Protein: RL11B
Large ribosomal subunit protein uL5B (60S ribosomal protein L11-B) (L16) (RP39) (YL22)

Gene: RL11B, RPL11B
Organism: Saccharomyces cerevisiae S288C
Interactions: 126
UniProt ID: Q3E757

Gene Ontology (top 5):
GO:0000027 - ribosomal large subunit assembly
GO:0002181 - cytoplasmic translation
GO:0003723 - RNA binding
GO:0003735 - structural constituent of ribosome
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

782509

RPF2
Ribosome biogenesis protein RPF2

3

2

Small-scale

0.675

High

503456

RL11A
Large ribosomal subunit protein uL5A

1

1

High-throughput

0.618

High

513602

RL1A
Large ribosomal subunit protein uL1A

1

3

High-throughput

0.618

High

684899

RL5
Large ribosomal subunit protein uL18

1

2

High-throughput

0.618

High

1064865

RRS1
Regulator of ribosome biosynthesis

3

2

Small-scale

0.614

High

513803

RL2A
Large ribosomal subunit protein uL2A

2

3

High-throughput

0.584

High

826978

DSN1
Kinetochore-associated protein DSN1

2

1

High-throughput

0.584

High

850290

RPN11
Ubiquitin carboxyl-terminal hydrolase RPN11

2

3

High-throughput

0.584

High

864207

ALB1
Ribosome biogenesis protein ALB1

2

1

Small-scale

0.584

High

1044246

ARX1
Probable metalloprotease ARX1

2

3

Small-scale

0.584

High

1065627

NEW1
[NU+] prion formation protein 1

1

1

Small-scale

0.575

High

1084251

NOP53
Ribosome biogenesis protein NOP53

2

2

Small-scale

0.571

High

454505

PHO4
Phosphate system positive regulatory protein PHO4

1

1

High-throughput

0.536

High

633524

PP11
Serine/threonine-protein phosphatase PP1-1

1

2

High-throughput

0.536

High

643681

SNF2
Transcription regulatory protein SNF2

1

6

High-throughput

0.536

High

722393

XPO1
Exportin-1

1

1

High-throughput

0.536

High

737796

IF2G
Eukaryotic translation initiation factor 2 subunit gamma

1

5

High-throughput

0.536

High

830225

NOP2
25S rRNA

1

3

High-throughput

0.536

High

923169

BRE5
UBP3-associated protein BRE5

1

4

High-throughput

0.536

High

1030626

UBP3
Ubiquitin carboxyl-terminal hydrolase 3

1

1

High-throughput

0.536

High

1084545

MAK21
Ribosome biogenesis protein MAK21

1

4

High-throughput

0.536

High

558914

CAF20
Cap-associated protein CAF20

2

1

High-throughput

0.533

High

678494

PWP2
Periodic tryptophan protein 2

1

3

High-throughput

0.489

High

154245

RL36B
Large ribosomal subunit protein eL36B

1

2

High-throughput

0.479

High

364836

CDK1
Cyclin-dependent kinase 1

1

1

High-throughput

0.479

High

383215

RLA4
Large ribosomal subunit protein P2B

1

3

High-throughput

0.479

High

410419

RL25
Large ribosomal subunit protein uL23

1

3

High-throughput

0.479

High

415064

RL39
Large ribosomal subunit protein eL39

1

3

High-throughput

0.479

High

427499

RLA0
Large ribosomal subunit protein uL10

1

1

High-throughput

0.479

High

427769

RLA2
Large ribosomal subunit protein P2A

1

3

High-throughput

0.479

High

432750

RL7A
Large ribosomal subunit protein uL30A

1

6

High-throughput

0.479

High

432939

RL9A
Large ribosomal subunit protein uL6A

1

2

High-throughput

0.479

High

433095

RL6B
Large ribosomal subunit protein eL6B

1

4

High-throughput

0.479

High

433324

RL17A
Large ribosomal subunit protein uL22A

1

2

High-throughput

0.479

High

434107

RL33A
Large ribosomal subunit protein eL33A

1

1

High-throughput

0.479

High

434471

RL15A
Large ribosomal subunit protein eL15A

1

1

High-throughput

0.479

High

434672

RL22A
Large ribosomal subunit protein eL22A

1

4

High-throughput

0.479

High

503872

RL27A
Large ribosomal subunit protein eL27A

1

2

High-throughput

0.479

High

511325

RL20B
Large ribosomal subunit protein eL20B

1

2

High-throughput

0.479

High

511513

RL43B
Large ribosomal subunit protein eL43B

1

2

High-throughput

0.479

High

511976

RS30A
Small ribosomal subunit protein eS30A

1

1

High-throughput

0.479

High

514084

RL18B
Large ribosomal subunit protein eL18B

1

2

High-throughput

0.479

High

514391

RL12B
Large ribosomal subunit protein uL11B

1

2

High-throughput

0.479

High

515195

RL19B
Large ribosomal subunit protein eL19

1

3

High-throughput

0.479

High

515352

RL35A
Large ribosomal subunit protein uL29A

1

2

High-throughput

0.479

High

528887

RLA3
Large ribosomal subunit protein P1B

1

3

High-throughput

0.479

High

531947

RL4A
Large ribosomal subunit protein uL4A

1

2

High-throughput

0.479

High

569889

RL30
Large ribosomal subunit protein eL30

1

1

High-throughput

0.479

High

570201

RL3
Large ribosomal subunit protein uL3

1

2

High-throughput

0.479

High

637311

PWP1
Periodic tryptophan protein 1

1

4

High-throughput

0.479

High

663741

RL24B
Large ribosomal subunit protein eL24B

1

4

High-throughput

0.479

High

671288

SIS1
Protein SIS1

1

3

High-throughput

0.479

High

677644

KRR1
KRR1 small subunit processome component

1

2

High-throughput

0.479

High

680202

CDC48
Cell division control protein 48

1

2

High-throughput

0.479

High

682439

SPB4
ATP-dependent rRNA helicase SPB4

1

6

High-throughput

0.479

High

689176

RL16A
Large ribosomal subunit protein uL13A

1

4

High-throughput

0.479

High

689302

RL16B
Large ribosomal subunit protein uL13B

1

4

High-throughput

0.479

High

708653

TF2B
Transcription initiation factor IIB

1

1

High-throughput

0.479

High

712709

RL8B
Large ribosomal subunit protein eL8B

1

3

High-throughput

0.479

High

744368

CHD1
Chromo domain-containing protein 1

1

4

High-throughput

0.479

High

750810

PRS6A
26S proteasome regulatory subunit 6A

1

2

High-throughput

0.479

High

781288

RL14A
Large ribosomal subunit protein eL14A

1

3

High-throughput

0.479

High

792595

RL32
Large ribosomal subunit protein eL32

1

1

High-throughput

0.479

High

806191

NMD3
60S ribosomal export protein NMD3

1

1

High-throughput

0.479

High

820988

RL13B
Large ribosomal subunit protein eL13B

1

3

High-throughput

0.479

High

825926

RL34B
Large ribosomal subunit protein eL34B

1

4

High-throughput

0.479

High

827655

RLP7
Ribosome biogenesis protein RLP7

1

6

High-throughput

0.479

High

835924

RL10
Large ribosomal subunit protein uL16

1

1

High-throughput

0.479

High

863903

RL17B
Large ribosomal subunit protein uL22B

1

2

High-throughput

0.479

High

865814

MOG1
Nuclear import protein MOG1

1

1

High-throughput

0.479

High

879862

RL37A
Large ribosomal subunit protein eL37A

1

2

High-throughput

0.479

High

917714

LSG1
Large subunit GTPase 1

1

7

High-throughput

0.479

High

918355

RL26B
Large ribosomal subunit protein uL24B

1

5

High-throughput

0.479

High

919063

PESC
Pescadillo homolog

1

1

Small-scale

0.479

High

919573

SDA1
Protein SDA1

1

1

High-throughput

0.479

High

923235

NOG2
Nucleolar GTP-binding protein 2

1

7

High-throughput

0.479

High

924088

JJJ1
J protein JJJ1

1

2

High-throughput

0.479

High

1018171

RL34A
Large ribosomal subunit protein eL34A

1

4

High-throughput

0.479

High

1036971

ABF2
ARS-binding factor 2, mitochondrial

1

5

High-throughput

0.479

High

1038421

RL21A
Large ribosomal subunit protein eL21A

1

3

High-throughput

0.479

High

1043326

HAS1
ATP-dependent RNA helicase HAS1

1

8

High-throughput

0.479

High

1044615

HMO1
High mobility group protein 1

1

5

High-throughput

0.479

High

1045097

SXM1
Importin beta SMX1

1

2

Small-scale

0.479

High

1046338

VMS1
tRNA endonuclease VMS1

1

1

High-throughput

0.479

High

1061414

BUD20
Bud site selection protein 20

1

1

Small-scale

0.479

High

1084084

TMA46
Translation machinery-associated protein 46

1

2

High-throughput

0.479

High

1084502

YRA1
RNA annealing protein YRA1

1

3

High-throughput

0.479

High

482111

C1TM
C-1-tetrahydrofolate synthase, mitochondrial

1

0

High-throughput

0.458

High

666576

DBP2
ATP-dependent RNA helicase DBP2

1

0

High-throughput

0.458

High

734837

SRP21
Signal recognition particle subunit SRP21

1

0

High-throughput

0.458

High

735247

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

803733

RPN1
26S proteasome regulatory subunit RPN1

1

0

High-throughput

0.458

High

806849

RPN10
26S proteasome regulatory subunit RPN10

1

0

High-throughput

0.458

High

809452

STM1
Suppressor protein STM1

1

0

High-throughput

0.458

High

814067

IF2P
Eukaryotic translation initiation factor 5B

1

0

High-throughput

0.458

High

879910

RL38
Large ribosomal subunit protein eL38

1

0

High-throughput

0.458

High

916872

DXO
Decapping nuclease RAI1

1

0

High-throughput

0.458

High

921185

H1
Histone H1

1

0

High-throughput

0.458

High

1044279

FIN1
Filament protein FIN1

1

0

Small-scale

0.458

High

1059625

NOP6
Nucleolar protein 6

1

0

High-throughput

0.458

High

1064314

SGO1
Shugoshin

1

0

High-throughput

0.458

High

509782

UBI4P
Polyubiquitin [Cleaved into: Ubiquitin]

1

5

High-throughput

0.445

High

820232

SSB2
Ribosome-associated molecular chaperone SSB2

1

4

High-throughput

0.445

High

1050223

RRP5
rRNA biogenesis protein RRP5

1

2

Small-scale

0.445

High

739838

SPT16
FACT complex subunit SPT16

1

1

High-throughput

0.437

High

790306

GLYM
Serine hydroxymethyltransferase, mitochondrial

1

1

High-throughput

0.437

High

798705

YB8A
Putative uncharacterized protein YBR285W

1

1

Small-scale

0.437

High

812146

DHH1
ATP-dependent RNA helicase DHH1

1

3

High-throughput

0.437

High

918510

EIF2A
Eukaryotic translation initiation factor 2A

1

2

High-throughput

0.437

High

922700

PPID
Peptidyl-prolyl cis-trans isomerase CPR6

1

2

Small-scale

0.437

High

923904

GIS2
Zinc finger protein GIS2

1

4

High-throughput

0.437

High

1059452

VAM6
Vacuolar morphogenesis protein 6

1

2

High-throughput

0.437

High

1085038

RQC2
Ribosome quality control complex subunit 2

1

1

High-throughput

0.437

High

790527

CCL1
Cyclin CCL1

1

0

High-throughput

0.426

High

807940

BFR1
Nuclear segregation protein BFR1

1

0

High-throughput

0.426

High

918055

CGR1
rRNA-processing protein CGR1

1

0

High-throughput

0.426

High

1035232

UBC7
Ubiquitin-conjugating enzyme E2 7

1

1

High-throughput

0.417

High

813622

ERP2
Protein ERP2

1

0

High-throughput

0.279

Low

567711

ACOX
Acyl-coenzyme A oxidase

1

0

High-throughput

0.249

Low

746983

TIM23
Mitochondrial import inner membrane translocase subunit TIM23

1

0

High-throughput

0.249

Low

780078

EAP1
Protein EAP1

1

0

High-throughput

0.249

Low

844682

UTP10
U3 small nucleolar RNA-associated protein 10

1

0

High-throughput

0.249

Low

877952

VATG
V-type proton ATPase subunit G

1

0

High-throughput

0.249

Low

918745

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

0

High-throughput

0.249

Low

925412

SAM50
Sorting assembly machinery 50 kDa subunit

1

0

High-throughput

0.249

Low

1065553

AP3D
AP-3 complex subunit delta

1

0

High-throughput

0.249

Low


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Last updated: 11Aug2025