Protein: RM03
Large ribosomal subunit protein uL3m (39S ribosomal protein L3, mitochondrial) (L3mt) (MRP-L3)

Gene: RM03, MRPL3
Organism: Homo sapiens
Interactions: 166
UniProt ID: P09001

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0003735 - structural constituent of ribosome
GO:0005739 - mitochondrion
GO:0005743 - mitochondrial inner membrane
GO:0005762 - mitochondrial large ribosomal subunit

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

477853

RM13
Large ribosomal subunit protein uL13m

2

6

High-throughput

0.776

High

477855

RM04
Large ribosomal subunit protein uL4m

4

3

High-throughput

0.694

High

477877

RM39
Large ribosomal subunit protein mL39

4

3

High-throughput

0.694

High

477759

RL13A
Large ribosomal subunit protein uL13

1

6

High-throughput

0.691

High

477869

RT30
Large ribosomal subunit protein mL65

4

1

High-throughput

0.691

High

477774

RS8
Small ribosomal subunit protein eS8

3

3

High-throughput

0.667

High

477790

RM28
Large ribosomal subunit protein bL28m

3

2

High-throughput

0.667

High

477868

RM47
Large ribosomal subunit protein uL29m

3

1

High-throughput

0.667

High

477771

RM12
Large ribosomal subunit protein bL12m

3

1

High-throughput

0.662

High

477776

YBOX1
Y-box-binding protein 1

3

11

Small-scale

0.662

High

477750

ROA1
Heterogeneous nuclear ribonucleoprotein A1

3

1

High-throughput

0.656

High

477793

ICT1
Large ribosomal subunit protein mL62

3

1

Small-scale

0.656

High

477859

RM18
Large ribosomal subunit protein uL18m

3

1

High-throughput

0.650

High

477823

RM50
Large ribosomal subunit protein mL50

3

0

High-throughput

0.646

High

477892

RM42
Large ribosomal subunit protein mL42

3

0

High-throughput

0.634

High

477768

RM19
Large ribosomal subunit protein bL19m

1

3

High-throughput

0.618

High

477831

RUSD4
Pseudouridylate synthase RPUSD4, mitochondrial

2

1

High-throughput

0.611

High

477858

RM37
Large ribosomal subunit protein mL37

2

1

High-throughput

0.611

High

421350

A4
Amyloid-beta precursor protein

2

1

High-throughput

0.602

High

477815

RM10
Large ribosomal subunit protein uL10m

2

0

High-throughput

0.602

High

477820

RM41
Large ribosomal subunit protein mL41

2

0

High-throughput

0.602

High

477881

RM27
Large ribosomal subunit protein bL27m

2

2

High-throughput

0.601

High

477819

HSC20
Iron-sulfur cluster co-chaperone protein HscB

2

0

High-throughput

0.585

High

477786

C1QBP
Complement component 1 Q subcomponent-binding protein, mitochondrial

2

1

Small-scale

0.584

High

477857

RT26
Small ribosomal subunit protein mS26

2

1

Small-scale

0.571

High

47948

RBM47
RNA-binding protein 47

1

2

High-throughput

0.536

High

446567

NPM
Nucleophosmin

1

2

High-throughput

0.536

High

477753

RL17
Large ribosomal subunit protein uL22

1

3

High-throughput

0.536

High

477755

RL13
Large ribosomal subunit protein eL13

1

3

High-throughput

0.536

High

477763

RL35
Large ribosomal subunit protein uL29

1

2

High-throughput

0.536

High

477773

RL37
Large ribosomal subunit protein eL37

1

2

High-throughput

0.536

High

477775

RL32
Large ribosomal subunit protein eL32

1

2

High-throughput

0.536

High

477779

RL19
Large ribosomal subunit protein eL19

1

2

High-throughput

0.536

High

477780

SRSF3
Serine/arginine-rich splicing factor 3

1

8

High-throughput

0.536

High

477782

HNRPU
Heterogeneous nuclear ribonucleoprotein U

1

2

High-throughput

0.536

High

477785

RL18
Large ribosomal subunit protein eL18

1

2

High-throughput

0.536

High

477792

HNRPD
Heterogeneous nuclear ribonucleoprotein D0

1

3

High-throughput

0.536

High

477798

RBMS2
RNA-binding motif, single-stranded-interacting protein 2

1

2

High-throughput

0.536

High

477799

RM23
Large ribosomal subunit protein uL23m

1

1

High-throughput

0.536

High

477800

SRSF7
Serine/arginine-rich splicing factor 7

1

6

High-throughput

0.536

High

477802

RM51
Large ribosomal subunit protein mL51

1

1

High-throughput

0.536

High

477804

RM02
Large ribosomal subunit protein uL2m

1

5

High-throughput

0.536

High

477816

RM52
Large ribosomal subunit protein mL52

1

1

High-throughput

0.536

High

477817

THOC4
THO complex subunit 4

1

4

High-throughput

0.536

High

477825

RM30
Large ribosomal subunit protein uL30m

1

1

High-throughput

0.536

High

477838

NAF1
H/ACA ribonucleoprotein complex non-core subunit NAF1

1

1

High-throughput

0.536

High

477854

RM09
Large ribosomal subunit protein bL9m

1

2

High-throughput

0.536

High

477856

RM01
Large ribosomal subunit protein uL1m

1

3

High-throughput

0.536

High

477861

RM46
Large ribosomal subunit protein mL46

1

2

High-throughput

0.536

High

477867

LN28A
Protein lin-28 homolog A

1

12

High-throughput

0.536

High

477871

SSF1
Suppressor of SWI4 1 homolog

1

2

High-throughput

0.536

High

477886

ZN346
Zinc finger protein 346

1

1

High-throughput

0.536

High

477887

ABT1
Activator of basal transcription 1

1

2

High-throughput

0.536

High

477888

YBOX2
Y-box-binding protein 2

1

11

High-throughput

0.536

High

477767

PAXI
Paxillin

2

1

High-throughput

0.521

High

477777

PRR3
Proline-rich protein 3

1

0

High-throughput

0.513

High

477810

FAHD1
Oxaloacetate tautomerase FAHD1, mitochondrial

1

0

High-throughput

0.513

High

477824

G45IP
Large ribosomal subunit protein mL64

1

0

High-throughput

0.513

High

477836

MASU1
Mitochondrial assembly of ribosomal large subunit protein 1

1

0

High-throughput

0.513

High

477837

RM53
Large ribosomal subunit protein mL53

1

0

High-throughput

0.513

High

477842

SCAFB
Protein SCAF11

1

0

High-throughput

0.513

High

477879

F120A
Constitutive coactivator of PPAR-gamma-like protein 1

1

0

High-throughput

0.513

High

477880

RM35
Large ribosomal subunit protein bL35m

1

0

High-throughput

0.513

High

477891

TIM13
Mitochondrial import inner membrane translocase subunit Tim13

1

0

High-throughput

0.513

High

221909

FOXS1
Forkhead box protein S1

1

4

High-throughput

0.489

High

276812

VATG1
V-type proton ATPase subunit G 1

1

1

High-throughput

0.489

High

302732

CIAO1
Probable cytosolic iron-sulfur protein assembly protein CIAO1

1

7

High-throughput

0.489

High

477751

H2A1
Histone H2A type 1

1

5

High-throughput

0.489

High

477754

H1T
Histone H1t

1

5

High-throughput

0.489

High

477770

CENPA
Histone H3-like centromeric protein A

1

2

High-throughput

0.489

High

477772

FOXL2
Forkhead box protein L2

1

4

High-throughput

0.489

High

477818

CAND1
Cullin-associated NEDD8-dissociated protein 1

1

2

High-throughput

0.489

High

477821

ZC3H3
Zinc finger CCCH domain-containing protein 3

1

2

High-throughput

0.489

High

477843

FOXB1
Forkhead box protein B1

1

4

High-throughput

0.489

High

61405

VWA8
von Willebrand factor A domain-containing protein 8

1

1

High-throughput

0.479

High

66114

MET15
12S rRNA N(4)-cytidine methyltransferase METTL15

1

1

High-throughput

0.479

High

183577

RT12
Small ribosomal subunit protein uS12m

1

3

High-throughput

0.479

High

240545

PRKN
E3 ubiquitin-protein ligase parkin

1

6

High-throughput

0.479

High

281859

MPPB
Mitochondrial-processing peptidase subunit beta

1

2

High-throughput

0.479

High

287226

RF1M
Peptide chain release factor 1, mitochondrial

1

2

High-throughput

0.479

High

350768

TRUB2
Pseudouridylate synthase TRUB2, mitochondrial

1

3

High-throughput

0.479

High

411223

NTRK1
High affinity nerve growth factor receptor

1

4

High-throughput

0.479

High

472410

RU17
U1 small nuclear ribonucleoprotein 70 kDa

1

3

High-throughput

0.479

High

477756

RL10
Large ribosomal subunit protein uL16

1

2

High-throughput

0.479

High

477757

LONM
Lon protease homolog, mitochondrial

1

3

High-throughput

0.479

High

477760

MDHM
Malate dehydrogenase, mitochondrial

1

1

High-throughput

0.479

High

477765

IF2M
Translation initiation factor IF-2, mitochondrial

1

4

High-throughput

0.479

High

477769

EFTU
Elongation factor Tu, mitochondrial

1

2

High-throughput

0.479

High

477784

SSBP
Single-stranded DNA-binding protein, mitochondrial

1

1

High-throughput

0.479

High

477787

MPPA
Mitochondrial-processing peptidase subunit alpha

1

2

High-throughput

0.479

High

477788

GRSF1
G-rich sequence factor 1

1

6

High-throughput

0.479

High

477789

NFX1
Transcriptional repressor NF-X1

1

2

High-throughput

0.479

High

477791

AUHM
Methylglutaconyl-CoA hydratase, mitochondrial

1

1

High-throughput

0.479

High

477796

TNIP1
TNFAIP3-interacting protein 1

1

5

High-throughput

0.479

High

477797

PDK1
[Pyruvate dehydrogenase

1

1

High-throughput

0.479

High

477801

LARP7
La-related protein 7

1

8

High-throughput

0.479

High

477806

RC3H1
Roquin-1

1

2

High-throughput

0.479

High

477808

MRM1
rRNA methyltransferase 1, mitochondrial

1

4

High-throughput

0.479

High

477814

ZCCHV
Zinc finger CCCH-type antiviral protein 1

1

3

High-throughput

0.479

High

477828

RL36L
Ribosomal protein eL42-like

1

2

High-throughput

0.479

High

477829

FAKD4
FAST kinase domain-containing protein 4

1

1

High-throughput

0.479

High

477833

RM38
Large ribosomal subunit protein mL38

1

1

High-throughput

0.479

High

477841

EFGM
Elongation factor G, mitochondrial

1

3

High-throughput

0.479

High

477844

ANM1
Protein arginine N-methyltransferase 1

1

1

High-throughput

0.479

High

477848

MTG1
Mitochondrial ribosome-associated GTPase 1

1

6

High-throughput

0.479

High

477850

TR61B
tRNA

1

1

High-throughput

0.479

High

477862

MTRFR
Mitochondrial translation release factor in rescue

1

3

High-throughput

0.479

High

477863

MTG2
Mitochondrial ribosome-associated GTPase 2

1

5

High-throughput

0.479

High

477873

EXD2
Exonuclease 3'-5' domain-containing protein 2

1

1

High-throughput

0.479

High

477876

AKIP
Small ribosomal subunit protein mS38

1

1

High-throughput

0.479

High

477878

FAKD2
FAST kinase domain-containing protein 2, mitochondrial

1

1

High-throughput

0.479

High

477883

UBP36
Ubiquitin carboxyl-terminal hydrolase 36

1

3

High-throughput

0.479

High

477884

RF1ML
Peptide chain release factor 1-like, mitochondrial

1

3

High-throughput

0.479

High

477889

RM11
Large ribosomal subunit protein uL11m

1

1

High-throughput

0.479

High

477890

NOC2L
Nucleolar complex protein 2 homolog

1

2

High-throughput

0.479

High

279620

CISY
Citrate synthase, mitochondrial

1

0

High-throughput

0.458

High

477752

CH60
60 kDa heat shock protein, mitochondrial

1

0

High-throughput

0.458

High

477758

SYUA
Alpha-synuclein

1

0

High-throughput

0.458

High

477762

LPPRC
Leucine-rich PPR motif-containing protein, mitochondrial

1

0

High-throughput

0.458

High

477764

EFTS
Elongation factor Ts, mitochondrial

1

0

High-throughput

0.458

High

477766

PRC2A
Protein PRRC2A

1

0

High-throughput

0.458

High

477826

RT27
Small ribosomal subunit protein mS27

1

0

High-throughput

0.458

High

477830

CHCH1
Small ribosomal subunit protein mS37

1

0

High-throughput

0.458

High

477832

FMT
Methionyl-tRNA formyltransferase, mitochondrial

1

0

High-throughput

0.458

High

477834

RRFM
Ribosome-recycling factor, mitochondrial

1

0

High-throughput

0.458

High

477835

MTEF3
Transcription termination factor 3, mitochondrial

1

0

High-throughput

0.458

High

477840

TEFM
Transcription elongation factor, mitochondrial

1

0

High-throughput

0.458

High

477846

TACO1
Translational activator of cytochrome c oxidase 1

1

0

High-throughput

0.458

High

477847

CQ080
Mitochondrial nucleoid-associated protein 1

1

0

High-throughput

0.458

High

477849

TMM70
Transmembrane protein 70, mitochondrial

1

0

High-throughput

0.458

High

477851

HINT2
Adenosine 5'-monophosphoramidase HINT2

1

0

High-throughput

0.458

High

477860

IF3M
Translation initiation factor IF-3, mitochondrial

1

0

High-throughput

0.458

High

477865

MET17
Ribosome assembly protein METTL17, mitochondrial

1

0

High-throughput

0.458

High

477866

ACAD9
Complex I assembly factor ACAD9, mitochondrial

1

0

High-throughput

0.458

High

477870

NGRN
Neugrin

1

0

High-throughput

0.458

High

477875

MCUB
Calcium uniporter regulatory subunit MCUb, mitochondrial

1

0

High-throughput

0.458

High

477882

MRES1
Mitochondrial transcription rescue factor 1

1

0

High-throughput

0.458

High

477783

ERCC6
DNA excision repair protein ERCC-6

1

4

High-throughput

0.457

High

477781

TFAM
Transcription factor A, mitochondrial

1

4

High-throughput

0.445

High

477805

ATD3B
ATPase family AAA domain-containing protein 3B

1

5

High-throughput

0.445

High

477852

RM20
Large ribosomal subunit protein bL20m

1

1

High-throughput

0.445

High

477874

ATD3A
ATPase family AAA domain-containing protein 3A

1

5

High-throughput

0.445

High

65464

PCARE
Photoreceptor cilium actin regulator

1

1

High-throughput

0.437

High

315039

RECQ4
ATP-dependent DNA helicase Q4

1

4

High-throughput

0.437

High

330595

KI20A
Kinesin-like protein KIF20A

1

5

High-throughput

0.437

High

370981

MYC
Myc proto-oncogene protein

1

4

High-throughput

0.437

High

405703

MYCN
N-myc proto-oncogene protein

1

4

High-throughput

0.437

High

477761

CCNF
Cyclin-F

1

2

High-throughput

0.437

High

477778

RHOG
Rho-related GTP-binding protein RhoG

1

1

High-throughput

0.437

High

477794

NBR1
Next to BRCA1 gene 1 protein

1

1

High-throughput

0.437

High

477795

EMC2
ER membrane protein complex subunit 2

1

2

High-throughput

0.437

High

477803

WIPI1
WD repeat domain phosphoinositide-interacting protein 1

1

7

Small-scale

0.437

High

477807

Q6ICH2
single-stranded DNA cytosine deaminase

1

2

High-throughput

0.437

High

477812

TRI67
Tripartite motif-containing protein 67

1

4

High-throughput

0.437

High

477822

FBXL6
F-box/LRR-repeat protein 6

1

1

High-throughput

0.437

High

477827

KAT6A
Histone acetyltransferase KAT6A

1

4

High-throughput

0.437

High

477839

CI072
Guanine nucleotide exchange factor C9orf72

1

1

High-throughput

0.437

High

477845

RIOK1
Serine/threonine-protein kinase RIO1

1

2

High-throughput

0.437

High

477864

PKHA4
Pleckstrin homology domain-containing family A member 4

1

1

High-throughput

0.437

High

477872

CYLD
Ubiquitin carboxyl-terminal hydrolase CYLD

1

1

High-throughput

0.437

High

477885

ZRAN1
Ubiquitin thioesterase ZRANB1

1

1

High-throughput

0.437

High

73368

B2CML4
single-stranded DNA cytosine deaminase

1

2

High-throughput

0.407

High

442976

PTMA
Prothymosin alpha [Cleaved into: Prothymosin alpha, N-terminally processed; Thymosin alpha-1]

1

0

High-throughput

0.279

Low

477813

H1FNT
Testis-specific H1 histone

1

0

High-throughput

0.279

Low

477811

BAKOR
Beclin 1-associated autophagy-related key regulator

1

0

High-throughput

0.249

Low

477809

NPAL3
NIPA-like protein 3

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025