Protein: SNF2
Transcription regulatory protein SNF2 (EC 3.6.4.-) (ATP-dependent helicase SNF2) (Regulatory protein GAM1) (Regulatory protein SWI2) (SWI/SNF complex component SNF2) (Transcription factor TYE3)

Gene: SNF2
Organism: Saccharomyces cerevisiae S288C
Interactions: 124
UniProt ID: P22082

Gene Ontology (top 5):
GO:0000182 - rDNA binding
GO:0000785 - chromatin
GO:0003677 - DNA binding
GO:0003682 - chromatin binding
GO:0004386 - helicase activity

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

643619

SWI3
SWI/SNF complex subunit SWI3

19

20

Small-scale

0.986

High

643679

ARP7
Actin-related protein 7

16

20

Small-scale

0.981

High

643665

ARP9
Actin-like protein ARP9

14

20

Small-scale

0.979

High

381871

H4
Histone H4

3

13

Small-scale

0.840

High

643659

H3
Histone H3

3

20

Small-scale

0.840

High

550025

RAP1
DNA-binding protein RAP1

2

2

Small-scale

0.799

High

614795

SNF5
SWI/SNF chromatin-remodeling complex subunit SNF5

19

20

Small-scale

0.763

High

483749

SWI1
SWI/SNF chromatin-remodeling complex subunit SWI1

15

1

Small-scale

0.759

High

643658

SNF12
Transcription regulatory protein SNF12

11

20

Small-scale

0.752

High

643625

TAF14
Transcription initiation factor TFIID subunit 14

11

3

Small-scale

0.750

High

643647

SWP82
SWI/SNF global transcription activator complex subunit SWP82

9

3

Small-scale

0.747

High

643657

RT102
Regulator of Ty1 transposition protein 102

8

2

Small-scale

0.745

High

617767

SNF6
Transcription regulatory protein SNF6

22

0

Small-scale

0.732

High

643637

SNF11
Transcription regulatory protein SNF11

7

0

Small-scale

0.713

High

419597

H2A2
Histone H2A.2

1

20

High-throughput

0.691

High

643620

STH1
Nuclear protein STH1/NPS1

1

18

High-throughput

0.691

High

643654

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

5

High-throughput

0.691

High

395225

GCN4
General control transcription factor GCN4

4

1

Small-scale

0.680

High

643648

RSC8
Chromatin structure-remodeling complex protein RSC8

1

20

Small-scale

0.656

High

380967

H2B1
Histone H2B.1

1

20

Small-scale

0.647

High

419356

H2A1
Histone H2A.1

1

20

Small-scale

0.647

High

643662

GCN5
Histone acetyltransferase GCN5

1

20

Small-scale

0.647

High

408391

GAL4
Regulatory protein GAL4

3

4

Small-scale

0.647

High

575889

CYPH
Peptidyl-prolyl cis-trans isomerase

2

3

High-throughput

0.621

High

643642

RIO2
Serine/threonine-protein kinase RIO2

2

6

High-throughput

0.621

High

643612

ASF1
Histone chaperone ASF1

1

11

Small-scale

0.618

High

643644

MPH1
ATP-dependent DNA helicase MPH1

1

18

High-throughput

0.618

High

643631

ANM1
Protein arginine N-methyltransferase 1

1

3

High-throughput

0.610

High

466775

SWI5
Transcriptional factor SWI5

2

11

Small-scale

0.602

High

643609

INO2
Protein INO2

2

1

Small-scale

0.602

High

643617

PUB1
Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1

2

12

High-throughput

0.588

High

569526

HAP4
Transcriptional activator HAP4

2

1

Small-scale

0.584

High

643645

DSN1
Kinetochore-associated protein DSN1

2

4

High-throughput

0.584

High

643672

ISW2
ISWI chromatin-remodeling complex ATPase ISW2

1

16

Small-scale

0.575

High

525928

HSP72
Heat shock protein SSA2

2

20

Small-scale

0.571

High

643676

RIO1
Serine/threonine-protein kinase RIO1

2

6

High-throughput

0.571

High

433449

RL26A
Large ribosomal subunit protein uL24A

2

7

High-throughput

0.558

High

643605

RS2
Small ribosomal subunit protein uS5

2

5

High-throughput

0.558

High

444829

SIR3
Regulatory protein SIR3

1

5

Small-scale

0.536

High

643633

ENP1
Essential nuclear protein 1

1

2

High-throughput

0.536

High

643681

RL11B
Large ribosomal subunit protein uL5B

1

6

High-throughput

0.536

High

642320

MCK1
Protein kinase MCK1

1

6

High-throughput

0.515

High

643613

HIR1
Protein HIR1

1

20

Small-scale

0.515

High

643614

HIR2
Protein HIR2

1

17

Small-scale

0.515

High

626469

AP1
AP-1-like transcription factor YAP1

1

0

High-throughput

0.513

High

643668

PBP4
Protein PBP4

1

0

High-throughput

0.513

High

643652

RFX1
RFX-like DNA-binding protein RFX1

1

7

Small-scale

0.501

High

643663

ARO80
Transcriptional activator ARO80

1

1

Small-scale

0.501

High

154135

RL36B
Large ribosomal subunit protein eL36B

1

3

High-throughput

0.489

High

434133

RL36A
Large ribosomal subunit protein eL36A

1

3

High-throughput

0.489

High

643607

RL16A
Large ribosomal subunit protein uL13A

1

1

High-throughput

0.489

High

643643

RL34B
Large ribosomal subunit protein eL34B

1

2

High-throughput

0.489

High

643651

RS12
Small ribosomal subunit protein eS12

1

4

High-throughput

0.489

High

643655

RL26B
Large ribosomal subunit protein uL24B

1

7

High-throughput

0.489

High

643660

RL34A
Large ribosomal subunit protein eL34A

1

2

High-throughput

0.489

High

643674

CHS5
Chitin biosynthesis protein CHS5

1

3

High-throughput

0.489

High

597036

BIP
Endoplasmic reticulum chaperone BiP

1

10

High-throughput

0.481

High

643611

SMY1
Kinesin-related protein SMY1

1

6

High-throughput

0.481

High

643623

TYE7
Transcription factor TYE7

1

1

High-throughput

0.481

High

643636

UBA4
Adenylyltransferase and sulfurtransferase UBA4

1

1

High-throughput

0.481

High

643646

GZF3
Protein GZF3

1

20

High-throughput

0.481

High

403355

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

13

High-throughput

0.479

High

434828

RS3
Small ribosomal subunit protein uS3

1

5

High-throughput

0.479

High

503355

RL11A
Large ribosomal subunit protein uL5A

1

6

High-throughput

0.479

High

643602

RFA1
Replication factor A protein 1

1

9

Small-scale

0.479

High

643606

MAS5
Mitochondrial protein import protein MAS5

1

9

Small-scale

0.479

High

643610

TF2B
Transcription initiation factor IIB

1

4

High-throughput

0.479

High

643615

PRP19
Pre-mRNA-processing factor 19

1

11

Small-scale

0.479

High

643621

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

11

High-throughput

0.479

High

643622

SMY2
Protein SMY2

1

2

High-throughput

0.479

High

643626

SPT10
Protein SPT10

1

4

High-throughput

0.479

High

643627

SPT21
Protein SPT21

1

3

High-throughput

0.479

High

643632

ATR
Serine/threonine-protein kinase MEC1

1

9

Small-scale

0.479

High

643634

RCK1
Serine/threonine-protein kinase RCK1

1

2

High-throughput

0.479

High

643641

SCC4
MAU2 chromatid cohesion factor homolog

1

4

Small-scale

0.479

High

643666

IWS1
Transcription factor SPN1

1

1

Small-scale

0.479

High

643670

MED7
Mediator of RNA polymerase II transcription subunit 7

1

1

Small-scale

0.479

High

643671

RS10A
Small ribosomal subunit protein eS10A

1

6

High-throughput

0.479

High

643673

NCBP2
Nuclear cap-binding protein subunit 2

1

12

High-throughput

0.479

High

643675

SCC1
Sister chromatid cohesion protein 1

1

7

High-throughput

0.479

High

643677

RLM1
Transcription factor RLM1

1

12

Small-scale

0.479

High

643678

SMT3
Ubiquitin-like protein SMT3

1

11

High-throughput

0.479

High

624865

MED15
Mediator of RNA polymerase II transcription subunit 15

1

0

Small-scale

0.460

High

643667

HDA2
HDA1 complex subunit 2

1

0

High-throughput

0.460

High

643616

MED17
Mediator of RNA polymerase II transcription subunit 17

1

0

Small-scale

0.458

High

643664

LCD1
DNA damage checkpoint protein LCD1

1

0

Small-scale

0.458

High

643650

BBC1
Myosin tail region-interacting protein MTI1

1

9

High-throughput

0.457

High

448134

HAP2
Transcriptional activator HAP2

1

5

High-throughput

0.445

High

523064

HSP71
Heat shock protein SSA1

1

20

High-throughput

0.445

High

543822

SSB1
Ribosome-associated molecular chaperone SSB1

1

20

High-throughput

0.445

High

643601

AFT1
Iron-regulated transcriptional activator AFT1

1

2

High-throughput

0.445

High

643603

SIS1
Protein SIS1

1

6

High-throughput

0.445

High

643618

HSP7F
Heat shock protein homolog SSE1

1

20

High-throughput

0.445

High

643680

CAF1A
Chromatin assembly factor 1 subunit A

1

15

High-throughput

0.445

High

643640

TSC11
Target of rapamycin complex 2 subunit TSC11

1

3

High-throughput

0.439

High

149584

RS9A
Small ribosomal subunit protein uS4A

1

4

High-throughput

0.437

High

383519

RS17A
Small ribosomal subunit protein eS17A

1

4

High-throughput

0.437

High

409937

RL25
Large ribosomal subunit protein uL23

1

4

High-throughput

0.437

High

435775

RS13
Small ribosomal subunit protein uS15

1

3

High-throughput

0.437

High

441706

RS14A
Small ribosomal subunit protein uS11A

1

3

High-throughput

0.437

High

454878

RS19A
Small ribosomal subunit protein eS19A

1

6

High-throughput

0.437

High

502850

RS22A
Small ribosomal subunit protein uS8A

1

4

High-throughput

0.437

High

504040

RL31A
Large ribosomal subunit protein eL31A

1

4

High-throughput

0.437

High

512258

RS6A
Small ribosomal subunit protein eS6A

1

4

High-throughput

0.437

High

512821

RS8A
Small ribosomal subunit protein eS8A

1

4

High-throughput

0.437

High

514458

RS18A
Small ribosomal subunit protein uS13A

1

4

High-throughput

0.437

High

514980

YM14A
Transposon Ty1-MR2 Gag polyprotein

1

1

High-throughput

0.437

High

515208

RL35A
Large ribosomal subunit protein uL29A

1

3

High-throughput

0.437

High

643608

RS7A
Small ribosomal subunit protein eS7A

1

2

High-throughput

0.437

High

643624

RS3A1
Small ribosomal subunit protein eS1A

1

5

High-throughput

0.437

High

643628

RS27A
Small ribosomal subunit protein eS27A

1

4

High-throughput

0.437

High

643635

RS20
Small ribosomal subunit protein uS10

1

4

High-throughput

0.437

High

643639

LAA1
AP-1 accessory protein LAA1

1

2

High-throughput

0.437

High

643661

RS15
Small ribosomal subunit protein uS19

1

4

High-throughput

0.437

High

643638

STM1
Suppressor protein STM1

1

0

High-throughput

0.426

High

643656

PBP1
PAB1-binding protein 1

1

0

High-throughput

0.426

High

427027

FUR4
Uracil permease

1

1

High-throughput

0.407

High

643629

CAB3
Coenzyme A biosynthesis protein 3

1

1

High-throughput

0.407

High

643653

RL37B
Large ribosomal subunit protein eL37B

1

1

High-throughput

0.407

High

643630

RM16
Large ribosomal subunit protein uL16m

2

0

High-throughput

0.307

High

506501

YL016
Putative truncated guanine nucleotide exchange factor SDC25

1

0

High-throughput

0.261

Low

643604

STE50
Protein STE50

1

0

High-throughput

0.251

Low

643649

STB2
Protein STB2

1

0

High-throughput

0.251

Low

643669

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low


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Last updated: 11Aug2025