Protein: CCDC9
Coiled-coil domain-containing protein 9

Gene: CCDC9
Organism: Homo sapiens
Interactions: 87
UniProt ID: Q9Y3X0

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0035145 - exon-exon junction complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1197558

RALYL
RNA-binding Raly-like protein

3

1

High-throughput

0.667

High

263882

PR40A
Pre-mRNA-processing factor 40 homolog A

3

0

High-throughput

0.638

High

757811

IF4A3
Eukaryotic initiation factor 4A-III

3

0

High-throughput

0.638

High

1146460

AR6P4
ADP-ribosylation factor-like protein 6-interacting protein 4

3

0

High-throughput

0.638

High

1251095

SNIP1
Smad nuclear-interacting protein 1

3

0

High-throughput

0.638

High

1377544

LC7L2
Putative RNA-binding protein Luc7-like 2

3

0

High-throughput

0.638

High

948921

SARNP
SAP domain-containing ribonucleoprotein

2

0

High-throughput

0.602

High

1020356

ELAV2
ELAV-like protein 2

2

0

High-throughput

0.602

High

1329886

PININ
Pinin

2

0

High-throughput

0.602

High

1120502

NCBP3
Nuclear cap-binding protein subunit 3

2

0

High-throughput

0.576

High

1348668

WSB2
WD repeat and SOCS box-containing protein 2

2

1

High-throughput

0.574

High

231775

KIF1B
Kinesin-like protein KIF1B

2

1

High-throughput

0.549

High

172931

CASC3
Protein CASC3

1

1

High-throughput

0.536

High

216994

KIF1C
Kinesin-like protein KIF1C

1

1

High-throughput

0.536

High

433011

HNRPC
Heterogeneous nuclear ribonucleoproteins C1/C2

1

2

High-throughput

0.536

High

442627

RU17
U1 small nuclear ribonucleoprotein 70 kDa

1

1

High-throughput

0.536

High

952191

SRSF3
Serine/arginine-rich splicing factor 3

1

1

High-throughput

0.536

High

1070704

RNPS1
RNA-binding protein with serine-rich domain 1

1

1

High-throughput

0.536

High

1084465

SRSF7
Serine/arginine-rich splicing factor 7

1

2

High-throughput

0.536

High

1151858

THOC7
THO complex subunit 7 homolog

1

1

High-throughput

0.536

High

1310302

SRSF8
Serine/arginine-rich splicing factor 8

1

1

High-throughput

0.536

High

1146994

A16L1
Autophagy-related protein 16-1

2

1

High-throughput

0.533

High

127904

SAP18
Histone deacetylase complex subunit SAP18

1

0

High-throughput

0.513

High

181274

NUP42
Nucleoporin NUP42

1

0

High-throughput

0.513

High

256601

ZC11A
Zinc finger CCCH domain-containing protein 11A

1

0

High-throughput

0.513

High

751893

GRP75
Stress-70 protein, mitochondrial

1

0

High-throughput

0.513

High

834154

CLK3
Dual specificity protein kinase CLK3

1

0

High-throughput

0.513

High

968736

AK17A
A-kinase anchor protein 17A

1

0

High-throughput

0.513

High

1114397

TIM50
Mitochondrial import inner membrane translocase subunit TIM50

1

0

High-throughput

0.513

High

1162404

ZC3HE
Zinc finger CCCH domain-containing protein 14

1

0

High-throughput

0.513

High

1183155

MARK2
Serine/threonine-protein kinase MARK2

1

0

High-throughput

0.513

High

1199060

PABP2
Polyadenylate-binding protein 2

1

0

High-throughput

0.513

High

1300352

UIF
UAP56-interacting factor

1

0

High-throughput

0.513

High

1327230

PAIP1
Polyadenylate-binding protein-interacting protein 1

1

0

High-throughput

0.513

High

1377758

RBM8A
RNA-binding protein 8A

1

0

High-throughput

0.513

High

672365

2AAA
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform

1

1

High-throughput

0.489

High

672497

2AAB
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform

1

1

High-throughput

0.489

High

927908

2ABA
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform

1

1

High-throughput

0.489

High

1044894

AAMP
Angio-associated migratory cell protein

1

1

High-throughput

0.489

High

1146404

2ABD
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform

1

1

High-throughput

0.489

High

1318192

TBL1R
F-box-like/WD repeat-containing protein TBL1XR1

1

1

High-throughput

0.489

High

1046210

DX39B
Spliceosome RNA helicase DDX39B

1

2

High-throughput

0.479

High

792119

HD
Huntingtin

1

1

High-throughput

0.470

High

899587

MGN
Protein mago nashi homolog

1

0

High-throughput

0.458

High

1307074

ANM1
Protein arginine N-methyltransferase 1

1

0

High-throughput

0.458

High

1333027

TDRD3
Tudor domain-containing protein 3

1

0

High-throughput

0.458

High

999245

EP300
Histone acetyltransferase p300

1

1

High-throughput

0.437

High

1260967

DCAF4
DDB1- and CUL4-associated factor 4

1

1

High-throughput

0.437

High

718354

BMI1
Polycomb complex protein BMI-1

1

2

High-throughput

0.407

High

1354604

VTI1B
Vesicle transport through interaction with t-SNAREs homolog 1B

3

0

High-throughput

0.347

High

1172918

NKAP1
Uncharacterized protein NKAPD1

2

0

High-throughput

0.328

High

1377756

T184B
Transmembrane protein 184B

2

0

High-throughput

0.328

High

529951

CFTR
Cystic fibrosis transmembrane conductance regulator

1

0

High-throughput

0.296

High

1311264

TINF2
TERF1-interacting nuclear factor 2

1

0

High-throughput

0.296

High

869793

TERF1
Telomeric repeat-binding factor 1

1

0

High-throughput

0.282

High

1346265

POTE1
Protection of telomeres protein 1

1

0

High-throughput

0.282

High

131673

USP9Y
Ubiquitin carboxyl-terminal hydrolase 9Y

1

0

High-throughput

0.279

Low

780996

ID1
DNA-binding protein inhibitor ID-1

1

0

High-throughput

0.279

Low

817780

PI42A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha

1

0

High-throughput

0.279

Low

828069

UB2R1
Ubiquitin-conjugating enzyme E2 R1

1

0

High-throughput

0.279

Low

1045296

THOC5
THO complex subunit 5 homolog

1

0

High-throughput

0.279

Low

1198591

TAD2B
Transcriptional adapter 2-beta

1

0

High-throughput

0.279

Low

1246390

THOC2
THO complex subunit 2

1

0

High-throughput

0.279

Low

1288652

PABP5
Polyadenylate-binding protein 5

1

0

High-throughput

0.279

Low

1314473

HIRP3
HIRA-interacting protein 3

1

0

High-throughput

0.279

Low

1326648

NIF3L
NIF3-like protein 1

1

0

High-throughput

0.279

Low

1332201

STN1
CST complex subunit STN1

1

0

High-throughput

0.279

Low

1333629

TMT1A
Thiol S-methyltransferase TMT1A

1

0

High-throughput

0.279

Low

1334071

WDR54
WD repeat-containing protein 54

1

0

High-throughput

0.279

Low

1346828

TBCC1
TBCC domain-containing protein 1

1

0

High-throughput

0.279

Low

1347183

ARGL1
Arginine and glutamate-rich protein 1

1

0

High-throughput

0.279

Low

1356763

PNMA2
Paraneoplastic antigen Ma2

1

0

High-throughput

0.279

Low

1377397

AP3M1
AP-3 complex subunit mu-1

1

0

High-throughput

0.279

Low

1377757

P2R3B
Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta

1

0

High-throughput

0.279

Low

281962

WFS1
Wolframin

1

0

High-throughput

0.268

Low

1032707

CTBP1
C-terminal-binding protein 1

1

0

High-throughput

0.251

Low

1355985

HOOK1
Protein Hook homolog 1

1

0

High-throughput

0.251

Low

330036

AGR2
Anterior gradient protein 2 homolog

1

0

High-throughput

0.249

Low

380062

MYCN
N-myc proto-oncogene protein

1

0

High-throughput

0.249

Low

570219

CEBPB
CCAAT/enhancer-binding protein beta

1

0

High-throughput

0.249

Low

670297

MARCS
Myristoylated alanine-rich C-kinase substrate

1

0

Small-scale

0.249

Low

1057034

MDC1
Mediator of DNA damage checkpoint protein 1

1

0

High-throughput

0.249

Low

1080513

EZH2
Histone-lysine N-methyltransferase EZH2

1

0

High-throughput

0.249

Low

1354974

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.249

Low

135308

E2F3
Transcription factor E2F3

1

0

Small-scale

0.232

Low

1124669

ODFP2
Outer dense fiber protein 2

1

0

High-throughput

0.232

Low

1300701

MAGI1
Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024