Protein: DCA13
Protein SOF1 (U3 small nucleolar RNA-associated protein SOF1) (U3 snoRNA-associated protein SOF1)

Gene: DCA13, SOF1
Organism: Saccharomyces cerevisiae S288C
Interactions: 145
UniProt ID: P33750

Gene Ontology (top 5):
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003729 - mRNA binding
GO:0005654 - nucleoplasm
GO:0005730 - nucleolus
GO:0030490 - maturation of SSU-rRNA

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

635565

PWP2
Periodic tryptophan protein 2

6

18

Small-scale

0.945

High

707094

UTP7
U3 small nucleolar RNA-associated protein 7

2

18

High-throughput

0.793

High

707138

UTP21
U3 small nucleolar RNA-associated protein 21

2

19

Small-scale

0.754

High

707144

RRP9
Ribosomal RNA-processing protein 9

2

20

High-throughput

0.754

High

707147

UTP4
U3 small nucleolar RNA-associated protein 4

2

19

Small-scale

0.754

High

707079

ENP1
Essential nuclear protein 1

8

1

Small-scale

0.747

High

707145

NOC4
Nucleolar complex protein 4

7

7

Small-scale

0.743

High

634544

KRR1
KRR1 small subunit processome component

5

1

High-throughput

0.716

High

707104

UTP10
U3 small nucleolar RNA-associated protein 10

5

4

High-throughput

0.714

High

707120

UBP10
Ubiquitin carboxyl-terminal hydrolase 10

1

17

High-throughput

0.698

High

707130

DHR1
Probable ATP-dependent RNA helicase DHR1

4

12

Small-scale

0.676

High

707126

UTP6
U3 small nucleolar RNA-associated protein 6

3

3

High-throughput

0.667

High

707133

UTP14
U3 small nucleolar RNA-associated protein 14

3

10

High-throughput

0.658

High

707121

NAT10
RNA cytidine acetyltransferase

3

3

High-throughput

0.656

High

707134

RRP5
rRNA biogenesis protein RRP5

3

14

High-throughput

0.656

High

707164

NOP58
Nucleolar protein 58

3

10

Small-scale

0.640

High

707085

UTP9
U3 small nucleolar RNA-associated protein 9

3

0

High-throughput

0.638

High

707107

MTR4
ATP-dependent RNA helicase DOB1

1

19

High-throughput

0.618

High

707114

EIF2A
Eukaryotic translation initiation factor 2A

1

1

High-throughput

0.618

High

707127

UTP17
NET1-associated nuclear protein 1

1

17

High-throughput

0.618

High

707131

UTP15
U3 small nucleolar RNA-associated protein 15

1

17

High-throughput

0.618

High

707137

UTP13
U3 small nucleolar RNA-associated protein 13

1

19

High-throughput

0.618

High

707160

UTP12
U3 small nucleolar RNA-associated protein 12

1

19

High-throughput

0.618

High

549368

FBRL
rRNA 2'-O-methyltransferase fibrillarin

2

5

Small-scale

0.601

High

707097

UTP18
U3 small nucleolar RNA-associated protein 18

1

0

High-throughput

0.586

High

707102

FAF1
Protein FAF1

2

0

Small-scale

0.585

High

366063

HSP82
ATP-dependent molecular chaperone HSP82

3

13

High-throughput

0.585

High

707119

CSL4
Exosome complex component CSL4

2

1

High-throughput

0.584

High

490788

HSP71
Heat shock protein SSA1

3

9

High-throughput

0.578

High

707124

ACT
Actin

1

6

High-throughput

0.578

High

707110

MPP10
U3 small nucleolar RNA-associated protein MPP10

2

6

Small-scale

0.571

High

357977

RS17A
Small ribosomal subunit protein eS17A

1

1

High-throughput

0.553

High

707075

DOA1
Protein DOA1

1

16

Small-scale

0.553

High

707078

GBLP
Small ribosomal subunit protein RACK1

1

20

High-throughput

0.553

High

707113

RS12
Small ribosomal subunit protein eS12

1

3

High-throughput

0.553

High

519921

TCPA
T-complex protein 1 subunit alpha

2

20

High-throughput

0.549

High

707090

TCPZ
T-complex protein 1 subunit zeta

2

20

High-throughput

0.549

High

707139

MRD1
Multiple RNA-binding domain-containing protein 1

1

2

Small-scale

0.536

High

470965

RS22A
Small ribosomal subunit protein uS8A

2

2

High-throughput

0.533

High

560624

BIP
Endoplasmic reticulum chaperone BiP

2

9

High-throughput

0.533

High

687917

IMB3
Importin subunit beta-3

1

5

Small-scale

0.512

High

707080

KSP1
Serine/threonine-protein kinase KSP1

1

5

High-throughput

0.501

High

707087

TCPB
T-complex protein 1 subunit beta

1

20

High-throughput

0.489

High

707088

TCPG
T-complex protein 1 subunit gamma

1

20

High-throughput

0.489

High

707098

TCPE
T-complex protein 1 subunit epsilon

1

20

High-throughput

0.489

High

554615

HSP26
Heat shock protein 26

1

0

High-throughput

0.479

High

406933

RS3
Small ribosomal subunit protein uS3

1

5

High-throughput

0.479

High

407830

RS13
Small ribosomal subunit protein uS15

1

3

High-throughput

0.479

High

413416

RS14A
Small ribosomal subunit protein uS11A

1

4

High-throughput

0.479

High

480019

RS6A
Small ribosomal subunit protein eS6A

1

3

High-throughput

0.479

High

480583

RS8A
Small ribosomal subunit protein eS8A

1

4

High-throughput

0.479

High

593617

DBP4
ATP-dependent RNA helicase HCA4

1

17

High-throughput

0.479

High

606609

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

1

High-throughput

0.479

High

631779

RS2
Small ribosomal subunit protein uS5

1

4

High-throughput

0.479

High

700056

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

4

High-throughput

0.479

High

700317

RSSA1
Small ribosomal subunit protein uS2A

1

2

High-throughput

0.479

High

706180

RS3A1
Small ribosomal subunit protein eS1A

1

1

High-throughput

0.479

High

707074

RS27A
Small ribosomal subunit protein eS27A

1

1

High-throughput

0.479

High

707076

RL1D1
Ribosome biogenesis protein UTP30

1

7

High-throughput

0.479

High

707081

RS20
Small ribosomal subunit protein uS10

1

1

High-throughput

0.479

High

707082

DBP8
ATP-dependent RNA helicase DBP8

1

14

High-throughput

0.479

High

707083

RRP4
Exosome complex component RRP4

1

5

High-throughput

0.479

High

707099

MLP2
Protein MLP2

1

17

High-throughput

0.479

High

707105

ROK1
ATP-dependent RNA helicase ROK1

1

11

High-throughput

0.479

High

707106

RRP41
Exosome complex component SKI6

1

6

High-throughput

0.479

High

707108

NOP9
Nucleolar protein 9

1

1

Small-scale

0.479

High

707111

NOL10
Ribosome biogenesis protein ENP2

1

2

High-throughput

0.479

High

707115

UTP22
U3 small nucleolar RNA-associated protein 22

1

2

High-throughput

0.479

High

707116

RRP46
Exosome complex component RRP46

1

6

High-throughput

0.479

High

707118

ESF2
Pre-rRNA-processing protein ESF2

1

2

High-throughput

0.479

High

707122

NOP15
Ribosome biogenesis protein 15

1

12

High-throughput

0.479

High

707123

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

1

High-throughput

0.479

High

707129

UTP5
U3 small nucleolar RNA-associated protein 5

1

17

High-throughput

0.479

High

707136

RRP45
Exosome complex component RRP45

1

5

High-throughput

0.479

High

707140

SGD1
Suppressor of glycerol defect protein 1

1

4

High-throughput

0.479

High

707146

BFR2
Protein BFR2

1

2

High-throughput

0.479

High

707151

RRP44
Exosome complex exonuclease DIS3

1

2

High-throughput

0.479

High

707152

RRP40
Exosome complex component RRP40

1

2

High-throughput

0.479

High

707155

BMS1
Ribosome biogenesis protein BMS1

1

8

High-throughput

0.479

High

707156

FCF2
rRNA-processing protein FCF2

1

1

High-throughput

0.479

High

707157

SAS10
Something about silencing protein 10

1

1

High-throughput

0.479

High

707158

RRP6
Exosome complex exonuclease RRP6

1

4

High-throughput

0.479

High

707159

MAK21
Ribosome biogenesis protein MAK21

1

7

High-throughput

0.479

High

707161

RRP42
Exosome complex component RRP42

1

5

High-throughput

0.479

High

707162

NOP56
Nucleolar protein 56

1

10

High-throughput

0.479

High

707165

RRP12
Ribosomal RNA-processing protein 12

1

1

High-throughput

0.479

High

707168

NOP14
Nucleolar complex protein 14

1

2

High-throughput

0.479

High

630174

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

630468

RRP7
Ribosomal RNA-processing protein 7

1

0

High-throughput

0.458

High

635106

YCQ6
Uncharacterized protein YCR016W

1

0

High-throughput

0.458

High

688183

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

707072

UTP11
U3 small nucleolar RNA-associated protein 11

1

0

High-throughput

0.458

High

707073

UTP20
U3 small nucleolar RNA-associated protein 20

1

0

High-throughput

0.458

High

707084

LRP1
Exosome complex protein LRP1

1

0

High-throughput

0.458

High

707086

RRP8
25S rRNA

1

0

High-throughput

0.458

High

707095

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

0

High-throughput

0.458

High

707100

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

707101

UTP25
U3 small nucleolar RNA-associated protein 25

1

0

High-throughput

0.458

High

707112

MTR3
Exosome complex component MTR3

1

0

High-throughput

0.458

High

707117

UTP8
U3 small nucleolar RNA-associated protein 8

1

0

High-throughput

0.458

High

707132

BUD22
Bud site selection protein 22

1

0

High-throughput

0.458

High

707135

FCF1
rRNA-processing protein FCF1

1

0

High-throughput

0.458

High

707142

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

0

High-throughput

0.458

High

707143

ESF1
Pre-rRNA-processing protein ESF1

1

0

High-throughput

0.458

High

707149

CMS1
Protein CMS1

1

0

High-throughput

0.458

High

707150

RCL1
RNA 3'-terminal phosphate cyclase-like protein

1

0

High-throughput

0.458

High

707154

UTP16
U3 small nucleolar RNA-associated protein 16

1

0

High-throughput

0.458

High

707163

RRP36
rRNA biogenesis protein RRP36

1

0

High-throughput

0.458

High

707166

EFG1P
rRNA-processing protein EFG1

1

0

High-throughput

0.458

High

707169

PNO1
Pre-rRNA-processing protein PNO1

1

0

High-throughput

0.458

High

629267

HAL4
Serine/threonine-protein kinase HAL4/SAT4

1

2

High-throughput

0.457

High

378326

LEU3
3-isopropylmalate dehydrogenase

1

4

High-throughput

0.457

High

421612

FAS1
Fatty acid synthase subunit beta

1

2

High-throughput

0.457

High

555948

VATB
V-type proton ATPase subunit B

1

5

High-throughput

0.457

High

588022

HSP60
Heat shock protein 60, mitochondrial

1

20

High-throughput

0.457

High

707089

TCPD
T-complex protein 1 subunit delta

1

20

High-throughput

0.457

High

707103

TCPH
T-complex protein 1 subunit eta

1

20

High-throughput

0.457

High

707109

TCPQ
T-complex protein 1 subunit theta

1

20

High-throughput

0.457

High

707077

RPF2
Ribosome biogenesis protein RPF2

1

2

High-throughput

0.445

High

408316

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

4

High-throughput

0.437

High

425861

RS19A
Small ribosomal subunit protein eS19A

1

3

High-throughput

0.437

High

472115

RL31A
Large ribosomal subunit protein eL31A

1

1

High-throughput

0.437

High

482179

RS18A
Small ribosomal subunit protein uS13A

1

2

High-throughput

0.437

High

661801

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.437

High

664741

BMH1
Protein BMH1

1

3

High-throughput

0.437

High

707092

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.437

High

707093

ARB1
ABC transporter ATP-binding protein ARB1

1

4

Small-scale

0.437

High

707125

RS15
Small ribosomal subunit protein uS19

1

2

High-throughput

0.437

High

707128

GIS1
Transcriptional activator/repressor GIS1

1

2

High-throughput

0.437

High

707141

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

1

High-throughput

0.437

High

707167

RS22B
Small ribosomal subunit protein uS8B

1

2

High-throughput

0.437

High

478059

HSP77
Import motor subunit, mitochondrial

1

11

High-throughput

0.407

High

493583

HSP72
Heat shock protein SSA2

1

10

High-throughput

0.407

High

510785

SSB1
Ribosome-associated molecular chaperone SSB1

1

10

High-throughput

0.407

High

627885

SIS1
Protein SIS1

1

9

High-throughput

0.407

High

694403

HSP7F
Heat shock protein homolog SSE1

1

14

High-throughput

0.407

High

704998

HSP78
Heat shock protein 78, mitochondrial

1

1

High-throughput

0.407

High

707091

CAJ1
Protein CAJ1

1

11

High-throughput

0.407

High

707096

SSB2
Ribosome-associated molecular chaperone SSB2

1

10

High-throughput

0.407

High

640307

MGMT
Methylated-DNA--protein-cysteine methyltransferase

1

0

High-throughput

0.279

Low

343579

PMG1
Phosphoglycerate mutase 1

1

0

High-throughput

0.261

Low

524247

CAF20
Cap-associated protein CAF20

1

0

High-throughput

0.249

Low

700825

SMY2
Protein SMY2

1

0

High-throughput

0.249

Low

707148

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

707153

SGO1
Shugoshin

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024