Protein: KLF9
Krueppel-like factor 9 (Basic transcription element-binding protein 1) (BTE-binding protein 1) (GC-box-binding protein 1) (Transcription factor BTEB1)

Gene: KLF9
Organism: Homo sapiens
Interactions: 91
UniProt ID: Q13886

Gene Ontology (top 5):
GO:0000785 - chromatin
GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0003700 - DNA-binding transcription factor activity
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

229326

ZBT14
Zinc finger and BTB domain-containing protein 14

1

18

High-throughput

0.618

High

464953

SP1
Transcription factor Sp1

1

18

Small-scale

0.618

High

586293

ZEP1
Zinc finger protein 40

1

20

High-throughput

0.618

High

675495

TYY1
Transcriptional repressor protein YY1

1

18

High-throughput

0.618

High

886482

CTCF
Transcriptional repressor CTCF

1

18

High-throughput

0.618

High

1095335

RLF
Zinc finger protein Rlf

1

20

High-throughput

0.618

High

1118665

ZKSC4
Zinc finger protein with KRAB and SCAN domains 4

1

20

High-throughput

0.618

High

1118668

ZN512
Zinc finger protein 512

1

18

High-throughput

0.618

High

1118683

ZN644
Zinc finger protein 644

1

18

High-throughput

0.618

High

1118699

ZN148
Zinc finger protein 148

1

19

High-throughput

0.618

High

1118672

SIN3A
Paired amphipathic helix protein Sin3a

2

10

Small-scale

0.595

High

442936

PRGR
Progesterone receptor

1

20

Small-scale

0.573

High

447753

TPM3
Tropomyosin alpha-3 chain

1

12

High-throughput

0.500

High

967720

PP1A
Serine/threonine-protein phosphatase PP1-alpha catalytic subunit

1

6

High-throughput

0.500

High

977005

CNBP
CCHC-type zinc finger nucleic acid binding protein

1

4

High-throughput

0.500

High

1118671

ERBIN
Erbin

1

3

High-throughput

0.500

High

1118703

STRAP
Serine-threonine kinase receptor-associated protein

1

20

High-throughput

0.500

High

1027334

DHSO
Sorbitol dehydrogenase

1

0

High-throughput

0.479

High

96678

E9PAV9
G patch domain-containing protein 4

1

7

High-throughput

0.479

High

175037

SC16A
Protein transport protein Sec16A

1

11

High-throughput

0.479

High

274325

SIN3B
Paired amphipathic helix protein Sin3b

1

10

High-throughput

0.479

High

282712

E2F6
Transcription factor E2F6

1

11

High-throughput

0.479

High

425493

ISG15
Ubiquitin-like protein ISG15

1

3

Small-scale

0.479

High

559757

NR2C1
Nuclear receptor subfamily 2 group C member 1

1

20

High-throughput

0.479

High

598081

AT2A2
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2

1

4

High-throughput

0.479

High

703314

SMCA1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1

1

16

High-throughput

0.479

High

711765

ARI4A
AT-rich interactive domain-containing protein 4A

1

20

High-throughput

0.479

High

841358

RBM34
RNA-binding protein 34

1

10

High-throughput

0.479

High

879070

NR2C2
Nuclear receptor subfamily 2 group C member 2

1

20

High-throughput

0.479

High

913768

ZN131
Zinc finger protein 131

1

20

High-throughput

0.479

High

926353

BLM
RecQ-like DNA helicase BLM

1

7

High-throughput

0.479

High

941158

IF6
Eukaryotic translation initiation factor 6

1

1

High-throughput

0.479

High

959577

MAX
Protein max

1

20

High-throughput

0.479

High

1013990

RL36A
Large ribosomal subunit protein eL42

1

8

High-throughput

0.479

High

1017418

FOXK1
Forkhead box protein K1

1

14

High-throughput

0.479

High

1055598

GABPA
GA-binding protein alpha chain

1

20

High-throughput

0.479

High

1092534

ECH1
Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial

1

1

High-throughput

0.479

High

1098228

DDX10
Probable ATP-dependent RNA helicase DDX10

1

9

High-throughput

0.479

High

1101809

SKP2
S-phase kinase-associated protein 2

1

11

Small-scale

0.479

High

1112286

PWP1
Periodic tryptophan protein 1 homolog

1

20

High-throughput

0.479

High

1118649

NPAT
Protein NPAT

1

2

High-throughput

0.479

High

1118650

RRP5
Protein RRP5 homolog

1

4

High-throughput

0.479

High

1118652

GON4L
GON-4-like protein

1

1

High-throughput

0.479

High

1118653

ARI4B
AT-rich interactive domain-containing protein 4B

1

20

High-throughput

0.479

High

1118654

BRM1L
Breast cancer metastasis-suppressor 1-like protein

1

12

High-throughput

0.479

High

1118655

ARID2
AT-rich interactive domain-containing protein 2

1

20

High-throughput

0.479

High

1118656

CDCA2
Cell division cycle-associated protein 2

1

2

High-throughput

0.479

High

1118657

EMSY
BRCA2-interacting transcriptional repressor EMSY

1

20

High-throughput

0.479

High

1118658

PB1
Protein polybromo-1

1

14

High-throughput

0.479

High

1118659

MGAP
MAX gene-associated protein

1

13

High-throughput

0.479

High

1118661

SPB1
pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3

1

9

High-throughput

0.479

High

1118663

GATD1
GATA zinc finger domain-containing protein 1

1

5

High-throughput

0.479

High

1118664

BBX
HMG box transcription factor BBX

1

19

High-throughput

0.479

High

1118667

EHMT2
Histone-lysine N-methyltransferase EHMT2

1

20

High-throughput

0.479

High

1118669

ATAD5
ATPase family AAA domain-containing protein 5

1

8

High-throughput

0.479

High

1118670

PHF12
PHD finger protein 12

1

20

High-throughput

0.479

High

1118673

MNT
Max-binding protein MNT

1

20

High-throughput

0.479

High

1118676

PHF23
PHD finger protein 23

1

1

High-throughput

0.479

High

1118678

GTPB4
GTP-binding protein 4

1

6

High-throughput

0.479

High

1118680

SP130
Histone deacetylase complex subunit SAP130

1

16

High-throughput

0.479

High

1118681

ING2
Inhibitor of growth protein 2

1

19

High-throughput

0.479

High

1118684

SDS3
Sin3 histone deacetylase corepressor complex component SDS3

1

12

High-throughput

0.479

High

1118685

BRMS1
Breast cancer metastasis-suppressor 1

1

12

High-throughput

0.479

High

1118686

SHCAF
SIN3-HDAC complex-associated factor

1

3

High-throughput

0.479

High

1118687

BRD7
Bromodomain-containing protein 7

1

20

High-throughput

0.479

High

1118690

NOP53
Ribosome biogenesis protein NOP53

1

6

High-throughput

0.479

High

1118692

BAZ1B
Tyrosine-protein kinase BAZ1B

1

20

High-throughput

0.479

High

1118693

ING1
Inhibitor of growth protein 1

1

20

High-throughput

0.479

High

1118695

INO80
Chromatin-remodeling ATPase INO80

1

19

High-throughput

0.479

High

1118696

CHIP
E3 ubiquitin-protein ligase CHIP

1

8

Small-scale

0.479

High

1118698

PHF8
Histone lysine demethylase PHF8

1

9

High-throughput

0.479

High

1118700

FBW1A
F-box/WD repeat-containing protein 1A

1

13

Small-scale

0.479

High

1118702

NOP16
Nucleolar protein 16

1

5

High-throughput

0.479

High

230604

TLL1
Tolloid-like protein 1

1

0

High-throughput

0.458

High

760911

GLYM
Serine hydroxymethyltransferase, mitochondrial

1

0

High-throughput

0.458

High

880300

RL34
Large ribosomal subunit protein eL34

1

0

High-throughput

0.458

High

1118651

BMS1
Ribosome biogenesis protein BMS1 homolog

1

0

High-throughput

0.458

High

1118660

ANKH1
Ankyrin repeat and KH domain-containing protein 1

1

3

High-throughput

0.457

High

1118682

CPVL
Probable serine carboxypeptidase CPVL

1

4

High-throughput

0.457

High

1118662

KRI1
Protein KRI1 homolog

1

3

High-throughput

0.437

High

1118666

DDX27
Probable ATP-dependent RNA helicase DDX27

1

9

High-throughput

0.437

High

1118674

EBP2
Probable rRNA-processing protein EBP2

1

3

High-throughput

0.437

High

1118675

CHOLN
Protein cholesin

1

5

High-throughput

0.437

High

1118677

NUSAP
Nucleolar and spindle-associated protein 1

1

1

High-throughput

0.437

High

1118679

DDX24
ATP-dependent RNA helicase DDX24

1

10

High-throughput

0.437

High

1118688

DDX18
ATP-dependent RNA helicase DDX18

1

16

High-throughput

0.437

High

1118689

RBM28
RNA-binding protein 28

1

6

High-throughput

0.437

High

1118691

S18L2
SS18-like protein 2

1

1

High-throughput

0.437

High

1118694

MRT4
mRNA turnover protein 4 homolog

1

5

High-throughput

0.437

High

1118697

RL26L
Ribosomal protein uL24-like

1

9

High-throughput

0.437

High

1118701

RM11
Large ribosomal subunit protein uL11m

1

2

High-throughput

0.437

High


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Last updated: 11Aug2025