Protein: SSP1B
FACT complex subunit ssrp1-B (Facilitates chromatin transcription complex subunit ssrp1-B) (HMG box-containing protein 3) (Structure-specific recognition protein 1-B)

Gene: SSP1B, hmg-3
Organism: Caenorhabditis elegans
Interactions: 141
UniProt ID: O01683

Gene Ontology (top 5):
GO:0003677 - DNA binding
GO:0005634 - nucleus
GO:0006260 - DNA replication
GO:0006281 - DNA repair
GO:0006334 - nucleosome assembly

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

136713

Q27485
Histone H2A

2

20

Small-scale

0.754

High

136734

SPT16
FACT complex subunit spt-16

2

14

Small-scale

0.754

High

136643

H2B1
Histone H2B 1

1

20

Small-scale

0.618

High

136663

H4
Histone H4

1

12

Small-scale

0.618

High

136714

H2B4
Probable histone H2B 4

1

20

Small-scale

0.618

High

136641

RENT1
Regulator of nonsense transcripts 1

2

5

Small-scale

0.584

High

136669

CTR9
RNA polymerase-associated protein CTR9

2

10

Small-scale

0.584

High

136676

GLD1
Female germline-specific tumor suppressor gld-1

2

4

Small-scale

0.584

High

136703

WAGO1
Argonaute protein wago-1

2

5

Small-scale

0.584

High

136715

Q27GU1
Piwi domain-containing protein

2

5

Small-scale

0.584

High

136732

Q9N478
ATP-dependent RNA helicase

2

13

Small-scale

0.584

High

136737

TNKS1
Poly [ADP-ribose] polymerase tankyrase

2

14

Small-scale

0.584

High

136749

Q9XX35
F-box domain-containing protein

2

2

Small-scale

0.584

High

136696

PUF5
Pumilio domain-containing protein 5

2

0

Small-scale

0.559

High

136470

O01524
SNU

2

2

Small-scale

0.533

High

136653

IF5A1
Eukaryotic translation initiation factor 5A-1

2

2

Small-scale

0.533

High

136656

TCPZ
T-complex protein 1 subunit zeta

2

6

Small-scale

0.533

High

136662

VIT1
Vitellogenin-1

2

1

Small-scale

0.533

High

136670

Q09409
RNA uridylyltransferase

2

4

Small-scale

0.533

High

136685

EIF2A
Eukaryotic translation initiation factor 2A

2

11

Small-scale

0.533

High

136702

SPT5H
Transcription elongation factor SPT5

2

20

Small-scale

0.533

High

136718

Q8MXJ1
Aggrecan core protein

2

13

Small-scale

0.533

High

136731

Q9N3Q9
Nucleolar protein 14

2

1

Small-scale

0.533

High

136733

Q9N4I3
CUE domain-containing protein

2

3

Small-scale

0.533

High

136638

O62332
Importin N-terminal domain-containing protein

1

8

High-throughput

0.481

High

104553

RTF1
RNA polymerase-associated protein RTF1 homolog

1

1

High-throughput

0.479

High

107971

CATIN
Splicing factor Cactin

1

2

Small-scale

0.479

High

110117

H2L048
AMPK1_CBM domain-containing protein

1

8

Small-scale

0.479

High

136626

LTV1
Protein LTV1 homolog

1

1

High-throughput

0.479

High

136628

O16297
DNA replication licensing factor MCM7

1

11

High-throughput

0.479

High

136631

NOG1
Nucleolar GTP-binding protein 1

1

3

High-throughput

0.479

High

136632

O44565
Laminin subunit beta-1

1

5

Small-scale

0.479

High

136634

O45502
DNaJ domain

1

8

High-throughput

0.479

High

136637

PHM2
Pharyngeal muscle protein 2

1

20

High-throughput

0.479

High

136640

EGL4
cGMP-dependent protein kinase egl-4

1

12

High-throughput

0.479

High

136646

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

9

High-throughput

0.479

High

136650

PLK1
Serine/threonine-protein kinase plk-1

1

2

High-throughput

0.479

High

136654

SPT6H
Suppressor of Ty 6 homolog

1

6

High-throughput

0.479

High

136655

KC1A
Casein kinase I isoform alpha

1

9

Small-scale

0.479

High

136664

PAF1
RNA polymerase II-associated factor 1 homolog

1

5

High-throughput

0.479

High

136671

YP93
Uncharacterized helicase C28H8.3

1

14

Small-scale

0.479

High

136682

PRS7
26S proteasome regulatory subunit 7

1

3

Small-scale

0.479

High

136700

GNL3
Guanine nucleotide-binding protein-like 3 homolog

1

5

Small-scale

0.479

High

136711

BCCIP
Protein BCCIP homolog

1

1

High-throughput

0.479

High

136712

TOP2
DNA topoisomerase 2 top-2

1

7

Small-scale

0.479

High

136716

Q7Z145
K Homology domain-containing protein

1

10

High-throughput

0.479

High

136722

TCP4
Putative RNA polymerase II transcriptional coactivator

1

1

Small-scale

0.479

High

136723

PSA5
Proteasome subunit alpha type-5

1

5

High-throughput

0.479

High

136725

Q95QN2
RNA helicase

1

12

High-throughput

0.479

High

136735

Q9N5V3
Importin N-terminal domain-containing protein

1

9

Small-scale

0.479

High

136743

SET26
Histone-lysine N-methyltransferase set-26

1

17

High-throughput

0.479

High

136744

Q9U2M6
Homeobox domain-containing protein

1

11

High-throughput

0.479

High

136745

ATRX
Transcriptional regulator ATRX homolog

1

20

High-throughput

0.479

High

136746

Q9XVF1
Piwi domain-containing protein

1

5

High-throughput

0.479

High

136572

NO66
Bifunctional lysine-specific demethylase and histidyl-hydroxylase NO66

1

0

High-throughput

0.458

High

136636

O61741
cysteine desulfurase

1

0

High-throughput

0.458

High

136642

PID3
Protein pid-3

1

0

High-throughput

0.458

High

136665

P90790
Fanconi anemia group I protein

1

0

High-throughput

0.458

High

136677

Q17558
Transcription initiation factor IIF subunit alpha

1

0

High-throughput

0.458

High

136678

Q17974
Leucine-rich PPR motif-containing protein, mitochondrial

1

0

High-throughput

0.458

High

136686

YU0O
Uncharacterized protein F23B12.7

1

0

Small-scale

0.458

High

136639

O62333
Importin N-terminal domain-containing protein

1

8

High-throughput

0.457

High

60977

A5PEX6
MATH domain-containing protein

1

10

High-throughput

0.437

High

69044

A8WIR1
Ribosomal Protein, Small subunit

1

4

Small-scale

0.437

High

78132

B5BM23
MIF4G domain-containing protein

1

1

High-throughput

0.437

High

106045

G5EDE8
ERGIC-53-like protein

1

1

Small-scale

0.437

High

106054

G5EDF5
Elongation factor Tu, mitochondrial

1

8

High-throughput

0.437

High

106746

G5EE97
RRM domain-containing protein

1

4

High-throughput

0.437

High

136564

O01598
RNA helicase

1

3

High-throughput

0.437

High

136624

NAT10
RNA cytidine acetyltransferase

1

2

High-throughput

0.437

High

136627

EIF3C
Eukaryotic translation initiation factor 3 subunit C

1

3

Small-scale

0.437

High

136629

O16303
DNaJ domain

1

10

Small-scale

0.437

High

136630

O17157
RNA helicase

1

14

High-throughput

0.437

High

136633

O45181
RRM domain-containing protein

1

13

High-throughput

0.437

High

136635

CPL1
Cathepsin L-like

1

2

High-throughput

0.437

High

136644

VIT5
Vitellogenin-5

1

1

Small-scale

0.437

High

136645

HSP6
Heat shock protein hsp-6

1

9

High-throughput

0.437

High

136647

G3P3
Glyceraldehyde-3-phosphate dehydrogenase 3

1

1

Small-scale

0.437

High

136648

MLR1
Myosin regulatory light chain 1

1

2

Small-scale

0.437

High

136649

RHA2
Putative ATP-dependent RNA helicase rha-2

1

7

High-throughput

0.437

High

136651

RL21
Large ribosomal subunit protein eL21

1

2

Small-scale

0.437

High

136652

EIF3A
Eukaryotic translation initiation factor 3 subunit A

1

13

Small-scale

0.437

High

136657

RS3A
Small ribosomal subunit protein eS1

1

6

Small-scale

0.437

High

136658

RL23
Large ribosomal subunit protein uL14

1

2

Small-scale

0.437

High

136659

RS5
Small ribosomal subunit protein uS7

1

4

High-throughput

0.437

High

136660

RM03
Large ribosomal subunit protein uL3m

1

3

High-throughput

0.437

High

136661

CH60
Chaperonin homolog Hsp-60, mitochondrial

1

7

Small-scale

0.437

High

136666

SRP72
Signal recognition particle subunit SRP72

1

2

High-throughput

0.437

High

136667

SPD5
Spindle-defective protein 5

1

5

High-throughput

0.437

High

136668

RL27
Large ribosomal subunit protein eL27

1

4

High-throughput

0.437

High

136672

SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

1

3

Small-scale

0.437

High

136674

YSE2
Uncharacterized protein C53C9.2

1

2

Small-scale

0.437

High

136675

ANI2
Anillin-like protein 2

1

3

High-throughput

0.437

High

136679

Q18038
S1 motif domain-containing protein

1

6

Small-scale

0.437

High

136683

LAM2
Laminin-like protein lam-2

1

4

Small-scale

0.437

High

136684

Q18994
Translation initiation factor eIF2B subunit epsilon

1

2

High-throughput

0.437

High

136687

SYRC
Probable arginine--tRNA ligase, cytoplasmic

1

1

Small-scale

0.437

High

136688

PCCA
Propionyl-CoA carboxylase alpha chain, mitochondrial

1

3

Small-scale

0.437

High

136690

Q1XFY9
Small ribosomal subunit protein eS24

1

2

High-throughput

0.437

High

136692

Q20206
Small ribosomal subunit protein uS17

1

4

High-throughput

0.437

High

136693

RS9
Small ribosomal subunit protein uS4

1

3

Small-scale

0.437

High

136694

Q20720
Ribosomal L1 domain-containing protein

1

7

High-throughput

0.437

High

136695

IF5A2
Eukaryotic translation initiation factor 5A-2

1

2

Small-scale

0.437

High

136697

Q20760
Protein KRI1 homolog

1

1

High-throughput

0.437

High

136699

SYMC
Methionine--tRNA ligase, cytoplasmic

1

2

High-throughput

0.437

High

136701

IF2B
Eukaryotic translation initiation factor 2 subunit 2

1

1

High-throughput

0.437

High

136704

ANKHM
Ankyrin repeat and KH domain-containing protein mask-1

1

5

High-throughput

0.437

High

136705

Q21994
Ribose-phosphate pyrophosphokinase 2

1

1

High-throughput

0.437

High

136706

PSF1
Probable DNA replication complex GINS protein PSF1

1

1

Small-scale

0.437

High

136708

Q22135
RRM domain-containing protein

1

8

High-throughput

0.437

High

136709

Q22370
Peptidase M16 N-terminal domain-containing protein

1

3

High-throughput

0.437

High

136710

IF5
Eukaryotic translation initiation factor 5

1

1

High-throughput

0.437

High

136719

Q8WQA8
Small ribosomal subunit protein uS10

1

4

High-throughput

0.437

High

136726

Q9BKU5
Large ribosomal subunit protein uL15

1

3

High-throughput

0.437

High

136727

Q9BL83
Vesicle-fusing ATPase

1

2

High-throughput

0.437

High

136728

Q9GYQ9
CCR4-NOT transcription complex subunit 4

1

1

High-throughput

0.437

High

136736

KS6B
Ribosomal protein S6 kinase beta

1

7

High-throughput

0.437

High

136738

Q9TYL9
Coatomer subunit beta

1

1

Small-scale

0.437

High

136740

NSUN1
26S rRNA

1

3

High-throughput

0.437

High

136741

Q9U238
Translocon-associated protein subunit delta

1

1

Small-scale

0.437

High

136742

Q9U255
MI domain-containing protein

1

5

High-throughput

0.437

High

136747

RS15
Small ribosomal subunit protein uS19

1

5

High-throughput

0.437

High

136748

Q9XWI1
Activating signal cointegrator 1 complex subunit 3

1

17

High-throughput

0.437

High

110194

H2L0A8
RRM domain-containing protein

2

0

Small-scale

0.305

High

136720

Q93168
Activator of Hsp90 ATPase AHSA1-like N-terminal domain-containing protein

2

0

Small-scale

0.305

High

136729

Q9GYR5
NADAR domain-containing protein

2

0

Small-scale

0.305

High

109915

H2KZP3
Uncharacterized protein

1

0

High-throughput

0.249

Low

136625

TIM44
Probable mitochondrial import inner membrane translocase subunit tin-44

1

0

High-throughput

0.249

Low

136673

METH
Probable methionine synthase

1

0

High-throughput

0.249

Low

136680

Q18599
Acetyl-CoA hydrolase

1

0

Small-scale

0.249

Low

136681

Q18650
Uncharacterized protein

1

0

High-throughput

0.249

Low

136689

Q19974
NUC153 domain-containing protein

1

0

High-throughput

0.249

Low

136691

Q20034
CYTH domain-containing protein

1

0

High-throughput

0.249

Low

136698

Q20969
NUC153 domain-containing protein

1

0

High-throughput

0.249

Low

136707

MMAA1
Methylmalonic aciduria type A homolog, mitochondrial

1

0

Small-scale

0.249

Low

136717

GLS1
Germline survival defective-1

1

0

High-throughput

0.249

Low

136721

YXEK
Uncharacterized oxidoreductase F53C11.3

1

0

High-throughput

0.249

Low

136724

Q95PZ7
Proteasome activator complex subunit 3

1

0

Small-scale

0.249

Low

136730

Q9N3E8
PH domain-containing protein

1

0

High-throughput

0.249

Low

136739

Q9TYP8
SPK domain-containing protein

1

0

High-throughput

0.249

Low

136750

VATC
V-type proton ATPase subunit C

1

0

Small-scale

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024