Protein: ZMYM3
Zinc finger MYM-type protein 3 (Zinc finger protein 261)

Gene: ZMYM3
Organism: Homo sapiens
Interactions: 126
UniProt ID: Q14202

Gene Ontology (top 5):
GO:0003677 - DNA binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0007010 - cytoskeleton organization
GO:0008270 - zinc ion binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1109716

HDAC1
Histone deacetylase 1

8

8

High-throughput

0.752

High

246596

KDM1A
Lysine-specific histone demethylase 1A

6

6

Small-scale

0.719

High

1123586

HDAC2
Histone deacetylase 2

5

8

Small-scale

0.712

High

991526

DYL1
Dynein light chain 1, cytoplasmic

4

8

High-throughput

0.697

High

1123618

RCOR1
REST corepressor 1

4

7

Small-scale

0.683

High

665591

AT5F1
ATP synthase peripheral stalk subunit b, mitochondrial

4

0

High-throughput

0.661

High

1123616

ZMYM2
Zinc finger MYM-type protein 2

3

5

High-throughput

0.656

High

1123590

DYL2
Dynein light chain 2, cytoplasmic

3

8

High-throughput

0.650

High

326409

ZN202
Zinc finger protein 202

2

15

High-throughput

0.628

High

1014096

CBX1
Chromobox protein homolog 1

2

15

High-throughput

0.628

High

1123579

TSYL6
Testis-specific Y-encoded-like protein 6

2

1

High-throughput

0.628

High

1123604

GAN
Gigaxonin

2

3

High-throughput

0.628

High

1123564

H2B2E
Histone H2B type 2-E

2

7

High-throughput

0.621

High

1097286

CBX3
Chromobox protein homolog 3

2

15

High-throughput

0.611

High

1123567

ZMYM4
Zinc finger MYM-type protein 4

2

5

High-throughput

0.611

High

1005865

GTF2I
General transcription factor II-I

2

5

Small-scale

0.608

High

964277

SUMO2
Small ubiquitin-related modifier 2

2

7

Small-scale

0.602

High

1123596

ZSA5A
Zinc finger and SCAN domain-containing protein 5A

2

16

High-throughput

0.601

High

372008

MYC
Myc proto-oncogene protein

2

6

High-throughput

0.584

High

979642

H4
Histone H4

2

2

High-throughput

0.584

High

1123560

CHD4
Chromodomain-helicase-DNA-binding protein 4

2

4

High-throughput

0.584

High

1123563

CNGA3
Cyclic nucleotide-gated channel alpha-3

2

1

High-throughput

0.574

High

1123565

PCKGM
Phosphoenolpyruvate carboxykinase [GTP], mitochondrial

2

4

High-throughput

0.574

High

1123597

MAD3
Max dimerization protein 3

2

4

High-throughput

0.574

High

396098

ESR1
Estrogen receptor

2

14

High-throughput

0.571

High

1123587

GGH
Gamma-glutamyl hydrolase

2

2

High-throughput

0.571

High

1123571

ABRX1
BRCA1-A complex subunit Abraxas 1

1

0

High-throughput

0.537

High

1123591

UIMC1
BRCA1-A complex subunit RAP80

1

0

High-throughput

0.537

High

188276

HDAC3
Histone deacetylase 3

1

7

High-throughput

0.536

High

340886

NFAC1
Nuclear factor of activated T-cells, cytoplasmic 1

1

3

High-throughput

0.536

High

466667

GLI1
Zinc finger protein GLI1

1

5

High-throughput

0.536

High

501983

H2AZ
Histone H2A.Z

1

5

High-throughput

0.536

High

601668

HMGA1
High mobility group protein HMG-I/HMG-Y

1

1

High-throughput

0.536

High

638193

S1PR1
Sphingosine 1-phosphate receptor 1

1

2

High-throughput

0.536

High

853254

CBX5
Chromobox protein homolog 5

1

15

Small-scale

0.536

High

937627

FOXG1
Forkhead box protein G1

1

4

High-throughput

0.536

High

1123561

NUMA1
Nuclear mitotic apparatus protein 1

1

1

High-throughput

0.536

High

1123566

RNH2B
Ribonuclease H2 subunit B

1

3

Small-scale

0.536

High

1123570

MDEAS
Mitotic deacetylase-associated SANT domain protein

1

7

High-throughput

0.536

High

1123576

FOXP4
Forkhead box protein P4

1

12

High-throughput

0.536

High

1123600

FOXQ1
Forkhead box protein Q1

1

3

High-throughput

0.536

High

1123603

NUCKS
Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1

1

1

High-throughput

0.536

High

1123613

FOXJ2
Forkhead box protein J2

1

7

High-throughput

0.536

High

1123615

HDAC6
Protein deacetylase HDAC6

1

8

High-throughput

0.536

High

1025345

CDK6
Cyclin-dependent kinase 6

1

0

Small-scale

0.527

High

966308

1433G
14-3-3 protein gamma

1

2

High-throughput

0.515

High

1123562

SETB1
Histone-lysine N-methyltransferase SETDB1

1

4

High-throughput

0.515

High

1123581

LMO3
LIM domain only protein 3

1

9

High-throughput

0.515

High

1123574

MD13L
Mediator of RNA polymerase II transcription subunit 13-like

1

0

High-throughput

0.513

High

422098

A4
Amyloid-beta precursor protein

1

2

High-throughput

0.501

High

991324

SUMO1
Small ubiquitin-related modifier 1

1

7

Small-scale

0.501

High

1099649

GRM1
Metabotropic glutamate receptor 1

1

0

High-throughput

0.493

High

1123612

ERAP1
Endoplasmic reticulum aminopeptidase 1

1

0

High-throughput

0.493

High

1123588

KAT5
Histone acetyltransferase KAT5

1

0

High-throughput

0.493

High

317722

NOL4
Nucleolar protein 4

1

2

High-throughput

0.489

High

572924

INSRR
Insulin receptor-related protein

1

2

High-throughput

0.489

High

1101484

GPR17
Uracil nucleotide/cysteinyl leukotriene receptor

1

1

High-throughput

0.489

High

129070

MEN1
Menin

1

2

High-throughput

0.479

High

190903

RPA34
DNA-directed RNA polymerase I subunit RPA34

1

4

High-throughput

0.479

High

209999

CRX
Cone-rod homeobox protein

1

10

High-throughput

0.479

High

277685

H2AY
Core histone macro-H2A.1

1

4

High-throughput

0.479

High

339743

KLF8
Krueppel-like factor 8

1

19

High-throughput

0.479

High

406173

MYCN
N-myc proto-oncogene protein

1

5

High-throughput

0.479

High

413819

P53
Cellular tumor antigen p53

1

5

High-throughput

0.479

High

418979

H2A1B
Histone H2A type 1-B/E

1

2

High-throughput

0.479

High

487304

PARP1
Poly [ADP-ribose] polymerase 1

1

7

High-throughput

0.479

High

588678

RFA2
Replication protein A 32 kDa subunit

1

2

High-throughput

0.479

High

591644

H2AX
Histone H2AX

1

4

High-throughput

0.479

High

675498

TYY1
Transcriptional repressor protein YY1

1

12

High-throughput

0.479

High

685192

PAX6
Paired box protein Pax-6

1

4

High-throughput

0.479

High

695437

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

3

High-throughput

0.479

High

714113

PML
Protein PML

1

8

High-throughput

0.479

High

754838

H2B1B
Histone H2B type 1-B

1

7

High-throughput

0.479

High

768171

RFA3
Replication protein A 14 kDa subunit

1

4

High-throughput

0.479

High

833938

HNF4A
Hepatocyte nuclear factor 4-alpha

1

11

High-throughput

0.479

High

883534

CENPA
Histone H3-like centromeric protein A

1

7

High-throughput

0.479

High

886852

CEBPA
CCAAT/enhancer-binding protein alpha

1

5

High-throughput

0.479

High

904703

MECP2
Methyl-CpG-binding protein 2

1

1

High-throughput

0.479

High

944652

KLF3
Krueppel-like factor 3

1

20

High-throughput

0.479

High

980761

H2B1C
Histone H2B type 1-C/E/F/G/I

1

7

High-throughput

0.479

High

998307

H31
Histone H3.1

1

7

High-throughput

0.479

High

1004556

RNF4
E3 ubiquitin-protein ligase RNF4

1

3

High-throughput

0.479

High

1016850

H33
Histone H3.3

1

7

High-throughput

0.479

High

1113087

CUL3
Cullin-3

1

4

High-throughput

0.479

High

1123573

TRI67
Tripartite motif-containing protein 67

1

1

High-throughput

0.479

High

1123575

PARPT
Protein mono-ADP-ribosyltransferase TIPARP

1

4

High-throughput

0.479

High

1123578

ZBTB2
Zinc finger and BTB domain-containing protein 2

1

6

High-throughput

0.479

High

1123580

NUP43
Nucleoporin Nup43

1

7

High-throughput

0.479

High

1123582

DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific

1

1

High-throughput

0.479

High

1123585

ESR2
Estrogen receptor beta

1

14

High-throughput

0.479

High

1123589

PF21A
PHD finger protein 21A

1

7

High-throughput

0.479

High

1123593

RING2
E3 ubiquitin-protein ligase RING2

1

2

High-throughput

0.479

High

1123594

FEV
Protein FEV

1

5

High-throughput

0.479

High

1123595

TBX5
T-box transcription factor TBX5

1

5

High-throughput

0.479

High

1123598

KLF16
Krueppel-like factor 16

1

15

High-throughput

0.479

High

1123606

SIR7
NAD-dependent protein deacetylase sirtuin-7

1

1

High-throughput

0.479

High

1123608

RAD18
E3 ubiquitin-protein ligase RAD18

1

1

High-throughput

0.479

High

1123611

TE2IP
Telomeric repeat-binding factor 2-interacting protein 1

1

3

High-throughput

0.479

High

1123614

RCOR3
REST corepressor 3

1

6

High-throughput

0.479

High

1123617

ZRAN1
Ubiquitin thioesterase ZRANB1

1

1

High-throughput

0.479

High

1123621

KLF12
Krueppel-like factor 12

1

19

High-throughput

0.479

High

342180

BRD1
Bromodomain-containing protein 1

1

0

High-throughput

0.458

High

507191

UBB
Polyubiquitin-B [Cleaved into: Ubiquitin]

1

0

High-throughput

0.458

High

1123610

BABA2
BRISC and BRCA1-A complex member 2

1

0

High-throughput

0.458

High

1123620

ZN330
Zinc finger protein 330

1

0

High-throughput

0.458

High

911244

IMA5
Importin subunit alpha-5

1

2

High-throughput

0.445

High

1123601

TGIF2
Homeobox protein TGIF2

1

2

High-throughput

0.445

High

1123609

S39A9
Zinc transporter ZIP9

1

1

High-throughput

0.445

High

1123572

LMBRL
Protein LMBR1L

1

1

High-throughput

0.437

High

1123577

RCOR2
REST corepressor 2

1

6

High-throughput

0.437

High

1123584

LPAR1
Lysophosphatidic acid receptor 1

1

2

High-throughput

0.437

High

1123605

PKHA4
Pleckstrin homology domain-containing family A member 4

1

2

High-throughput

0.437

High

1123607

DISC1
Disrupted in schizophrenia 1 protein

1

2

High-throughput

0.417

High

1123568

S27A4
Long-chain fatty acid transport protein 4

1

3

High-throughput

0.407

High

1123569

S27A1
Long-chain fatty acid transport protein 1

1

3

High-throughput

0.407

High

1123599

S17A9
Voltage-gated purine nucleotide uniporter SLC17A9

1

2

High-throughput

0.407

High

1123602

UN93B
Protein unc-93 homolog B1

1

2

High-throughput

0.407

High

1123619

PNMA2
Paraneoplastic antigen Ma2

1

1

High-throughput

0.407

High

567857

PRG2
Bone marrow proteoglycan

3

0

High-throughput

0.339

High

1123592

GPHA2
Glycoprotein hormone alpha-2

2

0

High-throughput

0.318

High

617513

ATP5J
ATP synthase peripheral stalk subunit F6, mitochondrial

2

0

High-throughput

0.313

High

1026998

REEP5
Receptor expression-enhancing protein 5

1

0

High-throughput

0.279

Low

167477

WNT9B
Protein Wnt-9b

1

0

High-throughput

0.269

Low

528395

TGFB3
Transforming growth factor beta-3 proprotein [Cleaved into: Latency-associated peptide

1

0

High-throughput

0.269

Low

929944

UBP14
Ubiquitin carboxyl-terminal hydrolase 14

1

0

High-throughput

0.249

Low

1123583

NUDC2
NudC domain-containing protein 2

1

0

High-throughput

0.249

Low


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Last updated: 11Aug2025