HitPredict - High confidence protein-protein interactions

Protein: RRP40
Exosome complex component rrp40 (Ribosomal RNA-processing protein 40)

Gene: RRP40
Organism: Schizosaccharomyces pombe 972h-
Interactions: 6
UniProt ID: O13903

Gene Ontology (top 5):
GO:0000176 - nuclear exosome (RNase complex)
GO:0000177 - cytoplasmic exosome (RNase complex)
GO:0000178 - exosome (RNase complex)
GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003723 - RNA binding

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
143505	DIS3 Exosome complex exonuclease dis3	3	4	Small-scale	0.640	High
143507	RRP4 Exosome complex component rrp4	1	5	High-throughput	0.618	High
143508	RRP43 Exosome complex component rrp43	1	11	Small-scale	0.618	High
143509	RED1 NURS complex subunit red1	1	0	High-throughput	0.458	High
143506	PANB Probable 3-methyl-2-oxobutanoate hydroxymethyltransferase	1	0	High-throughput	0.251	Low
143504	PIR2 NURS complex subunit pir2	1	0	High-throughput	0.249	Low

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Last updated: 15 Jul 2024