HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
670368	NAP1 Nucleosome assembly protein	15	19	Small-scale	0.981	High
381330	H2B1 Histone H2B.1	12	20	Small-scale	0.977	High
1051144	SWR1 Helicase SWR1	11	20	Small-scale	0.975	High
963819	H3 Histone H3	11	20	Small-scale	0.972	High
1042552	VPS72 Vacuolar protein sorting-associated protein 72	9	7	Small-scale	0.972	High
382435	H4 Histone H4	10	17	Small-scale	0.969	High
381682	H2B2 Histone H2B.2	10	20	Small-scale	0.967	High
419536	H2A1 Histone H2A.1	6	19	Small-scale	0.950	High
419924	H2A2 Histone H2A.2	7	19	Small-scale	0.946	High
916905	IMB5 Importin subunit beta-5	6	10	Small-scale	0.938	High
817201	CHZ1 Histone H2A.Z-specific chaperone CHZ1	9	0	Small-scale	0.910	High
921183	H1 Histone H1	4	1	Small-scale	0.885	High
1085042	H2AZ Histone H2A.Z	3	19	Small-scale	0.871	High
739837	SPT16 FACT complex subunit SPT16	3	8	Small-scale	0.853	High
794247	ISW1 ISWI chromatin-remodeling complex ATPase ISW1	3	20	High-throughput	0.817	High
925469	HDA1 Histone deacetylase HDA1	2	14	Small-scale	0.806	High
1064662	ESA1 Histone acetyltransferase ESA1	2	20	Small-scale	0.755	High
757783	SAS3 Histone acetyltransferase SAS3	2	18	Small-scale	0.754	High
792329	GBLP Small ribosomal subunit protein RACK1	2	7	High-throughput	0.754	High
1010227	ARP4 Actin-related protein 4	8	17	Small-scale	0.746	High
1044527	RUVB1 RuvB-like protein 1	8	13	Small-scale	0.746	High
725989	SWC3 SWR1-complex protein 3	7	1	Small-scale	0.742	High
918188	SWC4 SWR1-complex protein 4	7	3	Small-scale	0.742	High
1084961	RUVB2 RuvB-like protein 2	7	13	Small-scale	0.742	High
736763	ASF1 Histone chaperone ASF1	2	1	Small-scale	0.737	High
743158	STH1 Nuclear protein STH1/NPS1	2	20	High-throughput	0.737	High
744367	CHD1 Chromo domain-containing protein 1	2	20	High-throughput	0.737	High
817997	IMB4 Importin subunit beta-4	2	9	Small-scale	0.737	High
1040037	HOS3 Histone deacetylase HOS3	2	18	High-throughput	0.737	High
1046972	POB3 FACT complex subunit POB3	2	11	High-throughput	0.737	High
777148	BDF1 Bromodomain-containing factor 1	6	20	Small-scale	0.727	High
924916	AF9 Protein AF-9 homolog	5	7	Small-scale	0.714	High
948707	ACT Actin	5	8	Small-scale	0.712	High
1085006	ARP6 Actin-like protein ARP6	5	11	Small-scale	0.706	High
1042805	VPS71 Vacuolar protein sorting-associated protein 71	6	0	Small-scale	0.699	High
724895	RAD16 DNA repair protein RAD16	1	19	High-throughput	0.691	High
798134	SWC5 SWR1-complex protein 5	4	7	Small-scale	0.691	High
1056586	SWC7 SWR1-complex protein 7	3	1	Small-scale	0.656	High
739930	RPD3 Histone deacetylase RPD3	1	15	Small-scale	0.647	High
1042417	GCN5 Histone acetyltransferase GCN5	3	20	Small-scale	0.641	High
823069	ATAD2 ATPase histone chaperone YTA7	3	6	High-throughput	0.633	High
919706	RT102 Regulator of Ty1 transposition protein 102	3	2	Small-scale	0.633	High
1084230	IOC2 ISWI one complex protein 2	3	1	High-throughput	0.633	High
781293	BYE1 Transcription factor BYE1	1	2	High-throughput	0.618	High
818600	NCB1 Negative cofactor 2 complex subunit alpha	1	1	Small-scale	0.618	High
932266	ORC1 Origin recognition complex subunit 1	1	10	High-throughput	0.618	High
1047311	ERB1 Ribosome biogenesis protein ERB1	1	6	High-throughput	0.618	High
1054046	SFH1 Chromatin structure-remodeling complex subunit SFH1	1	5	High-throughput	0.618	High
1055693	IRC20 Uncharacterized ATP-dependent helicase IRC20	1	20	High-throughput	0.618	High
1085011	CMR1 DNA damage-binding protein CMR1	1	13	High-throughput	0.618	High
805243	TRA1 SAGA complex/NuA4 acetyltransferase complex subunit TRA1	2	8	Small-scale	0.601	High
849817	EPL1 Enhancer of polycomb-like protein 1	2	4	Small-scale	0.601	High
1055173	CORO Coronin-like protein	1	7	High-throughput	0.595	High
449037	TOP2 DNA topoisomerase 2	2	8	High-throughput	0.584	High
580313	HSC82 ATP-dependent molecular chaperone HSC82	3	3	High-throughput	0.578	High
448249	HAP2 Transcriptional activator HAP2	1	1	High-throughput	0.575	High
713066	MCM2 DNA replication licensing factor MCM2	1	20	High-throughput	0.575	High
734505	BTAF1 TATA-binding protein-associated factor MOT1	1	20	High-throughput	0.575	High
781824	SET3 SET domain-containing protein 3	1	11	High-throughput	0.575	High
794025	TAF5 SAGA complex/transcription factor TFIID complex subunit TAF5	1	7	High-throughput	0.575	High
820455	RT106 Histone chaperone RTT106	1	1	High-throughput	0.575	High
863973	SET2 Histone-lysine N-methyltransferase, H3 lysine-36 specific	1	12	High-throughput	0.575	High
916627	TAF6 SAGA complex/transcription factor TFIID complex subunit TAF6	1	2	High-throughput	0.575	High
1046014	IOC4 ISWI one complex protein 4	1	1	High-throughput	0.575	High
1048425	RCO1 Transcriptional regulatory protein RCO1	1	20	High-throughput	0.575	High
1055396	RSC2 Chromatin structure-remodeling complex subunit RSC2	1	20	High-throughput	0.575	High
1064908	ISW2 ISWI chromatin-remodeling complex ATPase ISW2	1	20	High-throughput	0.575	High
1084909	EAF3 Chromatin modification-related protein EAF3	1	7	High-throughput	0.575	High
1084993	CAF1A Chromatin assembly factor 1 subunit A	1	3	High-throughput	0.575	High
561555	TBP TATA-box-binding protein	2	2	Small-scale	0.571	High
678358	RSC6 Chromatin structure-remodeling complex protein RSC6	2	3	High-throughput	0.571	High
745636	RSC7 Chromatin structure-remodeling complex subunit RSC7	2	1	High-throughput	0.571	High
764047	SPT10 Protein SPT10	2	1	High-throughput	0.571	High
807185	FKBP3 Peptidyl-prolyl cis-trans isomerase	2	7	High-throughput	0.571	High
850609	RSC8 Chromatin structure-remodeling complex protein RSC8	2	11	High-throughput	0.571	High
1035361	RSC4 Chromatin structure-remodeling complex subunit RSC4	2	20	High-throughput	0.571	High
1041016	RSC9 Chromatin structure-remodeling complex subunit RSC9	2	2	High-throughput	0.571	High
1054274	FKBP4 FK506-binding protein 4	2	7	High-throughput	0.571	High
1059311	BDF2 Bromodomain-containing factor 2	2	20	High-throughput	0.571	High
1084889	ARP7 Actin-related protein 7	2	15	High-throughput	0.571	High
1084153	TAF10 SAGA complex/transcription factor TFIID complex subunit TAF10	2	0	Small-scale	0.547	High
547841	NHP6A Non-histone chromosomal protein 6A	1	20	High-throughput	0.541	High
546900	SSB1 Ribosome-associated molecular chaperone SSB1	1	8	High-throughput	0.536	High
752932	HSP78 Heat shock protein 78, mitochondrial	2	4	High-throughput	0.521	High
864352	NET1 Nucleolar protein NET1	2	1	High-throughput	0.521	High
817662	UTP7 U3 small nucleolar RNA-associated protein 7	1	6	High-throughput	0.514	High
440875	KIN28 Serine/threonine-protein kinase KIN28	1	6	High-throughput	0.501	High
646001	DBF2 Cell cycle protein kinase DBF2	1	12	Small-scale	0.501	High
1044572	CTK1 CTD kinase subunit alpha	1	10	High-throughput	0.501	High
781072	T2EA Transcription initiation factor IIE subunit alpha	1	0	High-throughput	0.493	High
782507	RPF2 Ribosome biogenesis protein RPF2	1	2	High-throughput	0.489	High
917520	PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43	1	4	High-throughput	0.489	High
1039699	ELP3 Elongator complex protein 3	1	0	Small-scale	0.480	High
1048265	NAA40 N-alpha-acetyltransferase 40	1	0	High-throughput	0.480	High
393590	HSP82 ATP-dependent molecular chaperone HSP82	1	3	High-throughput	0.479	High
402160	RPB1 DNA-directed RNA polymerase II subunit RPB1	1	6	High-throughput	0.479	High
435460	RS3 Small ribosomal subunit protein uS3	1	4	High-throughput	0.479	High
448343	PDE2 3',5'-cyclic-nucleotide phosphodiesterase 2	1	2	High-throughput	0.479	High
628101	FKBP FK506-binding protein 1	1	7	Small-scale	0.479	High
641454	RCC1 Guanine nucleotide exchange factor SRM1	1	5	Small-scale	0.479	High
647870	RFA1 Replication factor A protein 1	1	5	Small-scale	0.479	High
653811	APN1 Apurinic-apyrimidinic endonuclease 1	1	1	High-throughput	0.479	High
708643	TF2B Transcription initiation factor IIB	1	2	High-throughput	0.479	High
713598	RIF1 Telomere length regulator protein RIF1	1	2	Small-scale	0.479	High
727437	HS104 Heat shock protein 104	1	4	High-throughput	0.479	High
764182	SPT21 Protein SPT21	1	1	High-throughput	0.479	High
776684	DEF1 RNA polymerase II degradation factor 1	1	3	Small-scale	0.479	High
794297	CHK1 Serine/threonine-protein kinase CHK1	1	2	High-throughput	0.479	High
796045	LDB7 Chromatin structure-remodeling complex protein RSC14	1	1	High-throughput	0.479	High
808943	UME6 Transcriptional regulatory protein UME6	1	1	High-throughput	0.479	High
816573	SNU13 13 kDa ribonucleoprotein-associated protein	1	4	High-throughput	0.479	High
824822	MLP2 Protein MLP2	1	15	High-throughput	0.479	High
826124	ULP2 Ubiquitin-like-specific protease 2	1	3	High-throughput	0.479	High
826971	DSN1 Kinetochore-associated protein DSN1	1	1	High-throughput	0.479	High
925172	APJ1 J domain-containing protein APJ1	1	6	High-throughput	0.479	High
1036970	ABF2 ARS-binding factor 2, mitochondrial	1	20	High-throughput	0.479	High
1044614	HMO1 High mobility group protein 1	1	20	High-throughput	0.479	High
1050256	TAF9 SAGA complex/transcription factor TFIID complex subunit TAF9	1	1	Small-scale	0.479	High
1054885	TFC6 Transcription factor tau 91 kDa subunit	1	1	High-throughput	0.479	High
1064310	SGO1 Shugoshin	1	1	High-throughput	0.479	High
1084513	PSH1 RING finger protein PSH1	1	6	Small-scale	0.479	High
1085043	HTL1 High temperature lethal protein 1	1	1	Small-scale	0.479	High
740772	SRP40 Suppressor protein SRP40	1	2	High-throughput	0.470	High
858157	SYEC Glutamate--tRNA ligase, cytoplasmic	1	3	High-throughput	0.470	High
1084734	SMT3 Ubiquitin-like protein SMT3	1	0	High-throughput	0.460	High
745927	GSP1 GTP-binding nuclear protein GSP1/CNR1	1	0	High-throughput	0.458	High
809449	STM1 Suppressor protein STM1	1	0	Small-scale	0.458	High
1046567	YD514 Uncharacterized protein YDR514C	1	0	Small-scale	0.458	High
1046900	DPB4 DNA polymerase epsilon subunit D	1	0	Small-scale	0.458	High
1054927	VPS74 Vacuolar protein sorting-associated protein 74	1	0	High-throughput	0.458	High
1064499	IES4 Ino eighty subunit 4	1	0	Small-scale	0.458	High
1084264	MLH3 DNA mismatch repair protein MLH3	1	0	High-throughput	0.458	High
489021	SWI6 Regulatory protein SWI6	1	7	High-throughput	0.445	High
525682	HSP71 Heat shock protein SSA1	1	8	High-throughput	0.445	High
528129	HSP72 Heat shock protein SSA2	1	8	High-throughput	0.445	High
548810	MCM1 Pheromone receptor transcription factor	1	2	High-throughput	0.445	High
576029	CYPH Peptidyl-prolyl cis-trans isomerase	1	1	High-throughput	0.445	High
645656	AFT1 Iron-regulated transcriptional activator AFT1	1	1	High-throughput	0.445	High
664482	MCM3 DNA replication licensing factor MCM3	1	20	High-throughput	0.445	High
671576	SWI4 Regulatory protein SWI4	1	7	High-throughput	0.445	High
676507	MAS5 Mitochondrial protein import protein MAS5	1	6	High-throughput	0.445	High
713320	MCM5 Minichromosome maintenance protein 5	1	20	High-throughput	0.445	High
737435	FKBP2 Peptidyl-prolyl cis-trans isomerase FPR2	1	5	High-throughput	0.445	High
742772	HSP7F Heat shock protein homolog SSE1	1	13	High-throughput	0.445	High
757574	YOX1 Homeobox protein YOX1	1	3	High-throughput	0.445	High
763407	TAF14 Transcription initiation factor TFIID subunit 14	1	7	High-throughput	0.445	High
804016	RSC30 Chromatin structure-remodeling complex protein RSC30	1	4	High-throughput	0.445	High
811445	CAJ1 Protein CAJ1	1	7	High-throughput	0.445	High
816631	EAF5 Chromatin modification-related protein EAF5	1	2	Small-scale	0.445	High
820227	SSB2 Ribosome-associated molecular chaperone SSB2	1	8	High-throughput	0.445	High
850393	IOC3 ISWI one complex protein 3	1	2	High-throughput	0.445	High
858490	TAF1 Transcription initiation factor TFIID subunit 1	1	1	High-throughput	0.445	High
864391	SMC3 Structural maintenance of chromosomes protein 3	1	5	High-throughput	0.445	High
893384	TAF4 Transcription initiation factor TFIID subunit 4	1	3	High-throughput	0.445	High
917084	MCM6 DNA replication licensing factor MCM6	1	20	High-throughput	0.445	High
917411	ITC1 Imitation switch two complex protein 1	1	5	High-throughput	0.445	High
932322	ORC3 Origin recognition complex subunit 3	1	1	High-throughput	0.445	High
1026876	CDC14 Tyrosine-protein phosphatase CDC14	1	2	High-throughput	0.445	High
1036953	TBF1 Protein TBF1	1	1	High-throughput	0.445	High
1043455	YE11B Transposon Ty1-ER1 Gag-Pol polyprotein	1	1	High-throughput	0.445	High
1043998	TAF12 SAGA complex/transcription factor TFIID complex subunit TAF12	1	1	High-throughput	0.445	High
1044178	GIS1 Transcriptional activator/repressor GIS1	1	3	High-throughput	0.445	High
1050608	ARP9 Actin-like protein ARP9	1	12	High-throughput	0.445	High
1056362	RSC3 Chromatin structure-remodeling complex protein RSC3	1	4	High-throughput	0.445	High
1061392	RSC58 Chromatin structure-remodeling complex protein RSC58	1	1	High-throughput	0.445	High
1084856	ARP8 Actin-like protein ARP8	1	12	High-throughput	0.445	High
150029	RS9A Small ribosomal subunit protein uS4A	1	1	High-throughput	0.437	High
367281	ATP6 ATP synthase subunit a	1	1	Small-scale	0.437	High
383967	RS17A Small ribosomal subunit protein eS17A	1	3	High-throughput	0.437	High
753669	RS3A1 Small ribosomal subunit protein eS1A	1	2	High-throughput	0.437	High
410416	RL25 Large ribosomal subunit protein uL23	1	2	High-throughput	0.437	High
433920	RL26A Large ribosomal subunit protein uL24A	1	5	High-throughput	0.437	High
436248	RS13 Small ribosomal subunit protein uS15	1	2	High-throughput	0.437	High
442191	RS14A Small ribosomal subunit protein uS11A	1	1	High-throughput	0.437	High
455336	RS19A Small ribosomal subunit protein eS19A	1	4	High-throughput	0.437	High
503318	RS22A Small ribosomal subunit protein uS8A	1	1	High-throughput	0.437	High
504492	RL31A Large ribosomal subunit protein eL31A	1	3	High-throughput	0.437	High
512732	RS6A Small ribosomal subunit protein eS6A	1	3	High-throughput	0.437	High
513299	RS8A Small ribosomal subunit protein eS8A	1	2	High-throughput	0.437	High
674914	RS2 Small ribosomal subunit protein uS5	1	3	High-throughput	0.437	High
677640	KRR1 KRR1 small subunit processome component	1	5	High-throughput	0.437	High
682438	SPB4 ATP-dependent rRNA helicase SPB4	1	8	High-throughput	0.437	High
689740	RS7A Small ribosomal subunit protein eS7A	1	2	High-throughput	0.437	High
745115	AFG2 ATPase family gene 2 protein	1	3	Small-scale	0.437	High
747661	RSSA1 Small ribosomal subunit protein uS2A	1	1	High-throughput	0.437	High
778609	RS27A Small ribosomal subunit protein eS27A	1	1	High-throughput	0.437	High
786004	LONM Lon protease homolog, mitochondrial	1	3	High-throughput	0.437	High
802464	RS20 Small ribosomal subunit protein uS10	1	1	High-throughput	0.437	High
803976	CIC1 Proteasome-interacting protein CIC1	1	2	High-throughput	0.437	High
812802	LAA1 AP-1 accessory protein LAA1	1	1	High-throughput	0.437	High
815292	IF4F1 Eukaryotic initiation factor 4F subunit p150	1	2	High-throughput	0.437	High
825791	MAM33 Mitochondrial acidic protein MAM33	1	1	High-throughput	0.437	High
827653	RLP7 Ribosome biogenesis protein RLP7	1	2	High-throughput	0.437	High
923902	GIS2 Zinc finger protein GIS2	1	2	High-throughput	0.437	High
925411	SAM50 Sorting assembly machinery 50 kDa subunit	1	1	High-throughput	0.437	High
1033650	RS15 Small ribosomal subunit protein uS19	1	4	High-throughput	0.437	High
1050007	COX20 Cytochrome c oxidase assembly protein COX20, mitochondrial	1	2	High-throughput	0.437	High
1062801	BRX1 Ribosome biogenesis protein BRX1	1	7	High-throughput	0.437	High
1064844	RS10A Small ribosomal subunit protein eS10A	1	3	High-throughput	0.437	High
645285	GAS1 1,3-beta-glucanosyltransferase GAS1	1	0	High-throughput	0.426	High
863194	YPP1 Cargo-transport protein YPP1	1	0	High-throughput	0.426	High
932287	MOT3 Transcriptional activator/repressor MOT3	1	0	High-throughput	0.426	High
1057436	RAF Trans-acting factor D	1	0	High-throughput	0.426	High
1061507	CDC45 Cell division control protein 45	1	0	High-throughput	0.426	High
661705	MPCP Mitochondrial phosphate carrier protein	1	4	High-throughput	0.407	High
755202	GCN1 eIF-2-alpha kinase activator GCN1	1	8	High-throughput	0.407	High
826518	DJP1 DnaJ-like protein 1	1	7	High-throughput	0.407	High
851036	CSK2B Casein kinase II subunit beta	1	2	High-throughput	0.407	High
858407	STU2 Protein STU2	1	3	High-throughput	0.407	High
871458	HLJ1 Protein HLJ1	1	3	High-throughput	0.407	High
1056468	SWA2 Auxilin-like clathrin uncoating factor SWA2	1	1	High-throughput	0.407	High
864869	MPS3 Spindle pole body assembly component MPS3	6	0	Small-scale	0.382	High
932645	TMEDA Endoplasmic reticulum vesicle protein 25	1	0	High-throughput	0.269	Low
514907	RS18A Small ribosomal subunit protein uS13A	1	0	High-throughput	0.249	Low
705239	PEX3 Peroxisomal biogenesis factor 3	1	0	High-throughput	0.249	Low
918506	EIF2A Eukaryotic translation initiation factor 2A	1	0	High-throughput	0.249	Low
1062779	YO075 Uncharacterized ABC transporter ATP-binding protein/permease YOL075C	1	0	Small-scale	0.249	Low
439178	ILV5 Ketol-acid reductoisomerase, mitochondrial	1	0	High-throughput	0.232	Low
452543	PUR2 Bifunctional purine biosynthetic protein ADE5,7 [Includes: Phosphoribosylamine--glycine ligase	1	0	High-throughput	0.232	Low
618637	FAS2 Fatty acid synthase subunit alpha	1	0	High-throughput	0.232	Low
790239	GLYC Serine hydroxymethyltransferase, cytosolic	1	0	High-throughput	0.232	Low
863807	PFD1 Prefoldin subunit 1	1	0	High-throughput	0.232	Low
868467	LCF4 Long-chain-fatty-acid--CoA ligase 4	1	0	High-throughput	0.232	Low