Protein: ARP9
Actin-like protein ARP9 (Chromatin structure-remodeling complex protein ARP9) (SWI/SNF complex component ARP9)

Gene: ARP9
Organism: Saccharomyces cerevisiae S288C
Interactions: 121
UniProt ID: Q05123

Gene Ontology (top 5):
GO:0000785 - chromatin
GO:0005198 - structural molecule activity
GO:0005634 - nucleus
GO:0006325 - chromatin organization
GO:0006337 - nucleosome disassembly

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

643665

SNF2
Transcription regulatory protein SNF2

14

20

Small-scale

0.979

High

743139

STH1
Nuclear protein STH1/NPS1

10

20

Small-scale

0.975

High

1050605

ARP7
Actin-related protein 7

7

19

Small-scale

0.967

High

919691

RT102
Regulator of Ty1 transposition protein 102

9

0

Small-scale

0.923

High

1050597

RSC2
Chromatin structure-remodeling complex subunit RSC2

14

20

Small-scale

0.759

High

745615

RSC7
Chromatin structure-remodeling complex subunit RSC7

7

1

Small-scale

0.748

High

743054

SWI3
SWI/SNF complex subunit SWI3

7

19

Small-scale

0.745

High

918526

RSC1
Chromatin structure-remodeling complex subunit RSC1

7

20

Small-scale

0.741

High

1035328

RSC4
Chromatin structure-remodeling complex subunit RSC4

6

20

High-throughput

0.730

High

1050600

RSC58
Chromatin structure-remodeling complex protein RSC58

6

1

High-throughput

0.729

High

850576

RSC8
Chromatin structure-remodeling complex protein RSC8

5

18

High-throughput

0.718

High

1050599

RSC3
Chromatin structure-remodeling complex protein RSC3

5

1

High-throughput

0.718

High

617817

SNF6
Transcription regulatory protein SNF6

9

0

Small-scale

0.718

High

614849

SNF5
SWI/SNF chromatin-remodeling complex subunit SNF5

5

20

Small-scale

0.716

High

678344

RSC6
Chromatin structure-remodeling complex protein RSC6

5

18

High-throughput

0.716

High

763374

TAF14
Transcription initiation factor TFIID subunit 14

5

9

Small-scale

0.709

High

764004

SPT10
Protein SPT10

2

0

High-throughput

0.699

High

793998

TAF5
SAGA complex/transcription factor TFIID complex subunit TAF5

1

11

High-throughput

0.691

High

1042373

GCN5
Histone acetyltransferase GCN5

1

17

High-throughput

0.691

High

1050595

SFH1
Chromatin structure-remodeling complex subunit SFH1

4

8

Small-scale

0.691

High

483807

SWI1
SWI/SNF chromatin-remodeling complex subunit SWI1

5

0

Small-scale

0.684

High

382343

H4
Histone H4

4

5

Small-scale

0.676

High

1040999

RSC9
Chromatin structure-remodeling complex subunit RSC9

4

0

Small-scale

0.658

High

849628

SWP82
SWI/SNF global transcription activator complex subunit SWP82

3

1

Small-scale

0.656

High

963717

H3
Histone H3

3

8

Small-scale

0.641

High

823039

ATAD2
ATPase histone chaperone YTA7

3

8

High-throughput

0.633

High

734477

BTAF1
TATA-binding protein-associated factor MOT1

1

20

Small-scale

0.618

High

744345

CHD1
Chromo domain-containing protein 1

1

17

High-throughput

0.618

High

792245

GBLP
Small ribosomal subunit protein RACK1

1

13

High-throughput

0.618

High

1044459

RUVB1
RuvB-like protein 1

1

17

High-throughput

0.618

High

1050607

CMR1
DNA damage-binding protein CMR1

1

10

High-throughput

0.618

High

796036

LDB7
Chromatin structure-remodeling complex protein RSC14

2

0

Small-scale

0.585

High

594568

RPB3
DNA-directed RNA polymerase II subunit RPB3

2

3

High-throughput

0.584

High

826833

DSN1
Kinetochore-associated protein DSN1

2

1

High-throughput

0.584

High

1050610

HTL1
High temperature lethal protein 1

2

0

High-throughput

0.576

High

1050593

SWR1
Helicase SWR1

1

20

High-throughput

0.575

High

381265

H2B1
Histone H2B.1

2

12

High-throughput

0.571

High

419875

H2A2
Histone H2A.2

2

6

High-throughput

0.571

High

1046929

POB3
FACT complex subunit POB3

2

2

High-throughput

0.571

High

808230

SNF11
Transcription regulatory protein SNF11

2

0

Small-scale

0.559

High

525146

HSP71
Heat shock protein SSA1

2

5

High-throughput

0.552

High

754187

MSN2
Zinc finger protein MSN2

2

7

High-throughput

0.552

High

722257

XPO1
Exportin-1

1

5

High-throughput

0.536

High

922148

SNF12
Transcription regulatory protein SNF12

1

18

High-throughput

0.536

High

1050598

CFT1
Protein CFT1

1

2

High-throughput

0.515

High

794762

RTG3
Retrograde regulation protein 3

1

0

High-throughput

0.513

High

917867

SGF73
SAGA complex subunit SGF73

1

0

High-throughput

0.513

High

932232

ORC1
Origin recognition complex subunit 1

1

7

Small-scale

0.501

High

917480

PRP43
Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43

1

3

High-throughput

0.489

High

381636

H2B2
Histone H2B.2

1

12

High-throughput

0.479

High

435361

RS3
Small ribosomal subunit protein uS3

1

1

High-throughput

0.479

High

449007

TOP2
DNA topoisomerase 2

1

1

High-throughput

0.479

High

647224

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

1

High-throughput

0.479

High

671125

SIS1
Protein SIS1

1

4

High-throughput

0.479

High

708180

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

735160

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

1

High-throughput

0.479

High

739773

SPT16
FACT complex subunit SPT16

1

2

High-throughput

0.479

High

745875

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

4

High-throughput

0.479

High

748045

SMY2
Protein SMY2

1

1

High-throughput

0.479

High

777118

BDF1
Bromodomain-containing factor 1

1

20

High-throughput

0.479

High

801022

RFC1
Replication factor C subunit 1

1

2

High-throughput

0.479

High

804004

RSC30
Chromatin structure-remodeling complex protein RSC30

1

1

High-throughput

0.479

High

826402

MPH1
ATP-dependent DNA helicase MPH1

1

7

High-throughput

0.479

High

897508

UBC9
SUMO-conjugating enzyme UBC9

1

3

High-throughput

0.479

High

922652

HST2
NAD-dependent protein deacetylase HST2

1

2

High-throughput

0.479

High

925053

APJ1
J domain-containing protein APJ1

1

3

High-throughput

0.479

High

1045166

SIZ1
E3 SUMO-protein ligase SIZ1

1

3

High-throughput

0.479

High

1050602

SGO1
Shugoshin

1

1

High-throughput

0.479

High

1050609

SMC6
Structural maintenance of chromosomes protein 6

1

15

High-throughput

0.479

High

624942

MED15
Mediator of RNA polymerase II transcription subunit 15

1

0

Small-scale

0.460

High

740432

MED17
Mediator of RNA polymerase II transcription subunit 17

1

0

Small-scale

0.458

High

1044746

SCC2
Sister chromatid cohesion protein 2

1

0

High-throughput

0.458

High

1050594

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.458

High

1050596

TFC6
Transcription factor tau 91 kDa subunit

1

0

High-throughput

0.458

High

1050601

MED7
Mediator of RNA polymerase II transcription subunit 7

1

0

Small-scale

0.458

High

1050604

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

444876

SIR3
Regulatory protein SIR3

1

3

Small-scale

0.457

High

448223

HAP2
Transcriptional activator HAP2

1

1

High-throughput

0.445

High

489002

SWI6
Regulatory protein SWI6

1

20

High-throughput

0.445

High

527672

HSP72
Heat shock protein SSA2

1

5

High-throughput

0.445

High

547827

NHP6A
Non-histone chromosomal protein 6A

1

8

High-throughput

0.445

High

548801

MCM1
Pheromone receptor transcription factor

1

2

High-throughput

0.445

High

645644

AFT1
Iron-regulated transcriptional activator AFT1

1

1

High-throughput

0.445

High

650019

SIN3
Transcriptional regulatory protein SIN3

1

3

High-throughput

0.445

High

671559

SWI4
Regulatory protein SWI4

1

20

High-throughput

0.445

High

713305

MCM5
Minichromosome maintenance protein 5

1

8

High-throughput

0.445

High

736730

ASF1
Histone chaperone ASF1

1

1

High-throughput

0.445

High

737653

HIR1
Protein HIR1

1

7

High-throughput

0.445

High

738778

CBF3A
Centromere DNA-binding protein complex CBF3 subunit A

1

1

High-throughput

0.445

High

752990

IXR1
Intrastrand cross-link recognition protein

1

11

High-throughput

0.445

High

754247

MSN4
Zinc finger protein MSN4

1

6

High-throughput

0.445

High

781803

SET3
SET domain-containing protein 3

1

2

High-throughput

0.445

High

819792

SSB2
Ribosome-associated molecular chaperone SSB2

1

5

High-throughput

0.445

High

820443

RT106
Histone chaperone RTT106

1

1

High-throughput

0.445

High

858474

TAF1
Transcription initiation factor TFIID subunit 1

1

1

High-throughput

0.445

High

1040027

HOS3
Histone deacetylase HOS3

1

8

High-throughput

0.445

High

1048413

RCO1
Transcriptional regulatory protein RCO1

1

10

High-throughput

0.445

High

1050606

CAF1A
Chromatin assembly factor 1 subunit A

1

7

High-throughput

0.445

High

1050608

H2AZ
Histone H2A.Z

1

12

High-throughput

0.445

High

149956

RS9A
Small ribosomal subunit protein uS4A

1

2

High-throughput

0.437

High

433849

RL26A
Large ribosomal subunit protein uL24A

1

2

High-throughput

0.437

High

436175

RS13
Small ribosomal subunit protein uS15

1

2

High-throughput

0.437

High

442114

RS14A
Small ribosomal subunit protein uS11A

1

1

High-throughput

0.437

High

455262

RS19A
Small ribosomal subunit protein eS19A

1

1

High-throughput

0.437

High

512652

RS6A
Small ribosomal subunit protein eS6A

1

1

High-throughput

0.437

High

513218

RS8A
Small ribosomal subunit protein eS8A

1

1

High-throughput

0.437

High

678069

FEN2
Pantothenate transporter FEN2

1

1

High-throughput

0.437

High

689660

RS7A
Small ribosomal subunit protein eS7A

1

4

High-throughput

0.437

High

747579

RSSA1
Small ribosomal subunit protein uS2A

1

3

High-throughput

0.437

High

753587

RS3A1
Small ribosomal subunit protein eS1A

1

2

High-throughput

0.437

High

778533

RS27A
Small ribosomal subunit protein eS27A

1

2

High-throughput

0.437

High

812653

LAA1
AP-1 accessory protein LAA1

1

1

High-throughput

0.437

High

815236

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

1

High-throughput

0.437

High

874529

RS12
Small ribosomal subunit protein eS12

1

3

High-throughput

0.437

High

1033566

RS15
Small ribosomal subunit protein uS19

1

1

High-throughput

0.437

High

1050603

RS10A
Small ribosomal subunit protein eS10A

1

9

High-throughput

0.437

High

743611

RTG1
Retrograde regulation protein 1

1

0

High-throughput

0.426

High

394907

EF1A
Elongation factor 1-alpha

1

5

High-throughput

0.407

High

836894

MPG1
Mannose-1-phosphate guanyltransferase

1

1

High-throughput

0.407

High

581934

CATA
Peroxisomal catalase A

1

0

High-throughput

0.265

Low

795214

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low


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Last updated: 11Aug2025