

0.484

High

497397

CSPC
Cold shock-like protein CspC

1

6

High-throughput

0.484

High

497473

RLUC
Ribosomal large subunit pseudouridine synthase C

1

3

High-throughput

0.484

High

497491

MAP1
Methionine aminopeptidase

1

4

High-throughput

0.484

High

497509

RNR
Ribonuclease R

1

3

High-throughput

0.484

High

497511

LPXD
UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase

1

1

High-throughput

0.484

High

497515

MNME
tRNA modification GTPase MnmE

1

5

High-throughput

0.484

High

497523

RLUB
Ribosomal large subunit pseudouridine synthase B

1

3

High-throughput

0.484

High

497530

LEPA
Elongation factor 4

1

3

High-throughput

0.484

High

497535

CLPB
Chaperone protein ClpB

1

5

High-throughput

0.484

High

497527

YHHX
Uncharacterized oxidoreductase YhhX

1

0

High-throughput

0.479

High

497540

YQJI
Transcriptional regulator YqjI

1

0

High-throughput

0.479

High

497548

DCYD
D-cysteine desulfhydrase

1

0

High-throughput

0.479

High

497483

DBHA
DNA-binding protein HU-alpha

1

1

High-throughput

0.479

High

365871

DPO1
DNA polymerase I

1

0

High-throughput

0.464

High

490251

CLPP
ATP-dependent Clp protease proteolytic subunit

1

0

High-throughput

0.464

High

490336

HSLU
ATP-dependent protease ATPase subunit HslU

1

0

High-throughput

0.464

High

490669

FABZ
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ

1

0

High-throughput

0.464

High

490702

FIS
DNA-binding protein Fis

1

0

High-throughput

0.464

High

490774

RSMG
Ribosomal RNA small subunit methyltransferase G

1

0

High-throughput

0.464

High

490808

GREA
Transcription elongation factor GreA

1

0

High-throughput

0.464

High

491487

IF3
Translation initiation factor IF-3 [Cleaved into: Translation initiation factor IF-3, N-terminally processed; Translation initiation factor IF-3S]

1

0

High-throughput

0.464

High

491540

KDSA
2-dehydro-3-deoxyphosphooctonate aldolase

1

0

High-throughput

0.464

High

491929

RPPH
RNA pyrophosphohydrolase

1

0

High-throughput

0.464

High

491966

NUSB
Transcription antitermination protein NusB

1

0

High-throughput

0.464

High

492167

PTH
Peptidyl-tRNA hydrolase

1

0

High-throughput

0.464

High

492227

PYRH
Uridylate kinase

1

0

High-throughput

0.464

High

494601

RPOA
DNA-directed RNA polymerase subunit alpha

1

0

High-throughput

0.464

High

494882

TGT
Queuine tRNA-ribosyltransferase

1

0

High-throughput

0.464

High

495351

UVRC
UvrABC system protein C

1

0

High-throughput

0.464

High

496716

PHOL
PhoH-like protein

1

0

High-throughput

0.464

High

496864

PPIC
Peptidyl-prolyl cis-trans isomerase C

1

0

High-throughput

0.464

High

497479

DYR
Dihydrofolate reductase

1

0

High-throughput

0.464

High

497484

HSLR
Heat shock protein 15

1

0

High-throughput

0.464

High

497493

FUCM
L-fucose mutarotase

1

0

High-throughput

0.464

High

497494

SKP
Chaperone protein Skp

1

0

High-throughput

0.464

High

497495

PARC
DNA topoisomerase 4 subunit A

1

0

High-throughput

0.464

High

497499

RCSB
Transcriptional regulatory protein RcsB

1

0

High-throughput

0.464

High

497501

LPXB
Lipid-A-disaccharide synthase

1

0

High-throughput

0.464

High

497513

ISPA
Farnesyl diphosphate synthase

1

0

High-throughput

0.464

High

497517

GLMM
Phosphoglucosamine mutase

1

0

High-throughput

0.464

High

497521

RLMN
Dual-specificity RNA methyltransferase RlmN

1

0

High-throughput

0.464

High

497524

RSGA
Small ribosomal subunit biogenesis GTPase RsgA

1

0

High-throughput

0.464

High

497532

RISB
6,7-dimethyl-8-ribityllumazine synthase

1

0

High-throughput

0.464

High

497542

GNGF
Putative gluconeogenesis factor

1

0

High-throughput

0.464

High

458780

FDHF
Formate dehydrogenase H

1

0

High-throughput

0.458

High

495556

TMAR
Pole-localizer protein TmaR

1

0

High-throughput

0.458

High

495965

YFBU
UPF0304 protein YfbU

1

0

High-throughput

0.458

High

497477

PCNB
Poly(A) polymerase I

1

0

High-throughput

0.458

High

497481

KDSC
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase KdsC

1

0

High-throughput

0.458

High

497485

KPYK1
Pyruvate kinase I

1

0

High-throughput

0.458

High

497534

GMHBB
D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase

1

0

High-throughput

0.458

High

497541

CSRA
Carbon storage regulator

1

0

High-throughput

0.458

High

497544

RLMI
Ribosomal RNA large subunit methyltransferase I

1

0

High-throughput

0.458

High

497549

5DNU
5'-deoxynucleotidase YfbR

1

0

High-throughput

0.458

High

497552

YDJL
Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL

1

0

High-throughput

0.458

High

497554

MENI
1,4-dihydroxy-2-naphthoyl-CoA hydrolase

1

0

High-throughput

0.458

High

466610

ILVB
Acetolactate synthase isozyme 1 large subunit

1

1

High-throughput

0.442

High

497504

TOP3
DNA topoisomerase 3

1

2

High-throughput

0.442

High

497505

SRLR
Glucitol operon repressor

1

1

High-throughput

0.442

High

491606

KPRS
Ribose-phosphate pyrophosphokinase

1

0

High-throughput

0.426

High

494922

TIG
Trigger factor

1

0

Small-scale

0.426

High

497492

DCM
DNA-cytosine methyltransferase

2

0

High-throughput

0.313

High

497551

LYSAC
Peptidyl-lysine N-acetyltransferase PatZ

2

0

High-throughput

0.313

High

494558

RNPA
Ribonuclease P protein component

2

0

High-throughput

0.307

High

495266

YACL
UPF0231 protein YacL

2

0

High-throughput

0.307

High

495432

TRMB
tRNA

2

0

High-throughput

0.307

High

497486

FIMB
Type 1 fimbriae regulatory protein FimB

2

0

High-throughput

0.307

High

497526

YRAN
UPF0102 protein YraN

2

0

High-throughput

0.307

High

497531

LOLA
Outer-membrane lipoprotein carrier protein

2

0

High-throughput

0.307

High

497543

YBJX
Uncharacterized protein YbjX

2

0

High-throughput

0.307

High

497545

PAAX
Transcriptional repressor PaaX

2

0

High-throughput

0.307

High

497475

YCGL
Protein YcgL

1

0

High-throughput

0.279

Low

497539

YEET
Uncharacterized protein YeeT

1

0

High-throughput

0.279

Low

497480

EXBB
Biopolymer transport protein ExbB

1

0

High-throughput

0.261

Low

497488

YGGE
Uncharacterized protein YggE

1

0

High-throughput

0.261

Low

497522

WBBK
Putative glycosyltransferase WbbK

1

0

High-throughput

0.261

Low

497536

YDCL
Uncharacterized lipoprotein YdcL

1

0

High-throughput

0.261

Low

497538

YODC
Uncharacterized protein YodC

1

0

High-throughput

0.261

Low

497550

YFFL
Uncharacterized protein YffL

1

0

High-throughput

0.261

Low

492034

PLSB
Glycerol-3-phosphate acyltransferase

1

0

High-throughput

0.253

Low

497482

KDTA
3-deoxy-D-manno-octulosonic acid transferase

1

0

High-throughput

0.253

Low

497500

RCSA
Transcriptional regulatory protein RcsA

1

0

High-throughput

0.253

Low

497507

MURG
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase

1

0

High-throughput

0.253

Low

497514

RP54
RNA polymerase sigma-54 factor

1

0

High-throughput

0.253

Low

497516

HOLD
DNA polymerase III subunit psi

1

0

High-throughput

0.253

Low

497519

DUSC
tRNA-dihydrouridine(16) synthase

1

0

High-throughput

0.253

Low

393964

TONB
Protein TonB

1

0

High-throughput

0.249

Low

497476

ATPG
ATP synthase gamma chain

1

0

High-throughput

0.249

Low

497508

HYAE
Hydrogenase-1 operon protein HyaE

1

0

High-throughput

0.249

Low

497520

YADG
Uncharacterized ABC transporter ATP-binding protein YadG

1

0

High-throughput

0.249

Low

497525

YJJU
Uncharacterized protein YjjU

1

0

High-throughput

0.249

Low

497546

YNCE
Uncharacterized protein YncE

1

0

High-throughput

0.249

Low

497547

YEAO
Uncharacterized protein YeaO

1

0

High-throughput

0.249

Low

497553

YBAY
Uncharacterized lipoprotein YbaY

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025