Protein: CTCF
Transcriptional repressor CTCF (11-zinc finger protein) (CCCTC-binding factor) (CTCFL paralog)

Gene: CTCF
Organism: Homo sapiens
Interactions: 408
UniProt ID: P49711

Gene Ontology (top 5):
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0000775 - chromosome, centromeric region
GO:0000793 - condensed chromosome
GO:0000976 - transcription cis-regulatory region binding
GO:0000978 - RNA polymerase II cis-regulatory region sequence-specific DNA binding

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

886435

SRPK2
SRSF protein kinase 2

2

9

High-throughput

0.776

High

487083

PARP1
Poly [ADP-ribose] polymerase 1

5

3

Small-scale

0.717

High

886421

RL31
Large ribosomal subunit protein eL31

5

2

Small-scale

0.716

High

446771

NPM
Nucleophosmin

5

9

Small-scale

0.714

High

824049

RL13A
Large ribosomal subunit protein uL13

4

4

Small-scale

0.699

High

517627

ZBT48
Zinc finger and BTB domain-containing protein 48

1

13

High-throughput

0.691

High

517741

GLI4
Zinc finger protein GLI4

1

18

High-throughput

0.691

High

886538

NEK7
Serine/threonine-protein kinase Nek7

1

7

High-throughput

0.691

High

886556

AURKB
Aurora kinase B

1

4

High-throughput

0.691

High

886560

ZN668
Zinc finger protein 668

1

10

High-throughput

0.691

High

886564

SRPK1
SRSF protein kinase 1

1

8

High-throughput

0.691

High

886574

ZNF2
Zinc finger protein 2

1

12

High-throughput

0.691

High

886577

KLF16
Krueppel-like factor 16

1

18

High-throughput

0.691

High

886590

LATS2
Serine/threonine-protein kinase LATS2

1

1

High-throughput

0.691

High

615674

RL17
Large ribosomal subunit protein uL22

4

6

Small-scale

0.691

High

886494

PUM3
Pumilio homolog 3

3

2

High-throughput

0.675

High

658039

RS3
Small ribosomal subunit protein uS3

3

2

Small-scale

0.667

High

860085

RS9
Small ribosomal subunit protein uS4

3

1

Small-scale

0.667

High

886399

RS16
Small ribosomal subunit protein uS9

3

6

Small-scale

0.667

High

886409

RS6
Small ribosomal subunit protein eS6

3

4

High-throughput

0.667

High

886424

RL11
Large ribosomal subunit protein uL5

3

3

Small-scale

0.667

High

886448

RL19
Large ribosomal subunit protein eL19

3

4

Small-scale

0.667

High

809532

RS19
Small ribosomal subunit protein eS19

3

3

High-throughput

0.662

High

886373

RL14
Large ribosomal subunit protein eL14

5

3

Small-scale

0.654

High

686027

RL13
Large ribosomal subunit protein eL13

3

5

High-throughput

0.650

High

886457

H11
Histone H1.1

3

14

High-throughput

0.650

High

886606

KLF15
Krueppel-like factor 15

1

19

High-throughput

0.646

High

886490

SUZ12
Polycomb protein SUZ12

3

0

Small-scale

0.643

High

643730

FBRL
rRNA 2'-O-methyltransferase fibrillarin

3

3

Small-scale

0.640

High

667211

RPB1
DNA-directed RNA polymerase II subunit RPB1

2

1

Small-scale

0.639

High

859146

RL5
Large ribosomal subunit protein uL18

3

0

Small-scale

0.638

High

886397

RS8
Small ribosomal subunit protein eS8

3

0

High-throughput

0.634

High

886391

RL26
Large ribosomal subunit protein uL24

3

5

Small-scale

0.633

High

428649

RLA0
Large ribosomal subunit protein uL10

2

2

High-throughput

0.628

High

476600

RSSA
Small ribosomal subunit protein uS2

2

3

High-throughput

0.628

High

521589

H14
Histone H1.4

2

14

High-throughput

0.628

High

591533

H2AX
Histone H2AX

2

6

High-throughput

0.628

High

612556

RL7
Large ribosomal subunit protein uL30

2

4

High-throughput

0.628

High

785013

RL4
Large ribosomal subunit protein uL4

2

3

High-throughput

0.628

High

886406

RL7A
Large ribosomal subunit protein eL8

2

3

High-throughput

0.628

High

886408

RL23A
Large ribosomal subunit protein uL23

2

3

High-throughput

0.628

High

886419

RL30
Large ribosomal subunit protein eL30

2

3

High-throughput

0.628

High

886422

RL10A
Large ribosomal subunit protein uL1

2

5

High-throughput

0.628

High

886474

ILF3
Interleukin enhancer-binding factor 3

2

9

High-throughput

0.628

High

886509

ZMYM1
Zinc finger MYM-type protein 1

2

3

High-throughput

0.628

High

886521

ZCCHV
Zinc finger CCCH-type antiviral protein 1

2

3

High-throughput

0.628

High

886537

ZCRB1
Zinc finger CCHC-type and RNA-binding motif-containing protein 1

2

6

High-throughput

0.628

High

886569

MBB1A
Myb-binding protein 1A

2

1

High-throughput

0.628

High

886588

DDX21
Nucleolar RNA helicase 2

2

7

High-throughput

0.628

High

693603

RL10
Large ribosomal subunit protein uL16

3

0

Small-scale

0.628

High

210177

IRAK2
Interleukin-1 receptor-associated kinase-like 2

1

1

Small-scale

0.618

High

339686

KLF8
Krueppel-like factor 8

1

20

High-throughput

0.618

High

400482

RAF1
RAF proto-oncogene serine/threonine-protein kinase

1

3

High-throughput

0.618

High

675415

TYY1
Transcriptional repressor protein YY1

1

18

Small-scale

0.618

High

881490

CDK8
Cyclin-dependent kinase 8

1

1

Small-scale

0.618

High

886370

CTCF
Transcriptional repressor CTCF

1

13

Small-scale

0.618

High

886482

KLF9
Krueppel-like factor 9

1

18

High-throughput

0.618

High

886533

ZBTB2
Zinc finger and BTB domain-containing protein 2

1

15

High-throughput

0.618

High

886628

KLF12
Krueppel-like factor 12

1

19

High-throughput

0.618

High

418884

H2A1B
Histone H2A type 1-B/E

2

5

High-throughput

0.611

High

542384

TOP2A
DNA topoisomerase 2-alpha

2

1

Small-scale

0.611

High

586581

RS2
Small ribosomal subunit protein uS5

2

1

Small-scale

0.611

High

620206

NUCL
Nucleolin

2

3

Small-scale

0.611

High

809970

RL3
Large ribosomal subunit protein uL3

2

5

High-throughput

0.611

High

840644

RS27
Small ribosomal subunit protein eS27

2

1

Small-scale

0.611

High

860442

RS5
Small ribosomal subunit protein uS7

2

1

Small-scale

0.611

High

886378

HNRPM
Heterogeneous nuclear ribonucleoprotein M

2

5

Small-scale

0.611

High

886387

RS20
Small ribosomal subunit protein uS10

2

1

Small-scale

0.611

High

886415

RS24
Small ribosomal subunit protein eS24

2

1

Small-scale

0.611

High

886429

RACK1
Small ribosomal subunit protein RACK1

2

3

Small-scale

0.611

High

886470

DHX9
ATP-dependent RNA helicase A

2

2

Small-scale

0.611

High

886500

H2A2C
Histone H2A type 2-C

2

5

Small-scale

0.611

High

886503

LARP7
La-related protein 7

2

7

High-throughput

0.611

High

886513

IFIX
Pyrin and HIN domain-containing protein 1

2

3

High-throughput

0.611

High

886558

PRR11
Proline-rich protein 11

2

1

High-throughput

0.611

High

859743

RL28
Large ribosomal subunit protein eL28

3

6

Small-scale

0.609

High

886458

RL18A
Large ribosomal subunit protein eL20

3

1

Small-scale

0.609

High

345164

ZMYM6
Zinc finger MYM-type protein 6

2

3

High-throughput

0.606

High

886475

TRAF2
TNF receptor-associated factor 2

2

14

High-throughput

0.606

High

842269

RL35
Large ribosomal subunit protein uL29

2

0

High-throughput

0.602

High

886425

RL8
Large ribosomal subunit protein uL2

2

0

High-throughput

0.602

High

886544

RT27
Small ribosomal subunit protein mS27

2

0

High-throughput

0.602

High

886554

PTCD3
Small ribosomal subunit protein mS39

2

0

High-throughput

0.602

High

191569

MAGB2
Melanoma-associated antigen B2

2

4

High-throughput

0.601

High

886487

SMC1A
Structural maintenance of chromosomes protein 1A

2

1

Small-scale

0.601

High

886579

MK67I
MKI67 FHA domain-interacting nucleolar phosphoprotein

2

5

High-throughput

0.601

High

886585

LN28A
Protein lin-28 homolog A

2

14

High-throughput

0.601

High

886612

ZN346
Zinc finger protein 346

2

3

High-throughput

0.601

High

886547

DDX17
Probable ATP-dependent RNA helicase DDX17

2

2

Small-scale

0.600

High

886451

VIGLN
Vigilin

1

1

Small-scale

0.586

High

886586

CHD8
Chromodomain-helicase-DNA-binding protein 8

1

5

Small-scale

0.586

High

880251

RL34
Large ribosomal subunit protein eL34

2

0

Small-scale

0.585

High

886393

RL27
Large ribosomal subunit protein eL27

2

0

Small-scale

0.585

High

886398

RS15A
Small ribosomal subunit protein uS8

2

0

Small-scale

0.585

High

886400

RS14
Small ribosomal subunit protein uS11

2

0

Small-scale

0.585

High

886401

RS23
Small ribosomal subunit protein uS12

2

0

Small-scale

0.585

High

886404

RS13
Small ribosomal subunit protein uS15

2

0

Small-scale

0.585

High

886405

RS11
Small ribosomal subunit protein uS17

2

0

Small-scale

0.585

High

886407

RS4X
Small ribosomal subunit protein eS4, X isoform

2

0

Small-scale

0.585

High

886417

RS26
Small ribosomal subunit protein eS26

2

0

Small-scale

0.585

High

371469

MYC
Myc proto-oncogene protein

2

2

Small-scale

0.584

High

886390

RS3A
Small ribosomal subunit protein eS1

2

1

Small-scale

0.584

High

886453

HNRPU
Heterogeneous nuclear ribonucleoprotein U

2

2

Small-scale

0.584

High

886615

RL26L
Ribosomal protein uL24-like

3

5

High-throughput

0.578

High

238440

RAD21
Double-strand-break repair protein rad21 homolog

2

0

Small-scale

0.576

High

886511

ZMYM4
Zinc finger MYM-type protein 4

1

8

High-throughput

0.573

High

395694

ESR1
Estrogen receptor

2

16

High-throughput

0.571

High

563419

CFTR
Cystic fibrosis transmembrane conductance regulator

2

0

Small-scale

0.563

High

886430

YBOX1
Y-box-binding protein 1

1

11

Small-scale

0.561

High

886446

SMAD3
Mothers against decapentaplegic homolog 3

1

5

Small-scale

0.561

High

886465

RAD51
DNA repair protein RAD51 homolog 1

1

1

Small-scale

0.561

High

140813

NOP56
Nucleolar protein 56

1

2

High-throughput

0.536

High

166128

AIM2
Interferon-inducible protein AIM2

1

3

High-throughput

0.536

High

250507

HNRPQ
Heterogeneous nuclear ribonucleoprotein Q

1

2

High-throughput

0.536

High

286904

PRKRA
Interferon-inducible double-stranded RNA-dependent protein kinase activator A

1

20

High-throughput

0.536

High

288603

NPM3
Nucleoplasmin-3

1

10

High-throughput

0.536

High

290488

SURF6
Surfeit locus protein 6

1

4

High-throughput

0.536

High

338788

CBX6
Chromobox protein homolog 6

1

20

High-throughput

0.536

High

451492

CENPB
Major centromere autoantigen B

1

9

High-throughput

0.536

High

502270

H2A1
Histone H2A type 1

1

5

High-throughput

0.536

High

550177

PABP1
Polyadenylate-binding protein 1

1

2

High-throughput

0.536

High

565818

EF2
Elongation factor 2

1

1

High-throughput

0.536

High

595710

H13
Histone H1.3

1

14

High-throughput

0.536

High

599716

YBOX3
Y-box-binding protein 3

1

11

High-throughput

0.536

High

833083

MNDA
Myeloid cell nuclear differentiation antigen

1

3

High-throughput

0.536

High

849126

KSYK
Tyrosine-protein kinase SYK

1

5

High-throughput

0.536

High

853930

KI67
Proliferation marker protein Ki-67

1

3

High-throughput

0.536

High

858844

RL27A
Large ribosomal subunit protein uL15

1

3

High-throughput

0.536

High

860662

RS10
Small ribosomal subunit protein eS10

1

4

High-throughput

0.536

High

886374

FXR2
RNA-binding protein FXR2

1

7

High-throughput

0.536

High

886384

EIF3E
Eukaryotic translation initiation factor 3 subunit E

1

1

High-throughput

0.536

High

886394

RL37A
Large ribosomal subunit protein eL43

1

1

High-throughput

0.536

High

886396

RS7
Small ribosomal subunit protein eS7

1

1

High-throughput

0.536

High

886431

CSK2B
Casein kinase II subunit beta

1

1

High-throughput

0.536

High

886437

RED1
Double-stranded RNA-specific editase 1

1

9

High-throughput

0.536

High

886444

RT09
Small ribosomal subunit protein uS9m

1

6

High-throughput

0.536

High

886449

SRSF3
Serine/arginine-rich splicing factor 3

1

20

High-throughput

0.536

High

886452

PURA
Transcriptional activator protein Pur-alpha

1

11

High-throughput

0.536

High

886468

SRSF1
Serine/arginine-rich splicing factor 1

1

16

High-throughput

0.536

High

886469

SRSF4
Serine/arginine-rich splicing factor 4

1

16

High-throughput

0.536

High

886476

SRSF5
Serine/arginine-rich splicing factor 5

1

17

High-throughput

0.536

High

886477

SRSF6
Serine/arginine-rich splicing factor 6

1

20

High-throughput

0.536

High

886478

PABP4
Polyadenylate-binding protein 4

1

2

High-throughput

0.536

High

886480

KRR1
KRR1 small subunit processome component homolog

1

6

High-throughput

0.536

High

886483

EIF3A
Eukaryotic translation initiation factor 3 subunit A

1

5

High-throughput

0.536

High

886484

TRI25
E3 ubiquitin/ISG15 ligase TRIM25

1

10

High-throughput

0.536

High

886485

FGFP1
Fibroblast growth factor-binding protein 1

1

5

High-throughput

0.536

High

886497

SRSF7
Serine/arginine-rich splicing factor 7

1

10

High-throughput

0.536

High

886501

HNRL2
Heterogeneous nuclear ribonucleoprotein U-like protein 2

1

2

High-throughput

0.536

High

886502

RN151
RING finger protein 151

1

13

High-throughput

0.536

High

886505

ZN326
DBIRD complex subunit ZNF326

1

1

High-throughput

0.536

High

886506

NOM1
Nucleolar MIF4G domain-containing protein 1

1

2

High-throughput

0.536

High

886516

RS27L
Ribosomal protein eS27-like

1

1

High-throughput

0.536

High

886517

H1FNT
Testis-specific H1 histone

1

2

High-throughput

0.536

High

886519

DHX30
ATP-dependent RNA helicase DHX30

1

2

High-throughput

0.536

High

886527

ZCH18
Zinc finger CCCH domain-containing protein 18

1

4

High-throughput

0.536

High

886528

CAND1
Cullin-associated NEDD8-dissociated protein 1

1

1

High-throughput

0.536

High

886535

SERB1
SERPINE1 mRNA-binding protein 1

1

1

High-throughput

0.536

High

886540

THAP3
THAP domain-containing protein 3

1

2

High-throughput

0.536

High

886541

DNJC9
DnaJ homolog subfamily C member 9

1

9

High-throughput

0.536

High

886542

DGCR8
Microprocessor complex subunit DGCR8

1

4

High-throughput

0.536

High

886543

H1X
Histone H1.10

1

1

High-throughput

0.536

High

886555

NEIL1
Endonuclease 8-like 1

1

4

High-throughput

0.536

High

886557

DDX27
Probable ATP-dependent RNA helicase DDX27

1

5

High-throughput

0.536

High

886561

ZC3HA
Zinc finger CCCH domain-containing protein 10

1

1

High-throughput

0.536

High

886568

RBM4B
RNA-binding protein 4B

1

6

High-throughput

0.536

High

886572

LLPH
Protein LLP homolog

1

1

High-throughput

0.536

High

886573

UTP23
rRNA-processing protein UTP23 homolog

1

1

High-throughput

0.536

High

886575

PCGF1
Polycomb group RING finger protein 1

1

11

Small-scale

0.536

High

886576

GNL3
Guanine nucleotide-binding protein-like 3

1

1

High-throughput

0.536

High

886582

CHM4B
Charged multivesicular body protein 4b

1

1

High-throughput

0.536

High

886594

LYAR
Cell growth-regulating nucleolar protein

1

2

High-throughput

0.536

High

886598

NOP53
Ribosome biogenesis protein NOP53

1

3

High-throughput

0.536

High

886607

PURG
Purine-rich element-binding protein gamma

1

11

High-throughput

0.536

High

886608

GPTC8
G patch domain-containing protein 8

1

6

High-throughput

0.536

High

886610

ACINU
Apoptotic chromatin condensation inducer in the nucleus

1

7

High-throughput

0.536

High

886613

ABT1
Activator of basal transcription 1

1

1

High-throughput

0.536

High

886622

YBOX2
Y-box-binding protein 2

1

11

High-throughput

0.536

High

886624

RL36
Large ribosomal subunit protein eL36

1

8

High-throughput

0.536

High

886625

DCAF1
DDB1- and CUL4-associated factor 1

1

4

High-throughput

0.536

High

886626

RBM19
Probable RNA-binding protein 19

1

5

High-throughput

0.536

High

886488

RRP1B
Ribosomal RNA processing protein 1 homolog B

1

1

High-throughput

0.515

High

886507

DJC21
DnaJ homolog subfamily C member 21

1

6

High-throughput

0.515

High

421720

A4
Amyloid-beta precursor protein

1

12

High-throughput

0.515

High

134266

RPOM
DNA-directed RNA polymerase, mitochondrial

1

0

High-throughput

0.513

High

134607

SAP18
Histone deacetylase complex subunit SAP18

1

0

High-throughput

0.513

High

182940

NKRF
NF-kappa-B-repressing factor

1

0

High-throughput

0.513

High

329713

ZRAB2
Zinc finger Ran-binding domain-containing protein 2

1

0

High-throughput

0.513

High

346730

CAVN2
Caveolae-associated protein 2

1

0

High-throughput

0.513

High

475298

RS17
Small ribosomal subunit protein eS17

1

0

High-throughput

0.513

High

627615

IF2B
Eukaryotic translation initiation factor 2 subunit 2

1

0

High-throughput

0.513

High

673823

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.513

High

748963

RL9
Large ribosomal subunit protein uL6

1

0

High-throughput

0.513

High

770102

RL22
Large ribosomal subunit protein eL22

1

0

High-throughput

0.513

High

834397

SYIC
Isoleucine--tRNA ligase, cytoplasmic

1

0

High-throughput

0.513

High

886376

RT29
Small ribosomal subunit protein mS29

1

0

High-throughput

0.513

High

886388

SRP54
Signal recognition particle subunit SRP54

1

0

High-throughput

0.513

High

886402

RS18
Small ribosomal subunit protein uS13

1

0

High-throughput

0.513

High

886403

RS29
Small ribosomal subunit protein uS14

1

0

High-throughput

0.513

High

886414

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.513

High

886416

RS25
Small ribosomal subunit protein eS25

1

0

High-throughput

0.513

High

886418

RS28
Small ribosomal subunit protein eS28

1

0

High-throughput

0.513

High

886428

RS21
Small ribosomal subunit protein eS21

1

0

High-throughput

0.513

High

886442

RT15
Small ribosomal subunit protein uS15m

1

0

High-throughput

0.513

High

886447

ERH
Enhancer of rudimentary homolog

1

0

High-throughput

0.513

High

886466

RL18
Large ribosomal subunit protein eL18

1

0

High-throughput

0.513

High

886473

AIMP1
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1

1

0

High-throughput

0.513

High

886496

PTN14
Tyrosine-protein phosphatase non-receptor type 14

1

0

High-throughput

0.513

High

886508

HP1B3
Heterochromatin protein 1-binding protein 3

1

0

High-throughput

0.513

High

886524

LYRIC
Protein LYRIC

1

0

High-throughput

0.513

High

886531

ZC3H3
Zinc finger CCCH domain-containing protein 3

1

0

High-throughput

0.513

High

886580

GTPB4
GTP-binding protein 4

1

0

High-throughput

0.513

High

886602

EIF3K
Eukaryotic translation initiation factor 3 subunit K

1

0

High-throughput

0.513

High

886604

SRP68
Signal recognition particle subunit SRP68

1

0

High-throughput

0.513

High

886609

RALY
RNA-binding protein Raly

1

0

High-throughput

0.513

High

886616

SATB2
DNA-binding protein SATB2

1

0

High-throughput

0.513

High

886617

PA2G4
Proliferation-associated protein 2G4

1

0

High-throughput

0.513

High

886619

EIF3L
Eukaryotic translation initiation factor 3 subunit L

1

0

High-throughput

0.513

High

886627

LAS1L
Ribosomal biogenesis protein LAS1L

1

0

High-throughput

0.513

High

397673

NU4M
NADH-ubiquinone oxidoreductase chain 4

1

1

Small-scale

0.508

High

886529

CHD1L
Chromodomain-helicase-DNA-binding protein 1-like

1

6

Small-scale

0.508

High

625782

RXRA
Retinoic acid receptor RXR-alpha

1

11

Small-scale

0.501

High

886603

KDM5B
Lysine-specific demethylase 5B

1

0

Small-scale

0.493

High

295117

EIF3G
Eukaryotic translation initiation factor 3 subunit G

1

3

High-throughput

0.489

High

345525

STAU1
Double-stranded RNA-binding protein Staufen homolog 1

1

20

High-throughput

0.489

High

716787

RL12
Large ribosomal subunit protein uL11

1

1

High-throughput

0.489

High

859535

RL21
Large ribosomal subunit protein eL21

1

1

High-throughput

0.489

High

886382

EIF3B
Eukaryotic translation initiation factor 3 subunit B

1

1

High-throughput

0.489

High

886439

RT10
Small ribosomal subunit protein uS10m

1

1

High-throughput

0.489

High

886441

RT05
Small ribosomal subunit protein uS5m

1

1

High-throughput

0.489

High

886462

EF1A2
Elongation factor 1-alpha 2

1

1

High-throughput

0.489

High

886479

EIF3I
Eukaryotic translation initiation factor 3 subunit I

1

4

High-throughput

0.489

High

886514

LARP1
La-related protein 1

1

2

High-throughput

0.489

High

886525

KTN1
Kinectin

1

4

High-throughput

0.489

High

886562

FRMD6
FERM domain-containing protein 6

1

3

High-throughput

0.489

High

886621

RT07
Small ribosomal subunit protein uS7m

1

1

High-throughput

0.489

High

886565

SIN3A
Paired amphipathic helix protein Sin3a

1

0

Small-scale

0.480

High

128856

MEN1
Menin

1

2

High-throughput

0.479

High

141371

DDX3X
ATP-dependent RNA helicase DDX3X

1

2

Small-scale

0.479

High

142504

IMA3
Importin subunit alpha-3

1

7

Small-scale

0.479

High

154650

ARI1A
AT-rich interactive domain-containing protein 1A

1

3

Small-scale

0.479

High

175859

SET1A
Histone-lysine N-methyltransferase SETD1A

1

1

High-throughput

0.479

High

194054

R113A
E3 ubiquitin-protein ligase RNF113A

1

1

High-throughput

0.479

High

241083

PRKN
E3 ubiquitin-protein ligase parkin

1

11

High-throughput

0.479

High

259622

BRD4
Bromodomain-containing protein 4

1

4

High-throughput

0.479

High

277602

H2AY
Core histone macro-H2A.1

1

8

High-throughput

0.479

High

285141

EED
Polycomb protein EED

1

4

High-throughput

0.479

High

342127

BRD1
Bromodomain-containing protein 1

1

2

High-throughput

0.479

High

378423

IFNG
Interferon gamma

1

1

Small-scale

0.479

High

385555

LMNA
Prelamin-A/C [Cleaved into: Lamin-A/C

1

8

Small-scale

0.479

High

405904

MYCN
N-myc proto-oncogene protein

1

2

High-throughput

0.479

High

436824

K1C18
Keratin, type I cytoskeletal 18

1

3

Small-scale

0.479

High

443717

ATPB
ATP synthase F(1) complex subunit beta, mitochondrial

1

1

Small-scale

0.479

High

468178

HS90B
Heat shock protein HSP 90-beta

1

4

Small-scale

0.479

High

501932

H2AZ
Histone H2A.Z

1

6

Small-scale

0.479

High

504865

H2AB2
Histone H2A-Bbd type 2/3

1

7

High-throughput

0.479

High

519348

MYB
Transcriptional activator Myb

1

1

High-throughput

0.479

High

534788

BIP
Endoplasmic reticulum chaperone BiP

1

7

Small-scale

0.479

High

536748

HSP7C
Heat shock cognate 71 kDa protein

1

4

Small-scale

0.479

High

605181

TAL1
T-cell acute lymphocytic leukemia protein 1

1

5

High-throughput

0.479

High

606423

CEBPB
CCAAT/enhancer-binding protein beta

1

7

High-throughput

0.479

High

608498

DDX5
Probable ATP-dependent RNA helicase DDX5

1

2

Small-scale

0.479

High

659183

SP100
Nuclear autoantigen Sp-100

1

8

High-throughput

0.479

High

674108

BRD2
Bromodomain-containing protein 2

1

7

High-throughput

0.479

High

685127

PAX6
Paired box protein Pax-6

1

2

High-throughput

0.479

High

729177

HNRH1
Heterogeneous nuclear ribonucleoprotein H

1

8

Small-scale

0.479

High

765251

BMI1
Polycomb complex protein BMI-1

1

8

High-throughput

0.479

High

772674

MYH9
Myosin-9

1

2

Small-scale

0.479

High

773128

MYH10
Myosin-10

1

2

Small-scale

0.479

High

852699

VDAC2
Non-selective voltage-gated ion channel VDAC2

1

1

Small-scale

0.479

High

872069

SOX2
Transcription factor SOX-2

1

10

High-throughput

0.479

High

877503

LHX1
LIM/homeobox protein Lhx1

1

3

High-throughput

0.479

High

886372

LHX2
LIM/homeobox protein Lhx2

1

4

High-throughput

0.479

High

886377

SMCA4
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 4

1

5

Small-scale

0.479

High

886379

IMA1
Importin subunit alpha-1

1

7

Small-scale

0.479

High

886380

HIRA
Protein HIRA

1

3

Small-scale

0.479

High

886386

IF4A1
Eukaryotic initiation factor 4A-I

1

3

Small-scale

0.479

High

886392

RL15
Large ribosomal subunit protein eL15

1

2

Small-scale

0.479

High

886410

H4
Histone H4

1

2

High-throughput

0.479

High

886411

H2B1C
Histone H2B type 1-C/E/F/G/I

1

2

High-throughput

0.479

High

886432

H31
Histone H3.1

1

10

High-throughput

0.479

High

886433

RNF4
E3 ubiquitin-protein ligase RNF4

1

15

High-throughput

0.479

High

886434

GTF2I
General transcription factor II-I

1

1

Small-scale

0.479

High

886436

PRKDC
DNA-dependent protein kinase catalytic subunit

1

1

Small-scale

0.479

High

886454

SET
Protein SET

1

5

Small-scale

0.479

High

886456

PO5F1
POU domain, class 5, transcription factor 1

1

5

Small-scale

0.479

High

886459

HEN1
Helix-loop-helix protein 1

1

5

High-throughput

0.479

High

886460

RL6
Large ribosomal subunit protein eL6

1

1

High-throughput

0.479

High

886461

TOP2B
DNA topoisomerase 2-beta

1

1

Small-scale

0.479

High

886463

HME1
Homeobox protein engrailed-1

1

2

High-throughput

0.479

High

886464

RING1
E3 ubiquitin-protein ligase RING1

1

9

Small-scale

0.479

High

886471

EP300
Histone acetyltransferase p300

1

9

Small-scale

0.479

High

886472

CDC20
Cell division cycle protein 20 homolog

1

3

Small-scale

0.479

High

886481

CUL3
Cullin-3

1

20

High-throughput

0.479

High

886486

MDC1
Mediator of DNA damage checkpoint protein 1

1

5

Small-scale

0.479

High

886489

LBR
Delta(14)-sterol reductase LBR

1

1

Small-scale

0.479

High

886491

BRD3
Bromodomain-containing protein 3

1

4

High-throughput

0.479

High

886492

NONO
Non-POU domain-containing octamer-binding protein

1

7

Small-scale

0.479

High

886499

IF16
Gamma-interferon-inducible protein 16

1

3

High-throughput

0.479

High

886510

TAF3
Transcription initiation factor TFIID subunit 3

1

6

Small-scale

0.479

High

886512

Q6ICH2
single-stranded DNA cytosine deaminase

1

6

High-throughput

0.479

High

886515

TRI67
Tripartite motif-containing protein 67

1

20

High-throughput

0.479

High

886522

KAISO
Transcriptional regulator Kaiso

1

15

Small-scale

0.479

High

886532

SMC5
Structural maintenance of chromosomes protein 5

1

2

High-throughput

0.479

High

886534

CGAS
Cyclic GMP-AMP synthase

1

1

High-throughput

0.479

High

886536

NUP43
Nucleoporin Nup43

1

4

High-throughput

0.479

High

886539

DOT1L
Histone-lysine N-methyltransferase, H3 lysine-79 specific

1

2

High-throughput

0.479

High

886545

ESR2
Estrogen receptor beta

1

16

High-throughput

0.479

High

886546

KAT6A
Histone acetyltransferase KAT6A

1

6

High-throughput

0.479

High

886548

FBXW7
F-box/WD repeat-containing protein 7

1

1

High-throughput

0.479

High

886549

RL36L
Ribosomal protein eL42-like

1

1

High-throughput

0.479

High

886550

ZUP1
Zinc finger-containing ubiquitin peptidase 1

1

3

High-throughput

0.479

High

886553

SNR40
U5 small nuclear ribonucleoprotein 40 kDa protein

1

4

High-throughput

0.479

High

886559

DDRGK
DDRGK domain-containing protein 1

1

1

High-throughput

0.479

High

886563

CIC
Protein capicua homolog

1

11

High-throughput

0.479

High

886589

SIR7
NAD-dependent protein deacetylase sirtuin-7

1

3

High-throughput

0.479

High

886591

RASF1
Ras association domain-containing protein 1

1

1

Small-scale

0.479

High

886599

UBP36
Ubiquitin carboxyl-terminal hydrolase 36

1

1

High-throughput

0.479

High

886611

AGO2
Protein argonaute-2

1

1

Small-scale

0.479

High

886614

MAGD2
Melanoma-associated antigen D2

1

4

Small-scale

0.479

High

886618

SMC3
Structural maintenance of chromosomes protein 3

1

1

Small-scale

0.479

High

539782

RALA
Ras-related protein Ral-A

1

3

Small-scale

0.464

High

222826

PRC1
Protein regulator of cytokinesis 1

1

0

High-throughput

0.458

High

294622

ZMY10
Zinc finger MYND domain-containing protein 10

1

0

Small-scale

0.458

High

403145

APOB
Apolipoprotein B-100

1

0

Small-scale

0.458

High

424823

ADT2
ADP/ATP translocase 2

1

0

Small-scale

0.458

High

573031

KPYM
Pyruvate kinase PKM

1

0

Small-scale

0.458

High

612165

ARF4
ADP-ribosylation factor 4

1

0

Small-scale

0.458

High

662540

GATA3
Trans-acting T-cell-specific transcription factor GATA-3

1

0

High-throughput

0.458

High

703109

TEAD1
Transcriptional enhancer factor TEF-1

1

0

High-throughput

0.458

High

760876

GLYM
Serine hydroxymethyltransferase, mitochondrial

1

0

Small-scale

0.458

High

862748

IQGA1
Ras GTPase-activating-like protein IQGAP1

1

0

Small-scale

0.458

High

886412

RAN
GTP-binding nuclear protein Ran

1

0

Small-scale

0.458

High

886413

RL23
Large ribosomal subunit protein uL14

1

0

Small-scale

0.458

High

886426

PPIA
Peptidyl-prolyl cis-trans isomerase A

1

0

High-throughput

0.458

High

886455

TFAP4
Transcription factor AP-4

1

0

Small-scale

0.458

High

886467

KHDR1
KH domain-containing, RNA-binding, signal transduction-associated protein 1

1

0

Small-scale

0.458

High

886493

PCBP1
Poly(rC)-binding protein 1

1

0

High-throughput

0.458

High

886498

DREB
Drebrin

1

0

Small-scale

0.458

High

886526

NAA40
N-alpha-acetyltransferase 40

1

0

High-throughput

0.458

High

886566

FEV
Protein FEV

1

0

High-throughput

0.458

High

886567

PHB2
Prohibitin-2

1

0

Small-scale

0.458

High

886571

MESP1
Mesoderm posterior protein 1

1

0

Small-scale

0.458

High

886592

RAD18
E3 ubiquitin-protein ligase RAD18

1

0

High-throughput

0.458

High

886593

AKIP
Small ribosomal subunit protein mS38

1

0

High-throughput

0.458

High

886595

TE2IP
Telomeric repeat-binding factor 2-interacting protein 1

1

0

High-throughput

0.458

High

886597

TECR
Very-long-chain enoyl-CoA reductase

1

0

Small-scale

0.458

High

886518

RHOU
Rho-related GTP-binding protein RhoU

1

5

High-throughput

0.457

High

47496

RPSA2
Small ribosomal subunit protein uS2B

1

3

High-throughput

0.445

High

73378

B2CML4
single-stranded DNA cytosine deaminase

1

6

High-throughput

0.445

High

94415

D6RAT0
Small ribosomal subunit protein eS1

1

1

High-throughput

0.445

High

886570

HSPB9
Heat shock protein beta-9

1

0

Small-scale

0.438

High

532450

CH60
60 kDa heat shock protein, mitochondrial

1

1

Small-scale

0.437

High

605128

KCRS
Creatine kinase S-type, mitochondrial

1

1

High-throughput

0.437

High

611799

RL35A
Large ribosomal subunit protein eL33

1

1

Small-scale

0.437

High

680275

ATPA
ATP synthase F(1) complex subunit alpha, mitochondrial

1

1

Small-scale

0.437

High

882592

EFTU
Elongation factor Tu, mitochondrial

1

2

Small-scale

0.437

High

886450

S25A3
Solute carrier family 25 member 3

1

1

Small-scale

0.437

High

886504

DHB12
Very-long-chain 3-oxoacyl-CoA reductase

1

1

Small-scale

0.437

High

886583

PKHA4
Pleckstrin homology domain-containing family A member 4

1

20

High-throughput

0.437

High

886601

DHCR7
7-dehydrocholesterol reductase

1

1

Small-scale

0.437

High

886530

BAP18
BPTF-associated chromatin complex component 1

1

0

High-throughput

0.426

High

886600

CHD7
Chromodomain-helicase-DNA-binding protein 7

1

5

Small-scale

0.408

High

107262

F8VR69
Ribosomal protein L6

1

1

High-throughput

0.407

High

116383

H3BUK8
Large ribosomal subunit protein eL13

1

5

High-throughput

0.407

High

553793

KCRU
Creatine kinase U-type, mitochondrial

1

1

High-throughput

0.407

High

844737

EAA1
Excitatory amino acid transporter 1

1

1

High-throughput

0.407

High

886523

SL9B2
Sodium/hydrogen exchanger 9B2

1

4

High-throughput

0.407

High

886578

S4A5
Electrogenic sodium bicarbonate cotransporter 4

1

1

High-throughput

0.407

High

886438

RT22
Small ribosomal subunit protein mS22

2

0

High-throughput

0.328

High

886443

RT34
Small ribosomal subunit protein mS34

2

0

High-throughput

0.328

High

886423

RL32
Large ribosomal subunit protein eL32

2

0

Small-scale

0.318

High

81685

EIFCL
Eukaryotic translation initiation factor 3 subunit C-like protein

1

0

High-throughput

0.279

Low

303458

SRP72
Signal recognition particle subunit SRP72

1

0

High-throughput

0.279

Low

428088

RLA1
Large ribosomal subunit protein P1

1

0

High-throughput

0.279

Low

428326

RLA2
Large ribosomal subunit protein P2

1

0

High-throughput

0.279

Low

539977

BCR
Breakpoint cluster region protein

1

0

High-throughput

0.279

Low

762223

TRY3
Trypsin-3

1

0

High-throughput

0.279

Low

847468

SSRA
Translocon-associated protein subunit alpha

1

0

High-throughput

0.279

Low

886389

ABCE1
ATP-binding cassette sub-family E member 1

1

0

High-throughput

0.279

Low

886420

RL39
Large ribosomal subunit protein eL39

1

0

High-throughput

0.279

Low

886427

RL38
Large ribosomal subunit protein eL38

1

0

High-throughput

0.279

Low

886440

RT35
Small ribosomal subunit protein mS35

1

0

High-throughput

0.279

Low

886445

RL24
Large ribosomal subunit protein eL24

1

0

High-throughput

0.279

Low

886520

EIF3M
Eukaryotic translation initiation factor 3 subunit M

1

0

High-throughput

0.279

Low

886552

CMBL
Carboxymethylenebutenolidase homolog

1

0

High-throughput

0.279

Low

886587

RT30
Large ribosomal subunit protein mL65

1

0

High-throughput

0.279

Low

886605

IL17B
Interleukin-17B

1

0

High-throughput

0.279

Low

886620

RT28
Small ribosomal subunit protein bS1m

1

0

High-throughput

0.279

Low

886623

RM11
Large ribosomal subunit protein uL11m

1

0

High-throughput

0.279

Low

886596

CELR3
Cadherin EGF LAG seven-pass G-type receptor 3

1

0

Small-scale

0.261

Low

184412

SURF4
Surfeit locus protein 4

1

0

Small-scale

0.249

Low

350222

FADS2
Acyl-CoA 6-desaturase

1

0

Small-scale

0.249

Low

417319

RPN1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1

1

0

Small-scale

0.249

Low

418012

RPN2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

1

0

Small-scale

0.249

Low

598033

AT2A2
Sarcoplasmic/endoplasmic reticulum calcium ATPase 2

1

0

Small-scale

0.249

Low

784548

ATPG
ATP synthase F(1) complex subunit gamma, mitochondrial

1

0

Small-scale

0.249

Low

886371

SERPH
Serpin H1

1

0

Small-scale

0.249

Low

886375

RAB5C
Ras-related protein Rab-5C

1

0

Small-scale

0.249

Low

886381

P5CS
Delta-1-pyrroline-5-carboxylate synthase

1

0

Small-scale

0.249

Low

886383

TMM33
Transmembrane protein 33

1

0

Small-scale

0.249

Low

886385

MYL6
Myosin light polypeptide 6

1

0

Small-scale

0.249

Low

886395

S61A1
Protein transport protein Sec61 subunit alpha isoform 1

1

0

Small-scale

0.249

Low

886495

MARE2
Microtubule-associated protein RP/EB family member 2

1

0

Small-scale

0.249

Low

886551

FAF2
FAS-associated factor 2

1

0

Small-scale

0.249

Low

886584

SFXN1
Sideroflexin-1

1

0

Small-scale

0.249

Low

886581

MAGT1
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit MAGT1

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025