Protein: RL9A
Large ribosomal subunit protein uL6A (60S ribosomal protein L9-A) (L8) (RP24) (YL11)

Gene: RL9A, RPL9A
Organism: Saccharomyces cerevisiae S288C
Interactions: 199
UniProt ID: P05738

Gene Ontology (top 5):
GO:0002181 - cytoplasmic translation
GO:0003735 - structural constituent of ribosome
GO:0005829 - cytosol
GO:0019843 - rRNA binding
GO:0022625 - cytosolic large ribosomal subunit

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

432877

RL9B
Large ribosomal subunit protein uL6B

2

0

High-throughput

0.716

High

432786

HSP71
Heat shock protein SSA1

4

4

High-throughput

0.672

High

391970

HSP82
ATP-dependent molecular chaperone HSP82

3

1

High-throughput

0.640

High

432808

RL16A
Large ribosomal subunit protein uL13A

3

4

High-throughput

0.640

High

427052

RLA0
Large ribosomal subunit protein uL10

1

3

High-throughput

0.618

High

432773

RL40A
Ubiquitin-ribosomal protein eL40A fusion protein [Cleaved into: Ubiquitin; Large ribosomal subunit protein eL40A

1

5

High-throughput

0.618

High

432847

IF2P
Eukaryotic translation initiation factor 5B

1

2

High-throughput

0.618

High

432889

BRE5
UBP3-associated protein BRE5

2

1

High-throughput

0.611

High

432900

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

2

0

High-throughput

0.585

High

409819

RL25
Large ribosomal subunit protein uL23

2

1

High-throughput

0.584

High

432757

RL26A
Large ribosomal subunit protein uL24A

2

3

High-throughput

0.584

High

432771

RL31A
Large ribosomal subunit protein eL31A

2

1

High-throughput

0.584

High

432825

RL14A
Large ribosomal subunit protein eL14A

2

3

High-throughput

0.584

High

432828

GBLP
Small ribosomal subunit protein RACK1

2

7

Small-scale

0.584

High

432866

RPN11
Ubiquitin carboxyl-terminal hydrolase RPN11

2

1

High-throughput

0.584

High

432928

TMA46
Translation machinery-associated protein 46

2

1

High-throughput

0.584

High

432815

ZUO1
Zuotin

2

2

High-throughput

0.571

High

432929

NOP53
Ribosome biogenesis protein NOP53

2

1

Small-scale

0.571

High

432819

MRT4
Ribosome assembly factor MRT4

1

3

High-throughput

0.553

High

432852

SSB2
Ribosome-associated molecular chaperone SSB2

2

4

High-throughput

0.552

High

432791

CAF20
Cap-associated protein CAF20

2

1

High-throughput

0.533

High

432859

DSN1
Kinetochore-associated protein DSN1

2

1

High-throughput

0.533

High

432890

NOG2
Nucleolar GTP-binding protein 2

2

3

Small-scale

0.533

High

432803

SIS1
Protein SIS1

1

1

High-throughput

0.515

High

432823

AP1B1
AP-1 complex subunit beta-1

1

0

High-throughput

0.513

High

432935

IF6
Eukaryotic translation initiation factor 6

1

0

High-throughput

0.513

High

432813

XPO1
Exportin-1

1

2

High-throughput

0.489

High

432894

NOP13
Nucleolar protein 13

1

1

High-throughput

0.489

High

154100

RL36B
Large ribosomal subunit protein eL36B

1

1

High-throughput

0.479

High

383039

RLA4
Large ribosomal subunit protein P2B

1

2

High-throughput

0.479

High

383228

RL28
Large ribosomal subunit protein uL15

1

2

High-throughput

0.479

High

383396

RS17A
Small ribosomal subunit protein eS17A

1

1

High-throughput

0.479

High

409642

RL24A
Large ribosomal subunit protein eL24A

1

4

High-throughput

0.479

High

414962

RL39
Large ribosomal subunit protein eL39

1

1

High-throughput

0.479

High

427507

RLA1
Large ribosomal subunit protein P1A

1

1

High-throughput

0.479

High

427629

RLA2
Large ribosomal subunit protein P2A

1

2

High-throughput

0.479

High

432429

RL7A
Large ribosomal subunit protein uL30A

1

6

High-throughput

0.479

High

432755

RL6B
Large ribosomal subunit protein eL6B

1

1

High-throughput

0.479

High

432756

RL17A
Large ribosomal subunit protein uL22A

1

3

High-throughput

0.479

High

432758

RL33A
Large ribosomal subunit protein eL33A

1

3

High-throughput

0.479

High

432760

RL15A
Large ribosomal subunit protein eL15A

1

1

High-throughput

0.479

High

432761

RL22A
Large ribosomal subunit protein eL22A

1

3

High-throughput

0.479

High

432762

RS3
Small ribosomal subunit protein uS3

1

2

High-throughput

0.479

High

432764

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

6

High-throughput

0.479

High

432767

RS19A
Small ribosomal subunit protein eS19A

1

1

High-throughput

0.479

High

432768

C1TM
C-1-tetrahydrofolate synthase, mitochondrial

1

1

High-throughput

0.479

High

432769

RS22A
Small ribosomal subunit protein uS8A

1

1

High-throughput

0.479

High

432772

RL31B
Large ribosomal subunit protein eL31B

1

1

High-throughput

0.479

High

432774

RL43B
Large ribosomal subunit protein eL43B

1

1

High-throughput

0.479

High

432776

RS6A
Small ribosomal subunit protein eS6A

1

1

High-throughput

0.479

High

432777

RS8A
Small ribosomal subunit protein eS8A

1

1

High-throughput

0.479

High

432778

RL1A
Large ribosomal subunit protein uL1A

1

3

High-throughput

0.479

High

432779

RL2A
Large ribosomal subunit protein uL2A

1

3

High-throughput

0.479

High

432780

RL18B
Large ribosomal subunit protein eL18B

1

2

High-throughput

0.479

High

432781

RL12B
Large ribosomal subunit protein uL11B

1

2

High-throughput

0.479

High

432782

RS18A
Small ribosomal subunit protein uS13A

1

1

High-throughput

0.479

High

432783

RL19B
Large ribosomal subunit protein eL19

1

2

High-throughput

0.479

High

432787

RLA3
Large ribosomal subunit protein P1B

1

1

High-throughput

0.479

High

432788

RL4A
Large ribosomal subunit protein uL4A

1

3

High-throughput

0.479

High

432793

RL30
Large ribosomal subunit protein eL30

1

1

High-throughput

0.479

High

432794

RL3
Large ribosomal subunit protein uL3

1

2

High-throughput

0.479

High

432795

HSC82
ATP-dependent molecular chaperone HSC82

1

1

High-throughput

0.479

High

432797

RL8A
Large ribosomal subunit protein eL8A

1

4

High-throughput

0.479

High

432801

RL24B
Large ribosomal subunit protein eL24B

1

4

High-throughput

0.479

High

432804

RS2
Small ribosomal subunit protein uS5

1

1

High-throughput

0.479

High

432806

CDC48
Cell division control protein 48

1

4

High-throughput

0.479

High

432807

RL5
Large ribosomal subunit protein uL18

1

2

High-throughput

0.479

High

432809

RL16B
Large ribosomal subunit protein uL13B

1

4

High-throughput

0.479

High

432812

RL8B
Large ribosomal subunit protein eL8B

1

4

High-throughput

0.479

High

432817

RSSA1
Small ribosomal subunit protein uS2A

1

1

High-throughput

0.479

High

432818

SMY2
Protein SMY2

1

1

High-throughput

0.479

High

432821

RS3A1
Small ribosomal subunit protein eS1A

1

2

High-throughput

0.479

High

432822

RS27A
Small ribosomal subunit protein eS27A

1

1

High-throughput

0.479

High

432826

RPF2
Ribosome biogenesis protein RPF2

1

1

Small-scale

0.479

High

432829

RL32
Large ribosomal subunit protein eL32

1

2

High-throughput

0.479

High

432833

RS20
Small ribosomal subunit protein uS10

1

1

High-throughput

0.479

High

432834

RL14B
Large ribosomal subunit protein eL14B

1

3

High-throughput

0.479

High

432836

SSZ1
Ribosome-associated complex subunit SSZ1

1

1

High-throughput

0.479

High

432838

NMD3
60S ribosomal export protein NMD3

1

1

High-throughput

0.479

High

432844

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.479

High

432846

RBG1
Ribosome-interacting GTPase 1

1

2

High-throughput

0.479

High

432853

RL13B
Large ribosomal subunit protein eL13B

1

2

High-throughput

0.479

High

432856

RL34B
Large ribosomal subunit protein eL34B

1

2

High-throughput

0.479

High

432860

RLP7
Ribosome biogenesis protein RLP7

1

6

High-throughput

0.479

High

432861

RL33B
Large ribosomal subunit protein eL33B

1

3

High-throughput

0.479

High

432862

RL10
Large ribosomal subunit protein uL16

1

2

High-throughput

0.479

High

432867

RL17B
Large ribosomal subunit protein uL22B

1

3

High-throughput

0.479

High

432873

RL37A
Large ribosomal subunit protein eL37A

1

1

High-throughput

0.479

High

432875

RL4B
Large ribosomal subunit protein uL4B

1

3

High-throughput

0.479

High

432876

PSD10
Probable 26S proteasome regulatory subunit p28

1

1

Small-scale

0.479

High

432878

RL37B
Large ribosomal subunit protein eL37B

1

1

High-throughput

0.479

High

432881

LSG1
Large subunit GTPase 1

1

3

High-throughput

0.479

High

432883

RL26B
Large ribosomal subunit protein uL24B

1

3

High-throughput

0.479

High

432885

PESC
Pescadillo homolog

1

1

High-throughput

0.479

High

432892

JJJ1
J protein JJJ1

1

3

High-throughput

0.479

High

432898

RL22B
Large ribosomal subunit protein eL22B

1

3

High-throughput

0.479

High

432899

RL34A
Large ribosomal subunit protein eL34A

1

2

High-throughput

0.479

High

432901

RS15
Small ribosomal subunit protein uS19

1

1

High-throughput

0.479

High

432902

RL6A
Large ribosomal subunit protein eL6A

1

1

High-throughput

0.479

High

432903

RL21A
Large ribosomal subunit protein eL21A

1

2

High-throughput

0.479

High

432911

HMO1
High mobility group protein 1

1

3

High-throughput

0.479

High

432913

RRP17
Ribosomal RNA-processing protein 17

1

1

High-throughput

0.479

High

432915

VMS1
tRNA endonuclease VMS1

1

2

High-throughput

0.479

High

432918

LTN1
E3 ubiquitin-protein ligase listerin

1

1

Small-scale

0.479

High

432923

ELP1
Elongator complex protein 1

1

1

High-throughput

0.479

High

432927

RS10A
Small ribosomal subunit protein eS10A

1

1

High-throughput

0.479

High

432932

RL7B
Large ribosomal subunit protein uL30B

1

6

High-throughput

0.479

High

432937

RL21B
Large ribosomal subunit protein eL21B

1

2

High-throughput

0.479

High

432938

RL13A
Large ribosomal subunit protein eL13A

1

2

High-throughput

0.479

High

432939

RL11B
Large ribosomal subunit protein uL5B

1

2

High-throughput

0.479

High

149465

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.458

High

432759

RL29
Large ribosomal subunit protein eL29

1

0

High-throughput

0.458

High

432763

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

432766

RS14A
Small ribosomal subunit protein uS11A

1

0

High-throughput

0.458

High

432770

RL27B
Large ribosomal subunit protein eL27B

1

0

High-throughput

0.458

High

432775

RS30A
Small ribosomal subunit protein eS30A

1

0

High-throughput

0.458

High

432784

RL35A
Large ribosomal subunit protein uL29A

1

0

High-throughput

0.458

High

432785

RS32B
Small ribosomal subunit protein eS32B

1

0

High-throughput

0.458

High

432790

PDR1
Transcription factor PDR1

1

0

High-throughput

0.458

High

432796

EF3A
Elongation factor 3A

1

0

High-throughput

0.458

High

432799

PSB4
Proteasome subunit beta type-4

1

0

Small-scale

0.458

High

432810

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.458

High

432816

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

High-throughput

0.458

High

432831

GID4
GID complex substrate-recognition subunit 4

1

0

High-throughput

0.458

High

432839

RIX1
Pre-rRNA-processing protein RIX1

1

0

Small-scale

0.458

High

432871

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.458

High

432874

RL38
Large ribosomal subunit protein eL38

1

0

High-throughput

0.458

High

432879

DXO
Decapping nuclease RAI1

1

0

Small-scale

0.458

High

432912

SCC2
Sister chromatid cohesion protein 2

1

0

High-throughput

0.458

High

432922

NOC4
Nucleolar complex protein 4

1

0

High-throughput

0.458

High

432930

CHS5
Chitin biosynthesis protein CHS5

1

0

High-throughput

0.458

High

432789

SSB1
Ribosome-associated molecular chaperone SSB1

1

4

High-throughput

0.445

High

432906

GCN5
Histone acetyltransferase GCN5

1

2

High-throughput

0.445

High

432933

SMT3
Ubiquitin-like protein SMT3

1

2

High-throughput

0.439

High

432765

SC160
Protein SCP160

1

4

High-throughput

0.437

High

432792

TBP
TATA-box-binding protein

1

1

High-throughput

0.437

High

432798

PWP1
Periodic tryptophan protein 1

1

5

High-throughput

0.437

High

432805

KRR1
KRR1 small subunit processome component

1

1

High-throughput

0.437

High

432811

TF2B
Transcription initiation factor IIB

1

1

High-throughput

0.437

High

432820

PRS6A
26S proteasome regulatory subunit 6A

1

1

High-throughput

0.437

High

432827

GLYM
Serine hydroxymethyltransferase, mitochondrial

1

1

High-throughput

0.437

High

432830

RDH54
DNA repair and recombination protein RDH54

1

3

High-throughput

0.437

High

432835

RPN1
26S proteasome regulatory subunit RPN1

1

1

High-throughput

0.437

High

432842

STM1
Suppressor protein STM1

1

1

High-throughput

0.437

High

432843

DHH1
ATP-dependent RNA helicase DHH1

1

2

High-throughput

0.437

High

432849

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

2

High-throughput

0.437

High

432850

IF4F2
Eukaryotic initiation factor 4F subunit p130

1

2

High-throughput

0.437

High

432855

TM108
Protein TMA108

1

1

High-throughput

0.437

High

432863

ELP2
Elongator complex protein 2

1

5

High-throughput

0.437

High

432864

UTP10
U3 small nucleolar RNA-associated protein 10

1

1

High-throughput

0.437

High

432868

ALB1
Ribosome biogenesis protein ALB1

1

1

High-throughput

0.437

High

432869

MOG1
Nuclear import protein MOG1

1

1

High-throughput

0.437

High

432880

VID30
GID complex subunit 1

1

1

High-throughput

0.437

High

432884

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

2

High-throughput

0.437

High

432886

SDA1
Protein SDA1

1

1

High-throughput

0.437

High

432887

H1
Histone H1

1

1

High-throughput

0.437

High

432888

PPID
Peptidyl-prolyl cis-trans isomerase CPR6

1

2

Small-scale

0.437

High

432891

GIS2
Zinc finger protein GIS2

1

1

High-throughput

0.437

High

432893

IPI3
Pre-rRNA-processing protein IPI3

1

2

High-throughput

0.437

High

432897

FAP1
FKBP12-associated protein 1

1

1

High-throughput

0.437

High

432905

TOM1
E3 ubiquitin-protein ligase TOM1

1

2

High-throughput

0.437

High

432907

HAS1
ATP-dependent RNA helicase HAS1

1

3

High-throughput

0.437

High

432909

ARX1
Probable metalloprotease ARX1

1

3

High-throughput

0.437

High

432910

MTQ2
eRF1 methyltransferase catalytic subunit MTQ2

1

1

High-throughput

0.437

High

432914

DHR1
Probable ATP-dependent RNA helicase DHR1

1

3

High-throughput

0.437

High

432924

VAM6
Vacuolar morphogenesis protein 6

1

1

High-throughput

0.437

High

432925

RIX7
Ribosome biogenesis ATPase RIX7

1

4

High-throughput

0.437

High

432926

SGO1
Shugoshin

1

1

High-throughput

0.437

High

432934

DBP10
ATP-dependent RNA helicase DBP10

1

4

High-throughput

0.437

High

432936

RQC2
Ribosome quality control complex subunit 2

1

1

High-throughput

0.437

High

432921

HSP7Q
Iron-sulfur cluster biogenesis chaperone, mitochondrial

1

7

High-throughput

0.407

High

432919

RQC1
Ribosome quality control complex subunit 1

3

0

Small-scale

0.334

High

432865

LOC1
60S ribosomal subunit assembly/export protein LOC1

1

0

High-throughput

0.279

Low

364216

CDK1
Cyclin-dependent kinase 1

1

0

High-throughput

0.249

Low

432800

KCC2
Calcium/calmodulin-dependent protein kinase II

1

0

High-throughput

0.249

Low

432802

DBP2
ATP-dependent RNA helicase DBP2

1

0

High-throughput

0.249

Low

432814

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.249

Low

432824

EAP1
Protein EAP1

1

0

High-throughput

0.249

Low

432832

ENP1
Essential nuclear protein 1

1

0

High-throughput

0.249

Low

432841

UME6
Transcriptional regulatory protein UME6

1

0

High-throughput

0.249

Low

432845

ECM1
Shuttling pre-60S factor ECM1

1

0

High-throughput

0.249

Low

432848

NOC2
Nucleolar complex protein 2

1

0

Small-scale

0.249

Low

432851

THO1
Protein THO1

1

0

High-throughput

0.249

Low

432854

YIQ1
Uncharacterized protein YIL161W

1

0

High-throughput

0.249

Low

432857

ULP2
Ubiquitin-like-specific protease 2

1

0

Small-scale

0.249

Low

432858

SNL1
HSP70 co-chaperone SNL1

1

0

Small-scale

0.249

Low

432872

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

432895

NST1
Stress response protein NST1

1

0

High-throughput

0.249

Low

432896

SAM50
Sorting assembly machinery 50 kDa subunit

1

0

High-throughput

0.249

Low

432904

ELP3
Elongator complex protein 3

1

0

High-throughput

0.249

Low

432908

CLU
Clustered mitochondria protein 1

1

0

High-throughput

0.249

Low

432916

VBA4
Vacuolar basic amino acid transporter 4

1

0

High-throughput

0.249

Low

432917

POB3
FACT complex subunit POB3

1

0

High-throughput

0.249

Low

432920

YL278
Uncharacterized transcriptional regulatory protein YLR278C

1

0

High-throughput

0.249

Low

432931

YRA1
RNA annealing protein YRA1

1

0

High-throughput

0.249

Low

432837

RPF1
Ribosome production factor 1

1

0

High-throughput

0.232

Low

432840

BFR1
Nuclear segregation protein BFR1

1

0

High-throughput

0.232

Low

432870

HLJ1
Protein HLJ1

1

0

High-throughput

0.232

Low

432882

CGR1
rRNA-processing protein CGR1

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025