Protein: BAP60
Brahma-associated protein of 60 kDa (BRM-associated protein 60)

Gene: BAP60
Organism: Drosophila melanogaster
Interactions: 173
UniProt ID: Q9VYG2

Gene Ontology (top 5):
GO:0000791 - euchromatin
GO:0003677 - DNA binding
GO:0003712 - transcription coregulator activity
GO:0005634 - nucleus
GO:0006357 - regulation of transcription by RNA polymerase II

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1473451

Q9VF03
Brahma associated protein 155 kDa

4

18

Small-scale

0.893

High

674064

BRM
ATP-dependent helicase brm

9

17

Small-scale

0.748

High

1303634

OSA
Trithorax group protein osa

4

13

Small-scale

0.689

High

1171933

Q24090
GH08712p

4

5

Small-scale

0.680

High

1485418

AKIRN
Akirin

3

3

Small-scale

0.680

High

1268593

Q7KPY3
Moira

1

18

Small-scale

0.647

High

1488717

Q9W384
Brahma associated protein 111kD

2

9

Small-scale

0.624

High

58517

MED8
Mediator of RNA polymerase II transcription subunit 8

2

1

High-throughput

0.571

High

1019303

MED20
Mediator of RNA polymerase II transcription subunit 20

2

1

High-throughput

0.571

High

1263908

Q7K012
Brahma associated protein 55kD

2

16

High-throughput

0.571

High

1321585

MED6
Mediator of RNA polymerase II transcription subunit 6

2

1

High-throughput

0.571

High

1377807

EBI
F-box-like/WD repeat-containing protein ebi

2

1

High-throughput

0.571

High

1428005

MED10
Mediator of RNA polymerase II transcription subunit 10

2

1

High-throughput

0.571

High

1428113

MED7
Mediator of RNA polymerase II transcription subunit 7

2

2

High-throughput

0.571

High

1472617

MED17
Mediator of RNA polymerase II transcription subunit 17

2

1

High-throughput

0.571

High

1485346

MED4
Mediator of RNA polymerase II transcription subunit 4

2

2

High-throughput

0.571

High

1485612

CPSF6
Cleavage and polyadenylation specificity factor subunit 6

2

15

High-throughput

0.571

High

1485963

CDK8
Cyclin-dependent kinase 8

2

1

High-throughput

0.571

High

1488708

MED14
Mediator of RNA polymerase II transcription subunit 14

2

2

High-throughput

0.571

High

1488721

MED18
Mediator of RNA polymerase II transcription subunit 18

2

1

High-throughput

0.571

High

1488722

MED15
Mediator of RNA polymerase II transcription subunit 15

2

3

High-throughput

0.571

High

1343926

Q8SXP8
TAR DNA-binding protein 43

2

3

High-throughput

0.562

High

1487819

SAYP
Supporter of activation of yellow protein

1

17

Small-scale

0.554

High

900684

DSH
Segment polarity protein dishevelled

2

0

High-throughput

0.547

High

1261434

Q7JQT8
LD41464p

2

0

High-throughput

0.547

High

1267074

MED29
Mediator of RNA polymerase II transcription subunit 29

2

0

High-throughput

0.547

High

1480274

Q9VL29
GEO11246p1

2

0

High-throughput

0.547

High

1482745

MED27
Mediator of RNA polymerase II transcription subunit 27

2

0

High-throughput

0.547

High

1485576

MED24
Mediator of RNA polymerase II transcription subunit 24

2

0

High-throughput

0.547

High

1487436

MED11
Mediator of RNA polymerase II transcription subunit 11

2

0

High-throughput

0.547

High

1488707

MED30
Mediator of RNA polymerase II transcription subunit 30

2

0

High-throughput

0.547

High

1488712

MED23
Mediator of RNA polymerase II transcription subunit 23

2

0

High-throughput

0.547

High

1488715

MED16
Mediator of RNA polymerase II transcription subunit 16

2

0

High-throughput

0.547

High

1321528

ENC
Protein encore

2

3

High-throughput

0.521

High

1378950

Q960F7
SD03629p

2

1

High-throughput

0.521

High

1445611

SAN
Probable N-acetyltransferase san

2

1

High-throughput

0.521

High

1486603

Q9VUB7
PAX-interacting protein 1

2

7

High-throughput

0.521

High

1488706

Q9W0L7
ubiquitinyl hydrolase 1

2

1

High-throughput

0.521

High

232135

ESS2
Splicing factor ESS-2 homolog

1

1

High-throughput

0.508

High

355864

O96660
Mothers against decapentaplegic homolog

1

3

High-throughput

0.508

High

683189

ESCA
Protein escargot

1

1

High-throughput

0.508

High

824024

EXD
Homeobox protein extradenticle

1

4

High-throughput

0.508

High

912373

UBC84
Ubiquitin-conjugating enzyme E2-18 kDa

1

1

High-throughput

0.508

High

1050780

EYA
Protein phosphatase eya

1

5

High-throughput

0.508

High

1302204

TAD2B
Transcriptional adapter 2b

1

18

High-throughput

0.508

High

1470423

NUP98
Nuclear pore complex protein Nup98-Nup96

1

4

High-throughput

0.508

High

1472646

Q9VEC5
Importin-13

1

2

High-throughput

0.508

High

1473623

Q9VF74
Uncharacterized protein, isoform F

1

1

High-throughput

0.508

High

1474591

Q9VGD6
AT28509p

1

1

High-throughput

0.508

High

1478119

Q9VJ37
Insulin gene enhancer protein ISL-1

1

12

High-throughput

0.508

High

1488079

ARP8
Actin-related protein 8

1

10

High-throughput

0.508

High

1488610

Q9VY91
Programmed cell death protein 4

1

1

High-throughput

0.508

High

56139

APKC
Atypical protein kinase C

1

0

High-throughput

0.486

High

305750

IPYR
Inorganic pyrophosphatase

1

0

High-throughput

0.486

High

661993

PP2A
Serine/threonine-protein phosphatase PP2A

1

0

High-throughput

0.486

High

895410

RUX
Cell cycle negative regulator roughex

1

0

High-throughput

0.486

High

1469182

Q9VBI0
Pre-rRNA-processing protein TSR2 homolog

1

0

High-throughput

0.486

High

1469915

RPAB5
DNA-directed RNA polymerases I, II, and III subunit RPABC5

1

0

High-throughput

0.486

High

1476247

Q9VHJ7
LD41978p

1

0

High-throughput

0.486

High

1485131

Q9VRQ6
Uncharacterized protein, isoform A

1

0

High-throughput

0.486

High

1485249

Q9VRX7
LD29573p

1

0

High-throughput

0.486

High

1486884

MSH6
Probable DNA mismatch repair protein Msh6

1

0

High-throughput

0.486

High

1487988

Q9VWQ6
FI13061p

1

0

High-throughput

0.486

High

1488713

Q9W200
EF-hand domain-containing protein

1

0

High-throughput

0.486

High

1488714

Q9W224
Novel spermatogenesis regulator, isoform A

1

0

High-throughput

0.486

High

1475799

Q9VH81
protein-serine/threonine phosphatase

1

4

High-throughput

0.484

High

116690

H9XVM9
Uncharacterized protein, isoform L

1

1

High-throughput

0.481

High

873644

PP1B
Serine/threonine-protein phosphatase beta isoform

1

1

High-throughput

0.481

High

1355807

Q8WS79
Estrogen-related receptor splice variant

1

20

High-throughput

0.481

High

1377971

Q95SG9
5'-AMP-activated protein kinase subunit beta-1

1

1

High-throughput

0.481

High

1488711

Q9W1I0
TAR DNA-binding protein 43

1

3

High-throughput

0.481

High

1488723

X2JDN0
Ellipsoid body open, isoform B

1

4

High-throughput

0.481

High

57004

A1ZAK9
P-element somatic inhibitor, isoform A

1

1

High-throughput

0.479

High

263826

CLOCK
Circadian locomoter output cycles protein kaput

1

1

Small-scale

0.479

High

717034

SCAL
Protein scalloped

1

3

Small-scale

0.479

High

1445200

Q9N6D8
GH11591p

1

5

High-throughput

0.479

High

1469894

Q9VC36
Polybromo

1

20

Small-scale

0.479

High

1484624

Q9VR42
Serine/threonine-protein kinase RIO3

1

1

High-throughput

0.479

High

362531

SRC64
Tyrosine-protein kinase Src64B

1

1

High-throughput

0.464

High

832273

RL13
Large ribosomal subunit protein eL13

1

1

High-throughput

0.464

High

1377884

PAN3
PAN2-PAN3 deadenylation complex subunit PAN3

1

4

High-throughput

0.464

High

1378134

Q95TJ6
LP01469p

1

1

High-throughput

0.464

High

1466005

COG6
Conserved oligomeric Golgi complex subunit 6

1

1

High-throughput

0.464

High

1470302

Q9VCD5
UV excision repair protein RAD23

1

1

High-throughput

0.464

High

1473898

KIBRA
Protein kibra

1

5

High-throughput

0.464

High

1482420

Q9VN88
LD45836p

1

1

High-throughput

0.464

High

1484290

Q9VQK5
LD24714p

1

3

High-throughput

0.464

High

1488710

Q9W1H8
acetyl-CoA C-acyltransferase

1

1

High-throughput

0.464

High

119943

M9PBS1
Earmuff, isoform B

1

0

Small-scale

0.458

High

1064559

GAGA
Transcription activator GAGA

1

0

Small-scale

0.458

High

1173392

DIAP2
Death-associated inhibitor of apoptosis 2

1

0

High-throughput

0.458

High

1483804

Q9VQ58
BRCA2-interacting transcriptional repressor EMSY

1

0

High-throughput

0.458

High

1488705

SISA
Protein sisterless A

1

0

Small-scale

0.458

High

53411

A1Z7Q8
5'-AMP-activated protein kinase subunit beta-1

1

1

High-throughput

0.457

High

1303233

Q8IMB9
FI03013p

1

1

High-throughput

0.457

High

1485567

Q9VSE9
Estrogen-related receptor

1

20

High-throughput

0.457

High

1488720

Q9W5G1
Ellipsoid body open, isoform A

1

4

High-throughput

0.457

High

52103

A1Z6M0
Brahma associated protein 170kD

1

6

Small-scale

0.445

High

56961

A1ZAK7
LD35640p

1

1

High-throughput

0.445

High

84992

B7Z126
non-specific serine/threonine protein kinase

1

1

High-throughput

0.445

High

197493

O18353
CHIP

1

1

High-throughput

0.445

High

1269640

MED13
Mediator of RNA polymerase II transcription subunit 13

1

1

High-throughput

0.445

High

1409404

Q9BIW6
Brahma-associated protein 111kD

1

7

High-throughput

0.445

High

1471844

MED25
Mediator of RNA polymerase II transcription subunit 25

1

11

High-throughput

0.445

High

1472591

Q9VEB9
Sequence-specific single-stranded DNA-binding protein, isoform A

1

3

High-throughput

0.445

High

1487352

MED19
Mediator of RNA polymerase II transcription subunit 19

1

1

High-throughput

0.445

High

1487587

MED12
Mediator of RNA polymerase II transcription subunit 12

1

9

High-throughput

0.445

High

1488718

Q9W3G1
Uncharacterized protein, isoform A

1

10

High-throughput

0.445

High

52618

A1Z720
Uncharacterized protein, isoform A

1

1

High-throughput

0.439

High

58197

A1ZBG4
Uncharacterized protein, isoform E

1

1

High-throughput

0.439

High

121727

M9PG88
ADP-ribosylation factor GTPase activating protein 3, isoform F

1

1

High-throughput

0.439

High

122109

M9PHL4
IST1 homolog

1

1

High-throughput

0.439

High

1169500

Q1WWH6
RE42507p

1

1

Small-scale

0.439

High

1301131

Q8I0G8
FI16750p1

1

2

High-throughput

0.439

High

1304636

Q8IPL4
Lethal

1

1

High-throughput

0.439

High

1474257

Q9VG05
Uncharacterized protein, isoform H

1

5

High-throughput

0.439

High

518495

AST4
Achaete-scute complex protein T4

1

5

Small-scale

0.437

High

1463894

SEC13
Protein SEC13 homolog

1

2

Small-scale

0.437

High

1487894

Q9VWI2
N(Alpha)-acetyltransferase 15/16, isoform A

1

2

High-throughput

0.437

High

1302901

MED31
Mediator of RNA polymerase II transcription subunit 31

1

0

High-throughput

0.426

High

1374402

Q94513
Boundary element associated factor

1

0

Small-scale

0.426

High

1488716

Q9W2Y5
YLP motif-containing protein 1

1

0

High-throughput

0.426

High

52605

A1Z718
Uncharacterized protein, isoform D

1

1

High-throughput

0.417

High

58252

A1ZBG6
Uncharacterized protein, isoform C

1

1

High-throughput

0.417

High

356046

O96757
Dof protein

1

1

Small-scale

0.417

High

1303838

Q8INH9
Uncharacterized protein, isoform J

1

6

High-throughput

0.417

High

1345152

Q8T0F5
LD06023 isoform

1

1

High-throughput

0.417

High

1345520

Q8T0U6
Serine/threonine-protein phosphatase

1

1

High-throughput

0.417

High

1482199

Q9VMX2
LD03394p

1

1

High-throughput

0.417

High

1482886

Q9VNS2
ADP-ribosylation factor GTPase activating protein 3, isoform A

1

1

High-throughput

0.417

High

1485263

Q9VRY6
IST1 homolog

1

1

High-throughput

0.417

High

263256

TENM
Teneurin-m

1

1

High-throughput

0.407

High

1069942

Q0E996
Eukaryotic translation initiation factor 4 gamma 2

1

1

High-throughput

0.407

High

1346453

MESD
LDLR chaperone boca

2

0

High-throughput

0.298

High

1440708

LAR4
La-related protein Larp4B

2

0

High-throughput

0.298

High

1174808

MERH
Moesin/ezrin/radixin homolog 2

1

0

High-throughput

0.282

High

54819

A1Z8Z8
Uncharacterized protein

1

0

High-throughput

0.265

Low

58569

A1ZBU9
Bleomycin hydrolase

1

0

High-throughput

0.265

Low

72489

A9UN61
IP19013p

1

0

High-throughput

0.265

Low

234897

O46070
EG:25E8.4 protein

1

0

High-throughput

0.265

Low

475844

EF1A1
Elongation factor 1-alpha 1

1

0

High-throughput

0.265

Low

476211

MSRA
Peptide methionine sulfoxide reductase

1

0

High-throughput

0.265

Low

715178

CLH
Clathrin heavy chain

1

0

High-throughput

0.265

Low

1237063

Q6NP72
GEO09659p1

1

0

High-throughput

0.265

Low

1344641

Q8SYU0
Coiled-coil domain-containing protein 43

1

0

High-throughput

0.265

Low

1469909

Q9VC48
Methionine aminopeptidase

1

0

High-throughput

0.265

Low

1472339

Q9VE75
V-type proton ATPase subunit a

1

0

High-throughput

0.265

Low

1473832

Q9VFF0
Mitochondrial-processing peptidase subunit beta

1

0

High-throughput

0.265

Low

1473977

Q9VFM4
Uncharacterized protein, isoform A

1

0

High-throughput

0.265

Low

1475041

Q9VGP7
Large ribosomal subunit protein mL40

1

0

High-throughput

0.265

Low

1477586

Q9VIJ0
Glyoxylate reductase/hydroxypyruvate reductase

1

0

High-throughput

0.265

Low

1477812

Q9VIV8
Uncharacterized protein

1

0

High-throughput

0.265

Low

1484736

Q9VR90
Syntaxin 16

1

0

High-throughput

0.265

Low

1485435

Q9VS91
Gamma-tubulin complex component

1

0

High-throughput

0.265

Low

1485594

Q9VSG1
eIF-4F 25 kDa subunit

1

0

High-throughput

0.265

Low

1486070

BL1S2
Biogenesis of lysosome-related organelles complex 1 subunit 2

1

0

High-throughput

0.265

Low

1487054

Q9VV38
Phenoloxidase-activating factor 2

1

0

High-throughput

0.265

Low

1488377

Q9VXP3
GH05406p

1

0

High-throughput

0.265

Low

1488709

Q9W0V5
AT11049p

1

0

High-throughput

0.265

Low

1488719

VA0D1
V-type proton ATPase subunit d 1

1

0

High-throughput

0.265

Low

52898

A1Z7F1
alpha-glucosidase

1

0

High-throughput

0.251

Low

58617

FEM1B
Protein fem-1 homolog B

1

0

High-throughput

0.251

Low

68080

A8DY43
G-protein coupled receptors family 3 profile domain-containing protein

1

0

High-throughput

0.251

Low

1070709

Q0KHU0
Myosin 10A, isoform D

1

0

Small-scale

0.251

Low

1377540

Q95RF6
LD34461p

1

0

High-throughput

0.249

Low

1473991

Q9VFN9
GEO07882p1

1

0

High-throughput

0.249

Low

1487812

ELYS
Protein ELYS homolog

1

0

Small-scale

0.249

Low

1202403

7B2
Neuroendocrine protein 7B2

1

0

High-throughput

0.238

Low

1472435

RPB4
DNA-directed RNA polymerase II subunit Rpb4

1

0

High-throughput

0.238

Low

1484181

SNAPN
SNAPIN protein homolog

1

0

High-throughput

0.238

Low

53605

A1Z813
Secretory 24AB, isoform A

1

0

High-throughput

0.232

Low

84733

UNR
RNA-binding protein Unr

1

0

High-throughput

0.232

Low

1203054

Q5BIL9
SD21168p

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025