Protein: LIMD1
LIM domain-containing protein 1

Gene: LIMD1
Organism: Homo sapiens
Interactions: 116
UniProt ID: Q9UGP4

Gene Ontology (top 5):
GO:0000932 - P-body
GO:0001666 - response to hypoxia
GO:0002076 - osteoblast development
GO:0003714 - transcription corepressor activity
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1151679

TRIP6
Thyroid receptor-interacting protein 6

3

20

High-throughput

0.861

High

253994

LPXN
Leupaxin

2

19

High-throughput

0.811

High

681944

RBTN2
Rhombotin-2

2

20

High-throughput

0.811

High

1447729

PDLI7
PDZ and LIM domain protein 7

2

19

High-throughput

0.811

High

718038

2AAA
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform

4

2

High-throughput

0.699

High

322521

ABLM3
Actin-binding LIM protein 3

1

19

High-throughput

0.691

High

1394171

AJUBA
LIM domain-containing protein ajuba

1

18

High-throughput

0.691

High

349281

LATS1
Serine/threonine-protein kinase LATS1

4

14

Small-scale

0.676

High

170406

AURKA
Aurora kinase A

3

8

High-throughput

0.667

High

1105675

GOGA4
Golgin subfamily A member 4

3

11

High-throughput

0.667

High

1364774

PHYIP
Phytanoyl-CoA hydroxylase-interacting protein

3

1

High-throughput

0.667

High

1387813

LEG12
Galectin-12

3

1

High-throughput

0.667

High

1054211

P2R3A
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha

3

6

High-throughput

0.662

High

1448701

LATS2
Serine/threonine-protein kinase LATS2

3

18

Small-scale

0.662

High

1108256

SQSTM
Sequestosome-1

3

14

Small-scale

0.640

High

1207907

S27A3
Long-chain fatty acid transport protein 3

3

0

High-throughput

0.634

High

1416790

TEKT3
Tektin-3

2

2

High-throughput

0.628

High

1434817

ZN576
Zinc finger protein 576

2

18

High-throughput

0.628

High

1459615

TRI35
E3 ubiquitin-protein ligase TRIM35

2

7

High-throughput

0.628

High

1438853

TANC2
Protein TANC2

1

10

High-throughput

0.618

High

878576

PAXI
Paxillin

1

17

High-throughput

0.618

High

896658

VASP
Vasodilator-stimulated phosphoprotein

1

15

High-throughput

0.618

High

1156239

ZYX
Zyxin

1

19

High-throughput

0.618

High

1157102

NTRK3
NT-3 growth factor receptor

1

13

High-throughput

0.618

High

1459608

LIMD1
LIM domain-containing protein 1

1

17

Small-scale

0.618

High

1257263

RFPLB
Ret finger protein-like 4B

2

8

High-throughput

0.611

High

1435410

EGLN3
Prolyl hydroxylase EGLN3

2

11

Small-scale

0.611

High

1459613

AGO2
Protein argonaute-2

1

7

Small-scale

0.586

High

822897

VHL
von Hippel-Lindau disease tumor suppressor

2

5

Small-scale

0.584

High

1149389

STIL
SCL-interrupting locus protein

2

1

High-throughput

0.584

High

1428879

EGLN1
Egl nine homolog 1

2

11

Small-scale

0.584

High

1418360

TMPSD
Transmembrane protease serine 13

2

0

High-throughput

0.576

High

335341

M3K6
Mitogen-activated protein kinase kinase kinase 6

2

3

High-throughput

0.574

High

1438146

ZFYV1
Zinc finger FYVE domain-containing protein 1

2

7

High-throughput

0.574

High

904406

BRCA2
Breast cancer type 2 susceptibility protein

1

1

Small-scale

0.573

High

1178691

RHG31
Rho GTPase-activating protein 31

2

16

High-throughput

0.571

High

1459614

AGO1
Protein argonaute-1

1

7

Small-scale

0.561

High

1459618

TRAF6
TNF receptor-associated factor 6

1

20

Small-scale

0.561

High

347392

BAG2
BAG family molecular chaperone regulator 2

1

4

High-throughput

0.536

High

1036699

APBA1
Amyloid-beta A4 precursor protein-binding family A member 1

1

10

High-throughput

0.536

High

1332575

TEX19
Testis-expressed protein 19

1

2

High-throughput

0.536

High

1448532

DISC1
Disrupted in schizophrenia 1 protein

1

1

High-throughput

0.536

High

1459609

PFD2
Prefoldin subunit 2

1

1

High-throughput

0.536

High

1459611

FBX10
F-box only protein 10

1

3

High-throughput

0.536

High

1436032

PHAX
Phosphorylated adapter RNA export protein

1

0

High-throughput

0.513

High

1459612

TF3C4
General transcription factor 3C polypeptide 4

1

0

High-throughput

0.513

High

1404633

STAC
SH3 and cysteine-rich domain-containing protein

1

20

High-throughput

0.508

High

1433058

HIPK3
Homeodomain-interacting protein kinase 3

1

11

High-throughput

0.508

High

423395

A4
Amyloid-beta precursor protein

1

9

High-throughput

0.501

High

1239093

CDPF1
Cysteine-rich DPF motif domain-containing protein 1

1

4

High-throughput

0.489

High

684425

DDX6
Probable ATP-dependent RNA helicase DDX6

1

2

Small-scale

0.484

High

173506

XPO1
Exportin-1

1

20

High-throughput

0.479

High

243207

PRKN
E3 ubiquitin-protein ligase parkin

1

17

High-throughput

0.479

High

278991

PEX14
Peroxisomal membrane protein PEX14

1

1

High-throughput

0.479

High

279530

TULP3
Tubby-related protein 3

1

1

High-throughput

0.479

High

318903

RHBT1
Rho-related BTB domain-containing protein 1

1

13

High-throughput

0.479

High

322768

RHBT3
Rho-related BTB domain-containing protein 3

1

13

Small-scale

0.479

High

346452

STAU1
Double-stranded RNA-binding protein Staufen homolog 1

1

9

High-throughput

0.479

High

363977

EGFR
Epidermal growth factor receptor

1

20

High-throughput

0.479

High

437380

K2C8
Keratin, type II cytoskeletal 8

1

3

High-throughput

0.479

High

475050

VIME
Vimentin

1

14

High-throughput

0.479

High

520641

RARA
Retinoic acid receptor alpha

1

20

Small-scale

0.479

High

589957

RFA2
Replication protein A 32 kDa subunit

1

4

High-throughput

0.479

High

609941

SPI1
Transcription factor PU.1

1

7

Small-scale

0.479

High

613481

VINC
Vinculin

1

20

High-throughput

0.479

High

696779

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

3

High-throughput

0.479

High

764462

CTNA1
Catenin alpha-1

1

17

High-throughput

0.479

High

765091

CTNB1
Catenin beta-1

1

9

High-throughput

0.479

High

769431

RFA3
Replication protein A 14 kDa subunit

1

3

High-throughput

0.479

High

831593

CCNF
Cyclin-F

1

6

High-throughput

0.479

High

833035

ETV6
Transcription factor ETV6

1

8

High-throughput

0.479

High

833383

PERI
Peripherin

1

14

High-throughput

0.479

High

891345

GSK3A
Glycogen synthase kinase-3 alpha

1

4

High-throughput

0.479

High

891856

GSK3B
Glycogen synthase kinase-3 beta

1

5

High-throughput

0.479

High

953159

ACTB
Actin, cytoplasmic 1

1

12

High-throughput

0.479

High

958215

ARP3
Actin-related protein 3

1

14

High-throughput

0.479

High

966985

1433G
14-3-3 protein gamma

1

12

High-throughput

0.479

High

971241

UBE2H
Ubiquitin-conjugating enzyme E2 H

1

3

High-throughput

0.479

High

986793

PPIA
Peptidyl-prolyl cis-trans isomerase A

1

3

High-throughput

0.479

High

989156

AP2B1
AP-2 complex subunit beta

1

3

High-throughput

0.479

High

1005214

RNF4
E3 ubiquitin-protein ligase RNF4

1

5

High-throughput

0.479

High

1049880

1433F
14-3-3 protein eta

1

12

High-throughput

0.479

High

1096849

RFA4
Replication protein A 30 kDa subunit

1

4

High-throughput

0.479

High

1114567

CUL3
Cullin-3

1

20

High-throughput

0.479

High

1197118

AMOT
Angiomotin

1

10

High-throughput

0.479

High

1203281

ODFP2
Outer dense fiber protein 2

1

5

High-throughput

0.479

High

1211022

CE170
Centrosomal protein of 170 kDa

1

9

High-throughput

0.479

High

1226307

CP135
Centrosomal protein of 135 kDa

1

4

High-throughput

0.479

High

1229122

RNF43
E3 ubiquitin-protein ligase RNF43

1

8

High-throughput

0.479

High

1252277

SYNE3
Nesprin-3

1

12

High-throughput

0.479

High

1255960

TRI67
Tripartite motif-containing protein 67

1

20

High-throughput

0.479

High

1276917

PARPT
Protein mono-ADP-ribosyltransferase TIPARP

1

3

High-throughput

0.479

High

1289689

NAA40
N-alpha-acetyltransferase 40

1

3

High-throughput

0.479

High

1294583

DZIP3
E3 ubiquitin-protein ligase DZIP3

1

11

Small-scale

0.479

High

1322805

CNTRB
Centrobin

1

10

High-throughput

0.479

High

1326372

NIN
Ninein

1

12

High-throughput

0.479

High

1333359

NHLC2
NHL repeat-containing protein 2

1

1

High-throughput

0.479

High

1350489

BICD2
Protein bicaudal D homolog 2

1

16

High-throughput

0.479

High

1367507

ESR2
Estrogen receptor beta

1

20

High-throughput

0.479

High

1391205

BICD1
Protein bicaudal D homolog 1

1

13

High-throughput

0.479

High

1396435

EGLN2
Prolyl hydroxylase EGLN2

1

11

Small-scale

0.479

High

1428998

WWTR1
WW domain-containing transcription regulator protein 1

1

20

High-throughput

0.479

High

1434153

PKHA4
Pleckstrin homology domain-containing family A member 4

1

20

High-throughput

0.479

High

1437072

AGO3
Protein argonaute-3

1

7

Small-scale

0.479

High

1439106

TNR6C
Trinucleotide repeat-containing gene 6C protein

1

10

High-throughput

0.479

High

1439208

AGO4
Protein argonaute-4

1

7

Small-scale

0.479

High

1459610

XPO7
Exportin-7

1

20

High-throughput

0.479

High

1459616

ADIP
Afadin- and alpha-actinin-binding protein

1

2

High-throughput

0.479

High

1459617

NINL
Ninein-like protein

1

11

High-throughput

0.479

High

1332912

KDF1
Keratinocyte differentiation factor 1

1

0

High-throughput

0.458

High

1336869

TNR6A
Trinucleotide repeat-containing gene 6A protein

1

11

Small-scale

0.445

High

1450964

KBTB4
Kelch repeat and BTB domain-containing protein 4

1

8

High-throughput

0.437

High

1325735

ZN843
Zinc finger protein 843

2

0

High-throughput

0.328

High

339199

CA105
Uncharacterized protein C1orf105

2

0

High-throughput

0.318

High

1383702

VP33A
Vacuolar protein sorting-associated protein 33A

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025