Protein: RT28
Small ribosomal subunit protein bS1m (28S ribosomal protein S28, mitochondrial) (MRP-S28) (S28mt) (28S ribosomal protein S35, mitochondrial) (MRP-S35) (S35mt)

Gene: RT28, MRPS28
Organism: Homo sapiens
Interactions: 202
UniProt ID: Q9Y2Q9

Gene Ontology (top 5):
GO:0003723 - RNA binding
GO:0005739 - mitochondrion
GO:0005743 - mitochondrial inner membrane
GO:0005763 - mitochondrial small ribosomal subunit
GO:0032543 - mitochondrial translation

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1490866

RT02
Small ribosomal subunit protein uS2m

5

1

High-throughput

0.922

High

1490869

RT23
Small ribosomal subunit protein mS23

4

0

High-throughput

0.840

High

1013025

RT09
Small ribosomal subunit protein uS9m

3

1

High-throughput

0.640

High

1244182

TM10B
tRNA methyltransferase 10 homolog B

3

0

High-throughput

0.638

High

1012380

RT15
Small ribosomal subunit protein uS15m

2

1

High-throughput

0.628

High

1012659

RT34
Small ribosomal subunit protein mS34

2

1

High-throughput

0.628

High

1087622

GRSF1
G-rich sequence factor 1

3

0

Small-scale

0.613

High

1012284

RT11
Small ribosomal subunit protein uS11m

2

0

High-throughput

0.602

High

1364431

RT27
Small ribosomal subunit protein mS27

2

0

High-throughput

0.602

High

994881

YBOX1
Y-box-binding protein 1

2

1

Small-scale

0.601

High

1123481

ICT1
Large ribosomal subunit protein mL62

2

0

High-throughput

0.585

High

1418937

RT26
Small ribosomal subunit protein mS26

2

0

High-throughput

0.585

High

1366474

RT31
Small ribosomal subunit protein mS31

2

1

High-throughput

0.584

High

279977

CISY
Citrate synthase, mitochondrial

2

0

High-throughput

0.559

High

1058357

C1QBP
Complement component 1 Q subcomponent-binding protein, mitochondrial

2

0

Small-scale

0.559

High

1162623

CLPP
ATP-dependent Clp protease proteolytic subunit, mitochondrial

2

0

High-throughput

0.559

High

1024237

TFAM
Transcription factor A, mitochondrial

2

0

High-throughput

0.547

High

1048757

SSBP
Single-stranded DNA-binding protein, mitochondrial

2

0

High-throughput

0.547

High

576599

HNRPL
Heterogeneous nuclear ribonucleoprotein L

1

1

High-throughput

0.536

High

1011408

RT25
Small ribosomal subunit protein mS25

1

1

High-throughput

0.536

High

1016676

SRSF3
Serine/arginine-rich splicing factor 3

1

1

High-throughput

0.536

High

1160131

SRSF7
Serine/arginine-rich splicing factor 7

1

1

High-throughput

0.536

High

1490865

RT17
Small ribosomal subunit protein uS17m

1

1

High-throughput

0.536

High

1490868

RT18C
Small ribosomal subunit protein bS18m

1

2

High-throughput

0.536

High

1490873

RT18B
Small ribosomal subunit protein mS40

1

1

High-throughput

0.536

High

373550

MYC
Myc proto-oncogene protein

2

1

High-throughput

0.533

High

872910

SOX2
Transcription factor SOX-2

2

1

High-throughput

0.521

High

860415

RS9
Small ribosomal subunit protein uS4

1

0

High-throughput

0.513

High

1009371

PRR3
Proline-rich protein 3

1

0

High-throughput

0.513

High

1027863

HNRPU
Heterogeneous nuclear ribonucleoprotein U

1

0

High-throughput

0.513

High

1127261

RBM39
RNA-binding protein 39

1

0

High-throughput

0.513

High

1148832

RBMS2
RNA-binding motif, single-stranded-interacting protein 2

1

0

High-throughput

0.513

High

1309088

FABD
Malonyl-CoA-acyl carrier protein transacylase, mitochondrial

1

0

High-throughput

0.513

High

1411912

UTP23
rRNA-processing protein UTP23 homolog

1

0

High-throughput

0.513

High

1490874

CFA20
Cilia- and flagella-associated protein 20

1

0

High-throughput

0.513

High

1197134

AMOT
Angiomotin

1

1

High-throughput

0.489

High

508865

UBC
Polyubiquitin-C [Cleaved into: Ubiquitin]

1

0

High-throughput

0.480

High

243338

PRKN
E3 ubiquitin-protein ligase parkin

1

1

High-throughput

0.479

High

282129

MPPB
Mitochondrial-processing peptidase subunit beta

1

1

High-throughput

0.479

High

287411

RF1M
Peptide chain release factor 1, mitochondrial

1

2

High-throughput

0.479

High

856429

IF2M
Translation initiation factor IF-2, mitochondrial

1

1

High-throughput

0.479

High

902637

RT29
Small ribosomal subunit protein mS29

1

1

High-throughput

0.479

High

990899

1433Z
14-3-3 protein zeta/delta

1

1

High-throughput

0.479

High

1011558

RT10
Small ribosomal subunit protein uS10m

1

1

High-throughput

0.479

High

1011749

RT35
Small ribosomal subunit protein mS35

1

1

High-throughput

0.479

High

1023304

RBM3
RNA-binding protein 3

1

1

Small-scale

0.479

High

1049932

1433F
14-3-3 protein eta

1

1

High-throughput

0.479

High

1083799

MPPA
Mitochondrial-processing peptidase subunit alpha

1

1

High-throughput

0.479

High

1135952

FAKD3
FAST kinase domain-containing protein 3, mitochondrial

1

3

High-throughput

0.479

High

1138778

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

1

High-throughput

0.479

High

1240361

RUSD3
Mitochondrial mRNA pseudouridine synthase RPUSD3

1

1

High-throughput

0.479

High

1273034

FAKD5
FAST kinase domain-containing protein 5, mitochondrial

1

3

High-throughput

0.479

High

1290194

THOC4
THO complex subunit 4

1

2

High-throughput

0.479

High

1337251

MCU
Calcium uniporter protein, mitochondrial

1

1

High-throughput

0.479

High

1381142

RRF2M
Ribosome-releasing factor 2, mitochondrial

1

2

High-throughput

0.479

High

1381778

FAKD4
FAST kinase domain-containing protein 4

1

3

High-throughput

0.479

High

1383578

MCUR1
Mitochondrial calcium uniporter regulator 1

1

1

High-throughput

0.479

High

1386053

RUSD4
Pseudouridylate synthase RPUSD4, mitochondrial

1

1

High-throughput

0.479

High

1387245

TIM14
Mitochondrial import inner membrane translocase subunit TIM14

1

1

High-throughput

0.479

High

1389242

RT24
Small ribosomal subunit protein uS3m

1

1

High-throughput

0.479

High

1401659

EFGM
Elongation factor G, mitochondrial

1

2

High-throughput

0.479

High

1428832

CC90B
Coiled-coil domain-containing protein 90B, mitochondrial

1

1

High-throughput

0.479

High

1432651

MTRFR
Mitochondrial translation release factor in rescue

1

2

High-throughput

0.479

High

1451272

MCUB
Calcium uniporter regulatory subunit MCUb, mitochondrial

1

1

High-throughput

0.479

High

1452862

FAKD2
FAST kinase domain-containing protein 2, mitochondrial

1

3

High-throughput

0.479

High

1459174

RF1ML
Peptide chain release factor 1-like, mitochondrial

1

2

High-throughput

0.479

High

1490872

DJC15
DnaJ homolog subfamily C member 15

1

1

High-throughput

0.479

High

61685

VWA8
von Willebrand factor A domain-containing protein 8

1

0

High-throughput

0.458

High

66336

MET15
12S rRNA N(4)-cytidine methyltransferase METTL15

1

0

High-throughput

0.458

High

183774

RT12
Small ribosomal subunit protein uS12m

1

0

High-throughput

0.458

High

256411

RT14
Small ribosomal subunit protein uS14m

1

0

High-throughput

0.458

High

348803

AIFM1
Apoptosis-inducing factor 1, mitochondrial

1

0

High-throughput

0.458

High

351041

TRUB2
Pseudouridylate synthase TRUB2, mitochondrial

1

0

High-throughput

0.458

High

361667

OTC
Ornithine transcarbamylase, mitochondrial

1

0

High-throughput

0.458

High

401729

RAF1
RAF proto-oncogene serine/threonine-protein kinase

1

0

High-throughput

0.458

High

414888

P53
Cellular tumor antigen p53

1

0

High-throughput

0.458

High

471330

ODPA
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

1

0

High-throughput

0.458

High

473193

RU17
U1 small nuclear ribonucleoprotein 70 kDa

1

0

High-throughput

0.458

High

485526

ROA1
Heterogeneous nuclear ribonucleoprotein A1

1

0

High-throughput

0.458

High

519270

COX8A
Cytochrome c oxidase subunit 8A, mitochondrial

1

0

High-throughput

0.458

High

533084

CH60
60 kDa heat shock protein, mitochondrial

1

0

High-throughput

0.458

High

560131

COX41
Cytochrome c oxidase subunit 4 isoform 1, mitochondrial

1

0

High-throughput

0.458

High

786308

LONM
Lon protease homolog, mitochondrial

1

0

High-throughput

0.458

High

829013

MDHM
Malate dehydrogenase, mitochondrial

1

0

High-throughput

0.458

High

842032

LPPRC
Leucine-rich PPR motif-containing protein, mitochondrial

1

0

High-throughput

0.458

High

852079

EFTS
Elongation factor Ts, mitochondrial

1

0

High-throughput

0.458

High

875842

PRC2A
Protein PRRC2A

1

0

High-throughput

0.458

High

882956

EFTU
Elongation factor Tu, mitochondrial

1

0

High-throughput

0.458

High

905311

MECP2
Methyl-CpG-binding protein 2

1

0

High-throughput

0.458

High

939839

ATPK
ATP synthase F(0) complex subunit f, mitochondrial

1

0

High-throughput

0.458

High

991778

DYL1
Dynein light chain 1, cytoplasmic

1

0

High-throughput

0.458

High

1062863

QOR
Quinone oxidoreductase

1

0

High-throughput

0.458

High

1090596

TRAP1
Heat shock protein 75 kDa, mitochondrial

1

0

High-throughput

0.458

High

1108301

SQSTM
Sequestosome-1

1

0

High-throughput

0.458

High

1117881

AUHM
Methylglutaconyl-CoA hydratase, mitochondrial

1

0

High-throughput

0.458

High

1149648

SURF1
Surfeit locus protein 1

1

0

High-throughput

0.458

High

1194469

LARP7
La-related protein 7

1

0

High-throughput

0.458

High

1207184

SYAM
Alanine--tRNA ligase, mitochondrial

1

0

High-throughput

0.458

High

1234572

MRM1
rRNA methyltransferase 1, mitochondrial

1

0

High-throughput

0.458

High

1241365

CH082
UPF0598 protein C8orf82

1

0

High-throughput

0.458

High

1270676

COX15
Heme A synthase COX15

1

0

High-throughput

0.458

High

1271617

DHX30
ATP-dependent RNA helicase DHX30

1

0

High-throughput

0.458

High

1271920

MEPCE
7SK snRNA methylphosphate capping enzyme

1

0

High-throughput

0.458

High

1275761

ZCCHV
Zinc finger CCCH-type antiviral protein 1

1

0

High-throughput

0.458

High

1310539

HSC20
Iron-sulfur cluster co-chaperone protein HscB

1

0

High-throughput

0.458

High

1369880

CELF1
CUGBP Elav-like family member 1

1

0

High-throughput

0.458

High

1384912

CHCH1
Small ribosomal subunit protein mS37

1

0

High-throughput

0.458

High

1387769

FMT
Methionyl-tRNA formyltransferase, mitochondrial

1

0

High-throughput

0.458

High

1388311

RRFM
Ribosome-recycling factor, mitochondrial

1

0

High-throughput

0.458

High

1388460

MTEF3
Transcription termination factor 3, mitochondrial

1

0

High-throughput

0.458

High

1390076

PTCD3
Small ribosomal subunit protein mS39

1

0

High-throughput

0.458

High

1400840

TEFM
Transcription elongation factor, mitochondrial

1

0

High-throughput

0.458

High

1410167

GRWD1
Glutamate-rich WD repeat-containing protein 1

1

0

High-throughput

0.458

High

1412480

TACO1
Translational activator of cytochrome c oxidase 1

1

0

High-throughput

0.458

High

1412618

CQ080
Mitochondrial nucleoid-associated protein 1

1

0

High-throughput

0.458

High

1413042

MTG1
Mitochondrial ribosome-associated GTPase 1

1

0

High-throughput

0.458

High

1414122

TMM70
Transmembrane protein 70, mitochondrial

1

0

High-throughput

0.458

High

1415714

TR61B
tRNA

1

0

High-throughput

0.458

High

1416583

HINT2
Adenosine 5'-monophosphoramidase HINT2

1

0

High-throughput

0.458

High

1428770

SLIRP
SRA stem-loop-interacting RNA-binding protein, mitochondrial

1

0

High-throughput

0.458

High

1432001

IF3M
Translation initiation factor IF-3, mitochondrial

1

0

High-throughput

0.458

High

1433757

MTG2
Mitochondrial ribosome-associated GTPase 2

1

0

High-throughput

0.458

High

1435837

MET17
Ribosome assembly protein METTL17, mitochondrial

1

0

High-throughput

0.458

High

1436142

ACAD9
Complex I assembly factor ACAD9, mitochondrial

1

0

High-throughput

0.458

High

1446281

NGRN
Neugrin

1

0

High-throughput

0.458

High

1449929

DDX28
Probable ATP-dependent RNA helicase DDX28

1

0

High-throughput

0.458

High

1450468

EXD2
Exonuclease 3'-5' domain-containing protein 2

1

0

High-throughput

0.458

High

1451360

RMND1
Required for meiotic nuclear division protein 1 homolog

1

0

High-throughput

0.458

High

1451469

AKIP
Small ribosomal subunit protein mS38

1

0

High-throughput

0.458

High

1453324

IF2B1
Insulin-like growth factor 2 mRNA-binding protein 1

1

0

High-throughput

0.458

High

1453977

MRES1
Mitochondrial transcription rescue factor 1

1

0

High-throughput

0.458

High

1490867

RM11
Large ribosomal subunit protein uL11m

1

0

High-throughput

0.458

High

951911

PTEN
Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN

1

1

High-throughput

0.457

High

217001

KLF4
Krueppel-like factor 4

1

2

High-throughput

0.457

High

725342

TLX1
T-cell leukemia homeobox protein 1

1

1

High-throughput

0.457

High

1460390

KLF15
Krueppel-like factor 15

1

2

High-throughput

0.457

High

1437417

LN28A
Protein lin-28 homolog A

1

1

High-throughput

0.445

High

226620

TLX2
T-cell leukemia homeobox protein 2

1

1

High-throughput

0.437

High

254453

CC14B
Dual specificity protein phosphatase CDC14B

1

2

High-throughput

0.437

High

406815

MYCN
N-myc proto-oncogene protein

1

1

High-throughput

0.437

High

648254

NDKB
Nucleoside diphosphate kinase B

1

1

High-throughput

0.437

High

1314114

AMOL1
Angiomotin-like protein 1

1

1

High-throughput

0.437

High

1372483

TP4A1
Protein tyrosine phosphatase type IVA 1

1

2

High-throughput

0.437

High

1490870

KLF12
Krueppel-like factor 12

1

3

High-throughput

0.437

High

775383

FUS
RNA-binding protein FUS

1

0

High-throughput

0.426

High

1057060

FMR1
Fragile X messenger ribonucleoprotein 1

1

0

High-throughput

0.426

High

1450604

ATD3A
ATPase family AAA domain-containing protein 3A

1

0

High-throughput

0.426

High

1181576

Q32Q12
Nucleoside diphosphate kinase

1

1

High-throughput

0.407

High

193313

SOCS1
Suppressor of cytokine signaling 1

2

0

High-throughput

0.298

High

1144559

PTPRR
Receptor-type tyrosine-protein phosphatase R

2

0

High-throughput

0.298

High

389575

FINC
Fibronectin

1

0

High-throughput

0.279

Low

517839

GLI4
Zinc finger protein GLI4

1

0

High-throughput

0.279

Low

625717

CSK22
Casein kinase II subunit alpha'

1

0

High-throughput

0.279

Low

641710

ERBB3
Receptor tyrosine-protein kinase erbB-3

1

0

High-throughput

0.279

Low

886620

CTCF
Transcriptional repressor CTCF

1

0

High-throughput

0.279

Low

1260461

H1FNT
Testis-specific H1 histone

1

0

High-throughput

0.279

Low

1358889

KBTB7
Kelch repeat and BTB domain-containing protein 7

1

0

High-throughput

0.279

Low

1361094

MYO3B
Myosin-IIIb

1

0

High-throughput

0.279

Low

1390661

NEIL1
Endonuclease 8-like 1

1

0

High-throughput

0.279

Low

1435744

CH033
UPF0488 protein C8orf33

1

0

High-throughput

0.279

Low

1490738

MAST1
Microtubule-associated serine/threonine-protein kinase 1

1

0

High-throughput

0.279

Low

787103

FLT3
Receptor-type tyrosine-protein kinase FLT3

1

0

High-throughput

0.269

Low

272562

OBSL1
Obscurin-like protein 1

1

0

High-throughput

0.249

Low

316185

RECQ4
ATP-dependent DNA helicase Q4

1

0

High-throughput

0.249

Low

320164

UFL1
E3 UFM1-protein ligase 1

1

0

High-throughput

0.249

Low

320802

UBXN7
UBX domain-containing protein 7

1

0

High-throughput

0.249

Low

325176

HEXI1
Protein HEXIM1

1

0

High-throughput

0.249

Low

504998

H2AB2
Histone H2A-Bbd type 2/3

1

0

High-throughput

0.249

Low

930090

UBP14
Ubiquitin carboxyl-terminal hydrolase 14

1

0

High-throughput

0.249

Low

937978

FOXA1
Hepatocyte nuclear factor 3-alpha

1

0

High-throughput

0.249

Low

971318

UBE2H
Ubiquitin-conjugating enzyme E2 H

1

0

High-throughput

0.249

Low

977173

YPEL5
Protein yippee-like 5

1

0

High-throughput

0.249

Low

998971

H31
Histone H3.1

1

0

High-throughput

0.249

Low

1015920

RHOG
Rho-related GTP-binding protein RhoG

1

0

High-throughput

0.249

Low

1114703

CUL3
Cullin-3

1

0

High-throughput

0.249

Low

1126217

GRM2
Metabotropic glutamate receptor 2

1

0

High-throughput

0.249

Low

1141074

KIF14
Kinesin-like protein KIF14

1

0

High-throughput

0.249

Low

1233596

LTOR1
Ragulator complex protein LAMTOR1

1

0

High-throughput

0.249

Low

1238512

ZN746
Zinc finger protein 746

1

0

High-throughput

0.249

Low

1253756

RHG36
Rho GTPase-activating protein 36

1

0

High-throughput

0.249

Low

1256176

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

1280064

FGD2
FYVE, RhoGEF and PH domain-containing protein 2

1

0

High-throughput

0.249

Low

1291292

CAND1
Cullin-associated NEDD8-dissociated protein 1

1

0

High-throughput

0.249

Low

1308757

M4K3
Mitogen-activated protein kinase kinase kinase kinase 3

1

0

High-throughput

0.249

Low

1310819

CUL9
Cullin-9

1

0

High-throughput

0.249

Low

1329019

ZBTB2
Zinc finger and BTB domain-containing protein 2

1

0

High-throughput

0.249

Low

1330984

CGAS
Cyclic GMP-AMP synthase

1

0

High-throughput

0.249

Low

1338530

DOCK8
Dedicator of cytokinesis protein 8

1

0

High-throughput

0.249

Low

1348258

TIP
T-cell immunomodulatory protein

1

0

High-throughput

0.249

Low

1364717

BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1

1

0

High-throughput

0.249

Low

1368685

KAT6A
Histone acetyltransferase KAT6A

1

0

High-throughput

0.249

Low

1383286

CLUA1
Clusterin-associated protein 1

1

0

High-throughput

0.249

Low

1386806

GCP3
Gamma-tubulin complex component 3

1

0

High-throughput

0.249

Low

1388662

SPDLY
Protein Spindly

1

0

High-throughput

0.249

Low

1393842

DDRGK
DDRGK domain-containing protein 1

1

0

High-throughput

0.249

Low

1430650

CCDC8
Coiled-coil domain-containing protein 8

1

0

High-throughput

0.249

Low

1451115

WDR70
WD repeat-containing protein 70

1

0

High-throughput

0.249

Low

1459374

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.249

Low

1461010

FBW1B
F-box/WD repeat-containing protein 11

1

0

High-throughput

0.249

Low

1461919

FZR1
Fizzy-related protein homolog

1

0

High-throughput

0.249

Low

1490871

MAFB
Transcription factor MafB

1

0

High-throughput

0.249

Low

1214225

LITD1
LINE-1 type transposase domain-containing protein 1

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025