Protein: RBM47
RNA-binding protein 47 (RNA-binding motif protein 47)

Gene: RBM47
Organism: Homo sapiens
Interactions: 201
UniProt ID: A0AV96

Gene Ontology (top 5):
GO:0000381 - regulation of alternative mRNA splicing, via spliceosome
GO:0002244 - hematopoietic progenitor cell differentiation
GO:0003723 - RNA binding
GO:0003729 - mRNA binding
GO:0003730 - mRNA 3'-UTR binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

47924

IF2B3
Insulin-like growth factor 2 mRNA-binding protein 3

2

20

High-throughput

0.789

High

48010

LARP4
La-related protein 4

2

20

High-throughput

0.789

High

48119

IF2B2
Insulin-like growth factor 2 mRNA-binding protein 2

2

20

High-throughput

0.789

High

48028

CELF5
CUGBP Elav-like family member 5

2

20

High-throughput

0.783

High

48093

RFOX1
RNA binding protein fox-1 homolog 1

2

18

High-throughput

0.783

High

48108

KCC2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha

2

0

High-throughput

0.742

High

47947

HNRPC
Heterogeneous nuclear ribonucleoproteins C1/C2

1

20

High-throughput

0.691

High

47953

HNRPL
Heterogeneous nuclear ribonucleoprotein L

1

19

High-throughput

0.691

High

47967

PRR3
Proline-rich protein 3

1

4

High-throughput

0.691

High

47975

NCBP1
Nuclear cap-binding protein subunit 1

1

5

High-throughput

0.691

High

47976

ELAV2
ELAV-like protein 2

1

19

High-throughput

0.691

High

48004

LAR1B
La-related protein 1B

1

20

High-throughput

0.691

High

48009

LARP1
La-related protein 1

1

20

High-throughput

0.691

High

48019

RBM45
RNA-binding protein 45

1

19

High-throughput

0.691

High

48033

ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1

1

17

High-throughput

0.691

High

48034

RBM46
Probable RNA-binding protein 46

1

17

High-throughput

0.691

High

48039

DYRK2
Dual specificity tyrosine-phosphorylation-regulated kinase 2

1

11

High-throughput

0.691

High

48047

RMXL1
RNA binding motif protein, X-linked-like-1

1

18

High-throughput

0.691

High

48056

ZFR
Zinc finger RNA-binding protein

1

14

High-throughput

0.691

High

48114

RBM19
Probable RNA-binding protein 19

1

19

High-throughput

0.691

High

48005

Z385C
Zinc finger protein 385C

1

2

High-throughput

0.665

High

47931

MSI1H
RNA-binding protein Musashi homolog 1

1

18

High-throughput

0.618

High

47935

CSDE1
Cold shock domain-containing protein E1

1

2

High-throughput

0.618

High

47938

CELF2
CUGBP Elav-like family member 2

1

19

High-throughput

0.618

High

47939

PTBP3
Polypyrimidine tract-binding protein 3

1

15

High-throughput

0.618

High

47944

RAF1
RAF proto-oncogene serine/threonine-protein kinase

1

9

High-throughput

0.618

High

47949

PABP1
Polyadenylate-binding protein 1

1

17

High-throughput

0.618

High

47957

RBMS1
RNA-binding motif, single-stranded-interacting protein 1

1

19

High-throughput

0.618

High

47962

HNRPF
Heterogeneous nuclear ribonucleoprotein F

1

17

High-throughput

0.618

High

47973

TIAR
Nucleolysin TIAR

1

16

High-throughput

0.618

High

47977

PABP4
Polyadenylate-binding protein 4

1

16

High-throughput

0.618

High

47989

RBMS2
RNA-binding motif, single-stranded-interacting protein 2

1

19

High-throughput

0.618

High

47990

ELAV1
ELAV-like protein 1

1

15

High-throughput

0.618

High

48000

TUT4
Terminal uridylyltransferase 4

1

3

High-throughput

0.618

High

48002

MBNL2
Muscleblind-like protein 2

1

2

High-throughput

0.618

High

48021

Z3H7A
Zinc finger CCCH domain-containing protein 7A

1

6

High-throughput

0.618

High

48024

RAVR1
Ribonucleoprotein PTB-binding 1

1

17

High-throughput

0.618

High

48038

LAR4B
La-related protein 4B

1

20

High-throughput

0.618

High

48042

CELF1
CUGBP Elav-like family member 1

1

20

High-throughput

0.618

High

48044

DAZL
Deleted in azoospermia-like

1

18

High-throughput

0.618

High

48045

RBPMS
RNA-binding protein with multiple splicing

1

3

High-throughput

0.618

High

48050

DAZP1
DAZ-associated protein 1

1

18

High-throughput

0.618

High

48069

MKRN2
E3 ubiquitin-protein ligase makorin-2

1

18

High-throughput

0.618

High

48080

RC3H2
Roquin-2

1

13

High-throughput

0.618

High

48085

A1CF
APOBEC1 complementation factor

1

17

High-throughput

0.618

High

48086

MBNL1
Muscleblind-like protein 1

1

2

High-throughput

0.618

High

48098

IF2B1
Insulin-like growth factor 2 mRNA-binding protein 1

1

20

High-throughput

0.618

High

48105

G3BP2
Ras GTPase-activating protein-binding protein 2

1

18

High-throughput

0.618

High

47925

P3C2A
Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha

2

3

High-throughput

0.611

High

47983

PUM1
Pumilio homolog 1

2

9

High-throughput

0.611

High

48032

PUM2
Pumilio homolog 2

2

9

High-throughput

0.611

High

48043

RENT1
Regulator of nonsense transcripts 1

2

12

High-throughput

0.611

High

48063

ATX2
Ataxin-2

2

16

High-throughput

0.611

High

48097

F120A
Constitutive coactivator of PPAR-gamma-like protein 1

2

7

High-throughput

0.611

High

47958

OTX2
Homeobox protein OTX2

2

2

High-throughput

0.606

High

47964

PCBP3
Poly(rC)-binding protein 3

2

20

High-throughput

0.606

High

48007

CA094
Uncharacterized protein C1orf94

3

1

High-throughput

0.597

High

47959

HELZ
Probable helicase with zinc finger domain

1

12

High-throughput

0.575

High

48096

PRR13
Proline-rich protein 13

2

1

High-throughput

0.553

High

47927

CTRO
Citron Rho-interacting kinase

1

12

High-throughput

0.553

High

47934

PTCD1
Pentatricopeptide repeat-containing protein 1, mitochondrial

1

1

High-throughput

0.536

High

47941

TRUB2
Pseudouridylate synthase TRUB2, mitochondrial

1

3

High-throughput

0.536

High

47948

RM03
Large ribosomal subunit protein uL3m

1

2

High-throughput

0.536

High

47965

RS6
Small ribosomal subunit protein eS6

1

2

High-throughput

0.536

High

47966

RS27A
Ubiquitin-ribosomal protein eS31 fusion protein

1

7

High-throughput

0.536

High

47969

RT05
Small ribosomal subunit protein uS5m

1

4

High-throughput

0.536

High

47970

RT11
Small ribosomal subunit protein uS11m

1

2

High-throughput

0.536

High

47971

RT09
Small ribosomal subunit protein uS9m

1

3

High-throughput

0.536

High

47978

ATM
Serine-protein kinase ATM

1

4

High-throughput

0.536

High

47979

PICAL
Phosphatidylinositol-binding clathrin assembly protein

1

1

High-throughput

0.536

High

48011

DHX30
ATP-dependent RNA helicase DHX30

1

8

High-throughput

0.536

High

48015

NOP9
Nucleolar protein 9

1

10

High-throughput

0.536

High

48020

ABC3F
DNA dC->dU-editing enzyme APOBEC-3F

1

17

High-throughput

0.536

High

48023

SUGP2
SURP and G-patch domain-containing protein 2

1

1

High-throughput

0.536

High

48036

LMO7
LIM domain only protein 7

1

4

High-throughput

0.536

High

48049

RT24
Small ribosomal subunit protein uS3m

1

1

High-throughput

0.536

High

48051

TRI11
E3 ubiquitin-protein ligase TRIM11

1

4

High-throughput

0.536

High

48053

CPNE2
Copine-2

1

3

High-throughput

0.536

High

48055

RCC1L
RCC1-like G exchanging factor-like protein

1

3

High-throughput

0.536

High

48058

YTDC1
YTH domain-containing protein 1

1

16

High-throughput

0.536

High

48068

RT26
Small ribosomal subunit protein mS26

1

2

High-throughput

0.536

High

48070

EPN3
Epsin-3

1

2

High-throughput

0.536

High

48079

RM44
Large ribosomal subunit protein mL44

1

3

High-throughput

0.536

High

48081

MOV10
Helicase MOV-10

1

12

High-throughput

0.536

High

48084

NGRN
Neugrin

1

1

High-throughput

0.536

High

48089

ZCHC3
Zinc finger CCHC domain-containing protein 3

1

7

High-throughput

0.536

High

48090

STAU2
Double-stranded RNA-binding protein Staufen homolog 2

1

17

High-throughput

0.536

High

48091

DDX28
Probable ATP-dependent RNA helicase DDX28

1

5

High-throughput

0.536

High

48095

FAKD2
FAST kinase domain-containing protein 2, mitochondrial

1

1

High-throughput

0.536

High

48099

RM15
Large ribosomal subunit protein uL15m

1

1

High-throughput

0.536

High

48101

ABC3B
DNA dC->dU-editing enzyme APOBEC-3B

1

17

High-throughput

0.536

High

48102

SRP68
Signal recognition particle subunit SRP68

1

2

High-throughput

0.536

High

48103

HERC5
E3 ISG15--protein ligase HERC5

1

11

High-throughput

0.536

High

47932

SYNJ1
Synaptojanin-1

1

0

High-throughput

0.513

High

47952

PIP
Prolactin-inducible protein

1

0

High-throughput

0.513

High

47956

RL17
Large ribosomal subunit protein uL22

1

0

High-throughput

0.513

High

47996

ZN326
DBIRD complex subunit ZNF326

1

0

High-throughput

0.513

High

48006

RUSD3
Mitochondrial mRNA pseudouridine synthase RPUSD3

1

0

High-throughput

0.513

High

48026

SUV3
ATP-dependent RNA helicase SUPV3L1, mitochondrial

1

0

High-throughput

0.513

High

48075

PHAX
Phosphorylated adapter RNA export protein

1

0

High-throughput

0.513

High

48076

PAAT
ATPase PAAT

1

0

High-throughput

0.513

High

48111

RT07
Small ribosomal subunit protein uS7m

1

0

High-throughput

0.513

High

48112

SYYM
Tyrosine--tRNA ligase, mitochondrial

1

0

High-throughput

0.513

High

48118

RM42
Large ribosomal subunit protein mL42

1

0

High-throughput

0.513

High

47937

EPN2
Epsin-2

1

3

High-throughput

0.489

High

47987

RBP1
RalA-binding protein 1

1

6

High-throughput

0.489

High

48025

M21D2
Nucleotidyltransferase MB21D2

1

1

High-throughput

0.489

High

48046

MTEF3
Transcription termination factor 3, mitochondrial

1

2

High-throughput

0.489

High

48048

MASU1
Mitochondrial assembly of ribosomal large subunit protein 1

1

1

High-throughput

0.489

High

48109

RT33
Small ribosomal subunit protein mS33

1

1

High-throughput

0.489

High

47954

ZEP1
Zinc finger protein 40

1

3

High-throughput

0.481

High

47919

MEX3A
RNA-binding protein MEX3A

1

20

High-throughput

0.479

High

47923

MCRI1
Mapk-regulated corepressor-interacting protein 1

1

3

High-throughput

0.479

High

47926

NFIB
Nuclear factor 1 B-type

1

1

High-throughput

0.479

High

47930

CASC3
Protein CASC3

1

7

High-throughput

0.479

High

47942

TOP3B
DNA topoisomerase 3-beta-1

1

2

High-throughput

0.479

High

47945

TYSY
Thymidylate synthase

1

1

High-throughput

0.479

High

47946

ADT2
ADP/ATP translocase 2

1

4

High-throughput

0.479

High

47951

ADT3
ADP/ATP translocase 3

1

5

High-throughput

0.479

High

47955

RS2
Small ribosomal subunit protein uS5

1

4

High-throughput

0.479

High

47960

PRC2A
Protein PRRC2A

1

19

High-throughput

0.479

High

47972

VIGLN
Vigilin

1

20

High-throughput

0.479

High

47974

OTUD4
OTU domain-containing protein 4

1

8

High-throughput

0.479

High

47980

CUL3
Cullin-3

1

20

High-throughput

0.479

High

47981

UBP2L
Ubiquitin-associated protein 2-like

1

10

High-throughput

0.479

High

47982

EI2BA
Translation initiation factor eIF2B subunit alpha

1

1

High-throughput

0.479

High

47984

NFIX
Nuclear factor 1 X-type

1

4

High-throughput

0.479

High

47985

R3HD1
R3H domain-containing protein 1

1

9

High-throughput

0.479

High

47986

KIF14
Kinesin-like protein KIF14

1

7

High-throughput

0.479

High

47988

PCBP1
Poly(rC)-binding protein 1

1

20

High-throughput

0.479

High

47992

CPEB4
Cytoplasmic polyadenylation element-binding protein 4

1

17

High-throughput

0.479

High

47993

LSM12
Protein LSM12

1

4

High-throughput

0.479

High

47994

FND3B
Fibronectin type III domain-containing protein 3B

1

7

High-throughput

0.479

High

47997

PRC2B
Protein PRRC2B

1

17

High-throughput

0.479

High

47999

UBAP2
Ubiquitin-associated protein 2

1

8

High-throughput

0.479

High

48001

RC3H1
Roquin-1

1

11

High-throughput

0.479

High

48012

YTHD3
YTH domain-containing family protein 3

1

16

High-throughput

0.479

High

48013

PATL1
Protein PAT1 homolog 1

1

3

High-throughput

0.479

High

48017

DTX2
Probable E3 ubiquitin-protein ligase DTX2

1

1

High-throughput

0.479

High

48018

MEX3D
RNA-binding protein MEX3D

1

17

High-throughput

0.479

High

48022

ANKH1
Ankyrin repeat and KH domain-containing protein 1

1

6

High-throughput

0.479

High

48030

LS14A
Protein LSM14 homolog A

1

6

High-throughput

0.479

High

48035

SMAP2
Stromal membrane-associated protein 2

1

2

High-throughput

0.479

High

48037

SMG7
Nonsense-mediated mRNA decay factor SMG7

1

4

High-throughput

0.479

High

48040

AKAP1
A-kinase anchor protein 1, mitochondrial

1

5

High-throughput

0.479

High

48054

FUBP3
Far upstream element-binding protein 3

1

20

High-throughput

0.479

High

48059

QKI
KH domain-containing RNA-binding protein QKI

1

11

High-throughput

0.479

High

48061

SEBP2
Selenocysteine insertion sequence-binding protein 2

1

2

High-throughput

0.479

High

48062

RING2
E3 ubiquitin-protein ligase RING2

1

16

High-throughput

0.479

High

48066

MCRI2
MAPK regulated corepressor interacting protein 2

1

3

High-throughput

0.479

High

48067

YTHD1
YTH domain-containing family protein 1

1

16

High-throughput

0.479

High

48071

SMRCD
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1

1

12

High-throughput

0.479

High

48072

BICC1
Protein bicaudal C homolog 1

1

20

High-throughput

0.479

High

48073

ESRP2
Epithelial splicing regulatory protein 2

1

17

High-throughput

0.479

High

48074

TDRD3
Tudor domain-containing protein 3

1

2

High-throughput

0.479

High

48077

ECT2
Protein ECT2

1

6

High-throughput

0.479

High

48087

4ET
Eukaryotic translation initiation factor 4E transporter

1

1

High-throughput

0.479

High

48100

SEC63
Translocation protein SEC63 homolog

1

3

High-throughput

0.479

High

48104

AGO2
Protein argonaute-2

1

9

High-throughput

0.479

High

48106

TNR6B
Trinucleotide repeat-containing gene 6B protein

1

5

High-throughput

0.479

High

48107

SMG5
Nonsense-mediated mRNA decay factor SMG5

1

4

High-throughput

0.479

High

48110

R3HD2
R3H domain-containing protein 2

1

6

High-throughput

0.479

High

48116

PRC2C
Protein PRRC2C

1

15

High-throughput

0.479

High

48117

YTHD2
YTH domain-containing family protein 2

1

17

High-throughput

0.479

High

47922

B7ZLH0
FAM22F protein

1

1

High-throughput

0.470

High

47933

PFD1
Prefoldin subunit 1

1

0

High-throughput

0.458

High

48014

PEG10
Retrotransposon-derived protein PEG10

1

0

High-throughput

0.458

High

48027

ZCH24
Zinc finger CCHC domain-containing protein 24

1

0

High-throughput

0.458

High

48064

TBA1C
Tubulin alpha-1C chain

1

0

High-throughput

0.458

High

48041

ESR2
Estrogen receptor beta

1

19

High-throughput

0.445

High

47920

NTM2F
NUT family member 2F

1

1

High-throughput

0.439

High

48057

HSFY1
Heat shock transcription factor, Y-linked

1

1

High-throughput

0.439

High

47940

FADS2
Acyl-CoA 6-desaturase

1

1

High-throughput

0.437

High

47943

INS
Insulin [Cleaved into: Insulin B chain; Insulin A chain]

1

1

High-throughput

0.437

High

47950

ADT1
ADP/ATP translocase 1

1

3

High-throughput

0.437

High

47963

UCP3
Putative mitochondrial transporter UCP3

1

5

Small-scale

0.437

High

48003

FBW10
F-box/WD repeat-containing protein 10

1

14

High-throughput

0.437

High

48008

CEP85
Centrosomal protein of 85 kDa

1

11

High-throughput

0.437

High

48016

N4BP2
NEDD4-binding protein 2

1

2

High-throughput

0.437

High

48083

ALG13
UDP-N-acetylglucosamine transferase subunit ALG13

1

8

High-throughput

0.437

High

48088

SYIM
Isoleucine--tRNA ligase, mitochondrial

1

1

High-throughput

0.437

High

48094

RM16
Large ribosomal subunit protein uL16m

1

1

High-throughput

0.437

High

48113

RT02
Small ribosomal subunit protein uS2m

1

1

High-throughput

0.437

High

47995

KLH22
Kelch-like protein 22

1

0

High-throughput

0.426

High

47998

CJ055
Uncharacterized protein C10orf55

2

0

High-throughput

0.316

High

47968

RT25
Small ribosomal subunit protein mS25

1

0

High-throughput

0.279

Low

48052

STALP
AMSH-like protease

1

0

High-throughput

0.279

Low

48092

RT18A
Large ribosomal subunit protein mL66

1

0

High-throughput

0.279

Low

47921

NUD19
Acyl-coenzyme A diphosphatase NUDT19

1

0

High-throughput

0.249

Low

47928

ACOT8
Acyl-coenzyme A thioesterase 8

1

0

High-throughput

0.249

Low

47929

SCAM3
Secretory carrier-associated membrane protein 3

1

0

High-throughput

0.249

Low

47936

ATP5L
ATP synthase F(0) complex subunit g, mitochondrial

1

0

High-throughput

0.249

Low

47961

PTSS1
Phosphatidylserine synthase 1

1

0

High-throughput

0.249

Low

47991

CLPP
ATP-dependent Clp protease proteolytic subunit, mitochondrial

1

0

High-throughput

0.249

Low

48029

UBAC2
Ubiquitin-associated domain-containing protein 2

1

0

High-throughput

0.249

Low

48031

NUP35
Nucleoporin NUP35

1

0

High-throughput

0.249

Low

48060

TM209
Transmembrane protein 209

1

0

High-throughput

0.249

Low

48065

DERL1
Derlin-1

1

0

High-throughput

0.249

Low

48078

SFXN1
Sideroflexin-1

1

0

High-throughput

0.249

Low

48082

TM9S3
Transmembrane 9 superfamily member 3

1

0

High-throughput

0.249

Low

48115

FARP1
FERM, ARHGEF and pleckstrin domain-containing protein 1

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025