Protein: VPS29
Vacuolar protein sorting-associated protein 29 (hVPS29) (PEP11 homolog) (Vesicle protein sorting 29)

Gene: VPS29
Organism: Homo sapiens
Interactions: 112
UniProt ID: Q9UBQ0

Gene Ontology (top 5):
GO:0005768 - endosome
GO:0005769 - early endosome
GO:0005770 - late endosome
GO:0005829 - cytosol
GO:0006886 - intracellular protein transport

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1400939

VPS35
Vacuolar protein sorting-associated protein 35

18

6

Small-scale

0.988

High

1365456

TBCD5
TBC1 domain family member 5

10

2

Small-scale

0.759

High

281794

VP26A
Vacuolar protein sorting-associated protein 26A

11

8

Small-scale

0.757

High

257191

CCD22
Coiled-coil domain-containing protein 22

6

1

High-throughput

0.734

High

1194122

VP26B
Vacuolar protein sorting-associated protein 26B

6

8

High-throughput

0.732

High

171114

VP26C
Vacuolar protein sorting-associated protein 26C

5

8

High-throughput

0.714

High

1201168

CCD93
Coiled-coil domain-containing protein 93

6

0

High-throughput

0.702

High

1399270

ANR27
Ankyrin repeat domain-containing protein 27

4

1

High-throughput

0.697

High

1277155

VP35L
VPS35 endosomal protein-sorting factor-like

5

0

High-throughput

0.696

High

1328854

COMD1
COMM domain-containing protein 1

5

0

High-throughput

0.684

High

1349638

DEN10
DENN domain-containing protein 10

5

0

High-throughput

0.684

High

1453656

COMD9
COMM domain-containing protein 9

5

0

High-throughput

0.684

High

1428331

COMD5
COMM domain-containing protein 5

4

0

High-throughput

0.667

High

1429669

COMD4
COMM domain-containing protein 4

4

0

High-throughput

0.667

High

1451661

COMD8
COMM domain-containing protein 8

4

0

High-throughput

0.667

High

901646

RAB7A
Ras-related protein Rab-7a

3

1

Small-scale

0.660

High

1458613

COMDA
COMM domain-containing protein 10

4

5

High-throughput

0.636

High

1458612

WAC2C
WASH complex subunit 2C

2

1

Small-scale

0.611

High

423381

A4
Amyloid-beta precursor protein

2

2

High-throughput

0.602

High

249678

SNX3
Sorting nexin-3

2

4

High-throughput

0.601

High

243186

PRKN
E3 ubiquitin-protein ligase parkin

2

1

High-throughput

0.601

High

833440

RGS2
Regulator of G-protein signaling 2

2

0

High-throughput

0.594

High

1085200

WASC5
WASH complex subunit 5

2

0

Small-scale

0.585

High

1211907

FKB15
FK506-binding protein 15

2

0

Small-scale

0.585

High

791798

SYUA
Alpha-synuclein

2

0

High-throughput

0.580

High

1108246

SQSTM
Sequestosome-1

2

0

Small-scale

0.575

High

1327806

SH2D3
SH2 domain-containing protein 3C

2

2

High-throughput

0.571

High

531167

KAP0
cAMP-dependent protein kinase type I-alpha regulatory subunit

2

0

High-throughput

0.547

High

866853

CAZA2
F-actin-capping protein subunit alpha-2

1

1

High-throughput

0.536

High

915208

CAZA1
F-actin-capping protein subunit alpha-1

1

1

High-throughput

0.536

High

1225389

WAC2A
WASH complex subunit 2A

1

1

High-throughput

0.536

High

86079

B9A6K1
TBC1 domain family member 5

1

2

High-throughput

0.515

High

156674

DC1I1
Cytoplasmic dynein 1 intermediate chain 1

1

1

High-throughput

0.515

High

1406389

M3K5
Mitogen-activated protein kinase kinase kinase 5

1

1

High-throughput

0.515

High

1417082

PINK1
Serine/threonine-protein kinase PINK1, mitochondrial

1

1

High-throughput

0.515

High

765964

BMI1
Polycomb complex protein BMI-1

1

0

High-throughput

0.513

High

867482

CAPZB
F-actin-capping protein subunit beta

1

0

High-throughput

0.513

High

908060

VAMP7
Vesicle-associated membrane protein 7

1

0

High-throughput

0.513

High

1178947

WASC4
WASH complex subunit 4

1

0

High-throughput

0.513

High

1277716

MYCPP
C-myc promoter-binding protein

1

0

High-throughput

0.513

High

1396847

SNX27
Sorting nexin-27

1

0

High-throughput

0.513

High

1400374

NEK1
Serine/threonine-protein kinase Nek1

1

0

High-throughput

0.513

High

1450631

ARL8B
ADP-ribosylation factor-like protein 8B

1

0

High-throughput

0.513

High

1453218

SPG21
Maspardin

1

0

High-throughput

0.513

High

1458608

ANR50
Ankyrin repeat domain-containing protein 50

1

0

High-throughput

0.513

High

440768

FYN
Tyrosine-protein kinase Fyn

1

0

High-throughput

0.493

High

533034

CH60
60 kDa heat shock protein, mitochondrial

1

0

High-throughput

0.493

High

605833

KAPCA
cAMP-dependent protein kinase catalytic subunit alpha

1

0

High-throughput

0.493

High

699881

P85A
Phosphatidylinositol 3-kinase regulatory subunit alpha

1

0

High-throughput

0.493

High

712899

CASP1
Caspase-1

1

0

High-throughput

0.493

High

877253

KC1D
Casein kinase I isoform delta

1

0

High-throughput

0.493

High

953155

ACTB
Actin, cytoplasmic 1

1

0

High-throughput

0.493

High

988791

RAC1
Ras-related C3 botulinum toxin substrate 1

1

0

High-throughput

0.493

High

1051979

KPCD
Protein kinase C delta type

1

0

High-throughput

0.493

High

1060928

LRP1
Prolow-density lipoprotein receptor-related protein 1

1

0

High-throughput

0.493

High

1118260

BLMH
Bleomycin hydrolase

1

0

High-throughput

0.493

High

1404913

PARK7
Parkinson disease protein 7

1

0

High-throughput

0.493

High

1405064

SORT
Sortilin

1

0

High-throughput

0.493

High

1458609

CHIP
E3 ubiquitin-protein ligase CHIP

1

0

High-throughput

0.493

High

1458610

KCC2A
Calcium/calmodulin-dependent protein kinase type II subunit alpha

1

0

High-throughput

0.493

High

1276356

ATG9A
Autophagy-related protein 9A

1

1

Small-scale

0.484

High

69415

WASH1
WASH complex subunit 1

1

1

High-throughput

0.479

High

170402

AURKA
Aurora kinase A

1

1

High-throughput

0.479

High

1104273

DC1I2
Cytoplasmic dynein 1 intermediate chain 2

1

1

High-throughput

0.479

High

1116093

DYR1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A

1

1

High-throughput

0.479

High

907333

APLP1
Amyloid beta precursor like protein 1

1

1

High-throughput

0.470

High

316110

RECQ4
ATP-dependent DNA helicase Q4

1

0

High-throughput

0.458

High

341694

EYA4
Protein phosphatase EYA4

1

0

High-throughput

0.458

High

447535

NPM
Nucleophosmin

1

0

High-throughput

0.458

High

458507

ADRB2
Beta-2 adrenergic receptor

1

0

Small-scale

0.458

High

789587

PPARG
Peroxisome proliferator-activated receptor gamma

1

0

Small-scale

0.458

High

904180

BAP31
B-cell receptor-associated protein 31

1

0

Small-scale

0.458

High

1335032

SERB1
SERPINE1 mRNA-binding protein 1

1

0

High-throughput

0.458

High

1364648

BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1

1

0

High-throughput

0.458

High

1371754

UBP7
Ubiquitin carboxyl-terminal hydrolase 7

1

0

Small-scale

0.458

High

1431333

ATG5
Autophagy protein 5

1

0

High-throughput

0.458

High

1458607

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.458

High

469451

ELNE
Neutrophil elastase

1

1

Small-scale

0.457

High

1446878

WASH6
WAS protein family homolog 6

1

1

High-throughput

0.445

High

696757

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

1

High-throughput

0.437

High

1051528

SRS11
Serine/arginine-rich splicing factor 11

1

1

High-throughput

0.437

High

1095065

DUS4
Dual specificity protein phosphatase 4

1

1

High-throughput

0.437

High

1098212

DUS8
Dual specificity protein phosphatase 8

1

1

High-throughput

0.437

High

325149

HEXI1
Protein HEXIM1

1

0

High-throughput

0.426

High

530505

TAU
Microtubule-associated protein tau

1

0

High-throughput

0.426

High

1214065

Q5T760
Serine and arginine rich splicing factor 11

1

1

High-throughput

0.407

High

1278369

COMD6
COMM domain-containing protein 6

5

0

High-throughput

0.372

High

1291798

COMD7
COMM domain-containing protein 7

5

0

High-throughput

0.372

High

1293512

COMD2
COMM domain-containing protein 2

4

0

High-throughput

0.363

High

1458421

COMD3
COMM domain-containing protein 3

4

0

High-throughput

0.358

High

756391

MCM7
DNA replication licensing factor MCM7

3

0

High-throughput

0.347

High

1216464

TMCO4
Transmembrane and coiled-coil domain-containing protein 4

2

0

High-throughput

0.316

High

1258755

F10C1
Protein FRA10AC1

1

0

High-throughput

0.282

High

892639

DNLI3
DNA ligase 3

1

0

High-throughput

0.279

Low

1198681

NCBP3
Nuclear cap-binding protein subunit 3

1

0

High-throughput

0.279

Low

1405996

C10
Protein C10

1

0

High-throughput

0.279

Low

1452069

GDAP2
Ganglioside-induced differentiation-associated protein 2

1

0

High-throughput

0.279

Low

1458611

WASC3
WASH complex subunit 3

1

0

High-throughput

0.279

Low

116880

I6L9F6
NEFL protein

1

0

High-throughput

0.268

Low

369516

AACT
Alpha-1-antichymotrypsin

1

0

High-throughput

0.268

Low

369765

A2MG
Alpha-2-macroglobulin

1

0

High-throughput

0.268

Low

641309

PGS1
Biglycan

1

0

High-throughput

0.268

Low

1150383

TGIF1
Homeobox protein TGIF1

1

0

High-throughput

0.268

Low

377764

INS
Insulin [Cleaved into: Insulin B chain; Insulin A chain]

1

0

High-throughput

0.249

Low

589935

RFA2
Replication protein A 32 kDa subunit

1

0

High-throughput

0.249

Low

769411

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.249

Low

937951

FOXA1
Hepatocyte nuclear factor 3-alpha

1

0

High-throughput

0.249

Low

1255932

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

231064

VEGFD
Vascular endothelial growth factor D

1

0

High-throughput

0.232

Low

1206691

LRC73
Leucine-rich repeat-containing protein 73

1

0

High-throughput

0.232

Low

1233726

TWF2
Twinfilin-2

1

0

High-throughput

0.232

Low

1333512

GOLM1
Golgi membrane protein 1

1

0

Small-scale

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025