Protein: FAF1
Protein FAF1 (Forty S assembly factor)

Gene: FAF1
Organism: Saccharomyces cerevisiae S288C
Interactions: 79
UniProt ID: P40546

Gene Ontology (top 5):
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 - nucleus
GO:0005730 - nucleolus
GO:0005737 - cytoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

677438

KRR1
KRR1 small subunit processome component

5

0

Small-scale

0.693

High

798236

ENP1
Essential nuclear protein 1

4

0

Small-scale

0.657

High

826206

DHR1
Probable ATP-dependent RNA helicase DHR1

4

0

Small-scale

0.657

High

678404

PWP2
Periodic tryptophan protein 2

3

1

Small-scale

0.656

High

826189

UTP10
U3 small nucleolar RNA-associated protein 10

3

0

Small-scale

0.628

High

826217

NOC4
Nucleolar complex protein 4

3

0

Small-scale

0.628

High

826203

UTP17
NET1-associated nuclear protein 1

2

3

Small-scale

0.611

High

826205

UTP5
U3 small nucleolar RNA-associated protein 5

2

1

Small-scale

0.611

High

826212

UTP13
U3 small nucleolar RNA-associated protein 13

2

2

Small-scale

0.611

High

826213

UTP21
U3 small nucleolar RNA-associated protein 21

2

2

Small-scale

0.611

High

826219

UTP4
U3 small nucleolar RNA-associated protein 4

2

1

Small-scale

0.611

High

826230

UTP12
U3 small nucleolar RNA-associated protein 12

2

2

Small-scale

0.611

High

747021

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

2

0

Small-scale

0.585

High

754294

DCA13
Protein SOF1

2

0

Small-scale

0.585

High

758379

UTP11
U3 small nucleolar RNA-associated protein 11

2

0

Small-scale

0.585

High

763577

UTP20
U3 small nucleolar RNA-associated protein 20

2

0

Small-scale

0.585

High

782074

RL1D1
Ribosome biogenesis protein UTP30

2

0

Small-scale

0.585

High

806531

UTP9
U3 small nucleolar RNA-associated protein 9

2

0

Small-scale

0.585

High

817581

UTP7
U3 small nucleolar RNA-associated protein 7

2

0

Small-scale

0.585

High

818310

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

2

0

Small-scale

0.585

High

823342

UTP18
U3 small nucleolar RNA-associated protein 18

2

0

Small-scale

0.585

High

826193

MPP10
U3 small nucleolar RNA-associated protein MPP10

2

0

Small-scale

0.585

High

826195

UTP22
U3 small nucleolar RNA-associated protein 22

2

0

Small-scale

0.585

High

826197

UTP8
U3 small nucleolar RNA-associated protein 8

2

0

Small-scale

0.585

High

826200

NAT10
RNA cytidine acetyltransferase

2

0

Small-scale

0.585

High

826201

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

2

0

Small-scale

0.585

High

826207

UTP15
U3 small nucleolar RNA-associated protein 15

2

0

Small-scale

0.585

High

826210

FCF1
rRNA-processing protein FCF1

2

0

Small-scale

0.585

High

826214

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

2

0

Small-scale

0.585

High

826216

RRP9
Ribosomal RNA-processing protein 9

2

0

Small-scale

0.585

High

826218

BFR2
Protein BFR2

2

0

Small-scale

0.585

High

826221

RCL1
rRNA processing protein RCL1

2

0

Small-scale

0.585

High

826224

UTP16
U3 small nucleolar RNA-associated protein 16

2

0

Small-scale

0.585

High

826226

BMS1
Ribosome biogenesis protein BMS1

2

0

Small-scale

0.585

High

826227

FCF2
rRNA-processing protein FCF2

2

0

Small-scale

0.585

High

826228

SAS10
Something about silencing protein 10

2

0

Small-scale

0.585

High

826237

NOP14
Nucleolar complex protein 14

2

0

Small-scale

0.585

High

826238

PNO1
Pre-rRNA-processing protein PNO1

2

0

Small-scale

0.585

High

826234

NOP58
Nucleolar protein 58

2

1

High-throughput

0.584

High

826208

UTP14
U3 small nucleolar RNA-associated protein 14

2

0

High-throughput

0.559

High

436009

RS13
Small ribosomal subunit protein uS15

1

0

Small-scale

0.513

High

585293

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

Small-scale

0.513

High

688906

RS5
Small ribosomal subunit protein uS7

1

0

Small-scale

0.513

High

689504

RS7A
Small ribosomal subunit protein eS7A

1

0

Small-scale

0.513

High

753416

RS3A1
Small ribosomal subunit protein eS1A

1

0

Small-scale

0.513

High

826191

RRP41
Exosome complex component SKI6

1

2

High-throughput

0.479

High

826196

RRP46
Exosome complex component RRP46

1

1

High-throughput

0.479

High

826211

RRP45
Exosome complex component RRP45

1

2

High-throughput

0.479

High

826231

RRP42
Exosome complex component RRP42

1

2

High-throughput

0.479

High

826232

NOP56
Nucleolar protein 56

1

1

High-throughput

0.479

High

780683

RRP14
Ribosomal RNA-processing protein 14

1

0

Small-scale

0.460

High

632687

DBP4
ATP-dependent RNA helicase HCA4

1

0

High-throughput

0.458

High

672899

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

673189

RRP7
Ribosomal RNA-processing protein 7

1

0

High-throughput

0.458

High

707324

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

735387

MCM10
Minichromosome maintenance protein 10

1

0

High-throughput

0.458

High

804719

RRP4
Exosome complex component RRP4

1

0

High-throughput

0.458

High

804932

LRP1
Exosome complex protein LRP1

1

0

High-throughput

0.458

High

808281

RRP8
25S rRNA

1

0

High-throughput

0.458

High

825055

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

825528

UTP25
U3 small nucleolar RNA-associated protein 25

1

0

High-throughput

0.458

High

826190

ROK1
ATP-dependent RNA helicase ROK1

1

0

High-throughput

0.458

High

826192

MTR4
ATP-dependent RNA helicase DOB1

1

0

High-throughput

0.458

High

826194

NOL10
Ribosome biogenesis protein ENP2

1

0

High-throughput

0.458

High

826198

ESF2
Pre-rRNA-processing protein ESF2

1

0

High-throughput

0.458

High

826199

CSL4
Exosome complex component CSL4

1

0

High-throughput

0.458

High

826202

UTP6
U3 small nucleolar RNA-associated protein 6

1

0

High-throughput

0.458

High

826204

TOM1
E3 ubiquitin-protein ligase TOM1

1

0

High-throughput

0.458

High

826209

RRP5
rRNA biogenesis protein RRP5

1

0

High-throughput

0.458

High

826215

ESF1
Pre-rRNA-processing protein ESF1

1

0

High-throughput

0.458

High

826220

CMS1
Protein CMS1

1

0

High-throughput

0.458

High

826222

RRP44
Exosome complex exonuclease DIS3

1

0

High-throughput

0.458

High

826223

RRP40
Exosome complex component RRP40

1

0

High-throughput

0.458

High

826229

RRP6
Exosome complex exonuclease RRP6

1

0

High-throughput

0.458

High

826233

RRP36
rRNA biogenesis protein RRP36

1

0

High-throughput

0.458

High

826235

RRP12
Ribosomal RNA-processing protein 12

1

0

High-throughput

0.458

High

503087

RS22A
Small ribosomal subunit protein uS8A

1

1

High-throughput

0.437

High

826236

RS22B
Small ribosomal subunit protein uS8B

1

1

High-throughput

0.437

High

826225

RU2A
U2 small nuclear ribonucleoprotein A'

1

0

Small-scale

0.409

High


Service provided by Combinatics, Japan

Last updated: 11Aug2025