Protein: RL40A
Ubiquitin-ribosomal protein eL40A fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40A (60S ribosomal protein L40-A) (CEP52)]

Gene: RL40A, RPL40A
Organism: Saccharomyces cerevisiae S288C
Interactions: 104
UniProt ID: P0CH08

Gene Ontology (top 5):
GO:0000027 - ribosomal large subunit assembly
GO:0000055 - ribosomal large subunit export from nucleus
GO:0002181 - cytoplasmic translation
GO:0003735 - structural constituent of ribosome
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

509873

UBP1
Ubiquitin carboxyl-terminal hydrolase 1

2

2

Small-scale

0.778

High

509890

AKL1
Serine/threonine-protein kinase AKL1

2

8

High-throughput

0.768

High

441004

KAPA
cAMP-dependent protein kinase type 1

1

6

High-throughput

0.647

High

509868

PHO85
Cyclin-dependent protein kinase PHO85

1

6

High-throughput

0.647

High

509871

KC11
Casein kinase I homolog 1

1

9

High-throughput

0.647

High

509880

KCC1
Calcium/calmodulin-dependent protein kinase I

1

5

High-throughput

0.647

High

509885

SWE1
Mitosis inhibitor protein kinase SWE1

1

11

High-throughput

0.647

High

509887

UBL1
Ubiquitin carboxyl-terminal hydrolase YUH1

1

9

Small-scale

0.647

High

509913

ATG1
Serine/threonine-protein kinase ATG1

1

4

High-throughput

0.647

High

509919

UBP2
Ubiquitin carboxyl-terminal hydrolase 2

1

16

Small-scale

0.647

High

509920

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

20

Small-scale

0.647

High

419555

H2A2
Histone H2A.2

1

17

High-throughput

0.618

High

432773

RL9A
Large ribosomal subunit protein uL6A

1

5

High-throughput

0.618

High

436272

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

15

High-throughput

0.618

High

509865

UBC3
Ubiquitin-conjugating enzyme E2-34 kDa

1

20

High-throughput

0.618

High

509870

RAD53
Serine/threonine-protein kinase RAD53

1

6

High-throughput

0.618

High

509876

CDC48
Cell division control protein 48

1

13

High-throughput

0.618

High

509884

RAD23
UV excision repair protein RAD23

1

20

High-throughput

0.618

High

509886

UFD4
Ubiquitin fusion degradation protein 4

1

20

High-throughput

0.618

High

509891

UBP14
Ubiquitin carboxyl-terminal hydrolase 14

1

15

High-throughput

0.618

High

509898

RV167
Reduced viability upon starvation protein 167

1

5

High-throughput

0.618

High

509905

OTU1
Ubiquitin thioesterase OTU1

1

3

High-throughput

0.618

High

509912

RL9B
Large ribosomal subunit protein uL6B

1

5

High-throughput

0.618

High

509922

TOM1
E3 ubiquitin-protein ligase TOM1

1

20

High-throughput

0.618

High

509932

CUE5
Ubiquitin-binding protein CUE5

1

1

High-throughput

0.618

High

392071

HSP82
ATP-dependent molecular chaperone HSP82

2

11

High-throughput

0.584

High

509861

RL35A
Large ribosomal subunit protein uL29A

2

4

Small-scale

0.584

High

509915

LSG1
Large subunit GTPase 1

2

1

High-throughput

0.571

High

509908

BBC1
Myosin tail region-interacting protein MTI1

1

6

High-throughput

0.553

High

509888

MID2
Cell wall integrity sensor MID2

1

2

Small-scale

0.504

High

509936

SMT3
Ubiquitin-like protein SMT3

1

3

High-throughput

0.481

High

376257

YPT1
GTP-binding protein YPT1

1

5

High-throughput

0.479

High

409662

RL24A
Large ribosomal subunit protein eL24A

1

5

High-throughput

0.479

High

416348

HXKA
Hexokinase-1

1

4

High-throughput

0.479

High

427086

RLA0
Large ribosomal subunit protein uL10

1

2

Small-scale

0.479

High

432449

RL7A
Large ribosomal subunit protein uL30A

1

7

High-throughput

0.479

High

433116

RL17A
Large ribosomal subunit protein uL22A

1

3

High-throughput

0.479

High

434214

RL29
Large ribosomal subunit protein eL29

1

2

High-throughput

0.479

High

438237

NOT3
General negative regulator of transcription subunit 3

1

2

High-throughput

0.479

High

509853

HSP77
Import motor subunit, mitochondrial

1

10

High-throughput

0.479

High

509854

RL43B
Large ribosomal subunit protein eL43B

1

2

High-throughput

0.479

High

509855

RS6A
Small ribosomal subunit protein eS6A

1

2

High-throughput

0.479

High

509856

RL1A
Large ribosomal subunit protein uL1A

1

4

Small-scale

0.479

High

509857

RL2A
Large ribosomal subunit protein uL2A

1

2

High-throughput

0.479

High

509858

RL12B
Large ribosomal subunit protein uL11B

1

4

High-throughput

0.479

High

509859

YA11A
Transposon Ty1-A Gag polyprotein

1

2

High-throughput

0.479

High

509860

RL19B
Large ribosomal subunit protein eL19

1

3

High-throughput

0.479

High

509862

IF4A
ATP-dependent RNA helicase eIF4A

1

11

High-throughput

0.479

High

509864

RL3
Large ribosomal subunit protein uL3

1

3

High-throughput

0.479

High

509867

HSC82
ATP-dependent molecular chaperone HSC82

1

11

High-throughput

0.479

High

509869

VPS1
Vacuolar protein sorting-associated protein 1

1

5

High-throughput

0.479

High

509872

IF5A1
Eukaryotic translation initiation factor 5A-1

1

4

High-throughput

0.479

High

509874

RV161
Reduced viability upon starvation protein 161

1

3

High-throughput

0.479

High

509877

RL5
Large ribosomal subunit protein uL18

1

2

High-throughput

0.479

High

509878

RL16A
Large ribosomal subunit protein uL13A

1

5

High-throughput

0.479

High

509879

RL16B
Large ribosomal subunit protein uL13B

1

5

High-throughput

0.479

High

509882

ZUO1
Zuotin

1

3

High-throughput

0.479

High

509892

AIM4
Altered inheritance of mitochondria protein 4

1

1

High-throughput

0.479

High

509893

SSZ1
Ribosome-associated complex subunit SSZ1

1

4

High-throughput

0.479

High

509894

NMD3
60S ribosomal export protein NMD3

1

1

High-throughput

0.479

High

509895

END3
Actin cytoskeleton-regulatory complex protein END3

1

3

High-throughput

0.479

High

509896

DHH1
ATP-dependent RNA helicase DHH1

1

9

High-throughput

0.479

High

509897

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.479

High

509902

DSN1
Kinetochore-associated protein DSN1

1

1

High-throughput

0.479

High

509903

RLP7
Ribosome biogenesis protein RLP7

1

7

High-throughput

0.479

High

509904

ELP2
Elongator complex protein 2

1

3

High-throughput

0.479

High

509906

RSSA2
Small ribosomal subunit protein uS2B

1

4

High-throughput

0.479

High

509907

ALB1
Ribosome biogenesis protein ALB1

1

1

High-throughput

0.479

High

509909

MOG1
Nuclear import protein MOG1

1

2

High-throughput

0.479

High

509911

RL4B
Large ribosomal subunit protein uL4B

1

5

High-throughput

0.479

High

509916

JJJ1
J protein JJJ1

1

5

High-throughput

0.479

High

509921

RL6A
Large ribosomal subunit protein eL6A

1

3

High-throughput

0.479

High

509923

ARX1
Probable metalloprotease ARX1

1

1

High-throughput

0.479

High

509925

IMB1
Importin subunit beta-1

1

7

High-throughput

0.479

High

509926

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

1

High-throughput

0.479

High

509927

URN1
Pre-mRNA-splicing factor URN1

1

2

High-throughput

0.479

High

509929

REH1
Cytoplasmic 60S subunit biogenesis factor REH1

1

5

High-throughput

0.479

High

509937

HIF1
HAT1-interacting factor 1

1

1

High-throughput

0.479

High

509938

GST2
Glutathione S-transferase 2

1

5

High-throughput

0.479

High

509939

RL21B
Large ribosomal subunit protein eL21B

1

3

High-throughput

0.479

High

509940

RL13A
Large ribosomal subunit protein eL13A

1

3

High-throughput

0.479

High

509941

SMC6
Structural maintenance of chromosomes protein 6

1

4

High-throughput

0.479

High

509928

ELP1
Elongator complex protein 1

1

0

High-throughput

0.458

High

509900

SSB2
Ribosome-associated molecular chaperone SSB2

1

9

High-throughput

0.445

High

509931

RLP24
Ribosome biogenesis protein RLP24

1

5

Small-scale

0.445

High

509935

NOP53
Ribosome biogenesis protein NOP53

1

2

Small-scale

0.445

High

399784

COX4
Cytochrome c oxidase subunit 4, mitochondrial

1

2

High-throughput

0.437

High

509863

ACOX
Acyl-coenzyme A oxidase

1

5

High-throughput

0.437

High

509866

GFA1
Glutamine--fructose-6-phosphate aminotransferase [isomerizing]

1

2

High-throughput

0.437

High

509875

KRR1
KRR1 small subunit processome component

1

2

High-throughput

0.437

High

509881

VATC
V-type proton ATPase subunit C

1

2

High-throughput

0.437

High

509883

SPT16
FACT complex subunit SPT16

1

2

High-throughput

0.437

High

509889

ETR1
Enoyl-[acyl-carrier-protein] reductase, mitochondrial

1

8

High-throughput

0.437

High

509901

CYB5
Cytochrome b5

1

3

High-throughput

0.437

High

509918

NUM1
Nuclear migration protein NUM1

1

4

High-throughput

0.437

High

509924

COX20
Cytochrome c oxidase assembly protein COX20, mitochondrial

1

2

High-throughput

0.437

High

509933

AP3D
AP-3 complex subunit delta

1

10

High-throughput

0.437

High

509934

TGL5
Triacylglycerol lipase 5

1

1

High-throughput

0.437

High

509930

LEC1
PX domain-containing protein LEC1

1

0

Small-scale

0.251

Low

367213

ATP6
ATP synthase subunit a

1

0

Small-scale

0.249

Low

509899

FMP10
Uncharacterized mitochondrial membrane protein FMP10

1

0

High-throughput

0.249

Low

509910

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

509914

YGL7
Uncharacterized protein YGL117W

1

0

High-throughput

0.249

Low

509917

SLG1
Protein SLG1

1

0

Small-scale

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025