Protein: UTP11
U3 small nucleolar RNA-associated protein 11 (U3 snoRNA-associated protein 11) (U three protein 11)

Gene: UTP11
Organism: Saccharomyces cerevisiae S288C
Interactions: 92
UniProt ID: P34247

Gene Ontology (top 5):
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005654 - nucleoplasm
GO:0005730 - nucleolus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

678379

PWP2
Periodic tryptophan protein 2

5

1

High-throughput

0.703

High

758402

DHR1
Probable ATP-dependent RNA helicase DHR1

4

0

Small-scale

0.648

High

758414

NOC4
Nucleolar complex protein 4

4

0

Small-scale

0.648

High

758366

ENP1
Essential nuclear protein 1

4

0

Small-scale

0.643

High

758432

NOP58
Nucleolar protein 58

3

1

Small-scale

0.640

High

585248

FBRL
rRNA 2'-O-methyltransferase fibrillarin

2

1

High-throughput

0.614

High

758380

UTP10
U3 small nucleolar RNA-associated protein 10

3

0

High-throughput

0.613

High

758386

MPP10
U3 small nucleolar RNA-associated protein MPP10

2

1

Small-scale

0.611

High

758425

SAS10
Something about silencing protein 10

2

0

High-throughput

0.588

High

758376

UTP18
U3 small nucleolar RNA-associated protein 18

2

0

High-throughput

0.585

High

758379

FAF1
Protein FAF1

2

0

Small-scale

0.585

High

758385

MTR4
ATP-dependent RNA helicase DOB1

2

1

Small-scale

0.584

High

758409

UTP21
U3 small nucleolar RNA-associated protein 21

2

2

Small-scale

0.584

High

758416

UTP4
U3 small nucleolar RNA-associated protein 4

2

1

Small-scale

0.584

High

758364

RPF2
Ribosome biogenesis protein RPF2

2

0

High-throughput

0.576

High

677339

KRR1
KRR1 small subunit processome component

2

0

High-throughput

0.559

High

758396

CSL4
Exosome complex component CSL4

2

0

High-throughput

0.559

High

758404

UTP14
U3 small nucleolar RNA-associated protein 14

2

0

High-throughput

0.559

High

758426

RRP6
Exosome complex exonuclease RRP6

2

0

High-throughput

0.559

High

622914

CSK22
Casein kinase II subunit alpha'

1

0

High-throughput

0.518

High

758381

CSK2B
Casein kinase II subunit beta

1

0

High-throughput

0.518

High

632652

DBP4
ATP-dependent RNA helicase HCA4

1

2

High-throughput

0.479

High

682230

SPB4
ATP-dependent rRNA helicase SPB4

1

2

High-throughput

0.479

High

758363

RL1D1
Ribosome biogenesis protein UTP30

1

1

High-throughput

0.479

High

758384

RRP41
Exosome complex component SKI6

1

2

High-throughput

0.479

High

758391

RRP46
Exosome complex component RRP46

1

2

High-throughput

0.479

High

758400

UTP17
NET1-associated nuclear protein 1

1

3

High-throughput

0.479

High

758401

UTP5
U3 small nucleolar RNA-associated protein 5

1

1

High-throughput

0.479

High

758407

RRP45
Exosome complex component RRP45

1

2

High-throughput

0.479

High

758408

UTP13
U3 small nucleolar RNA-associated protein 13

1

2

High-throughput

0.479

High

758419

RRP44
Exosome complex exonuclease DIS3

1

1

High-throughput

0.479

High

758423

BMS1
Ribosome biogenesis protein BMS1

1

2

High-throughput

0.479

High

758427

UTP12
U3 small nucleolar RNA-associated protein 12

1

2

High-throughput

0.479

High

758428

RRP42
Exosome complex component RRP42

1

2

High-throughput

0.479

High

758430

NOP56
Nucleolar protein 56

1

1

High-throughput

0.479

High

758362

RRP14
Ribosomal RNA-processing protein 14

1

0

Small-scale

0.460

High

672867

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

673159

RRP7
Ribosomal RNA-processing protein 7

1

0

High-throughput

0.458

High

747007

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

0

High-throughput

0.458

High

754263

DCA13
Protein SOF1

1

0

High-throughput

0.458

High

758361

UTP20
U3 small nucleolar RNA-associated protein 20

1

0

High-throughput

0.458

High

758367

DBP8
ATP-dependent RNA helicase DBP8

1

0

High-throughput

0.458

High

758368

RRP4
Exosome complex component RRP4

1

0

High-throughput

0.458

High

758369

LRP1
Exosome complex protein LRP1

1

0

High-throughput

0.458

High

758370

UTP9
U3 small nucleolar RNA-associated protein 9

1

0

High-throughput

0.458

High

758371

RRP8
25S rRNA

1

0

High-throughput

0.458

High

758373

UTP7
U3 small nucleolar RNA-associated protein 7

1

0

High-throughput

0.458

High

758374

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

0

High-throughput

0.458

High

758377

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

758378

UTP25
U3 small nucleolar RNA-associated protein 25

1

0

High-throughput

0.458

High

758382

ROK1
ATP-dependent RNA helicase ROK1

1

0

High-throughput

0.458

High

758387

NOL10
Ribosome biogenesis protein ENP2

1

0

High-throughput

0.458

High

758388

MTR3
Exosome complex component MTR3

1

0

High-throughput

0.458

High

758390

UTP22
U3 small nucleolar RNA-associated protein 22

1

0

High-throughput

0.458

High

758392

UTP8
U3 small nucleolar RNA-associated protein 8

1

0

High-throughput

0.458

High

758394

ESF2
Pre-rRNA-processing protein ESF2

1

0

High-throughput

0.458

High

758397

NAT10
RNA cytidine acetyltransferase

1

0

High-throughput

0.458

High

758398

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

0

High-throughput

0.458

High

758399

UTP6
U3 small nucleolar RNA-associated protein 6

1

0

High-throughput

0.458

High

758403

UTP15
U3 small nucleolar RNA-associated protein 15

1

0

High-throughput

0.458

High

758405

RRP5
rRNA biogenesis protein RRP5

1

0

High-throughput

0.458

High

758406

FCF1
rRNA-processing protein FCF1

1

0

High-throughput

0.458

High

758410

SGD1
Suppressor of glycerol defect protein 1

1

0

High-throughput

0.458

High

758411

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

0

High-throughput

0.458

High

758412

ESF1
Pre-rRNA-processing protein ESF1

1

0

High-throughput

0.458

High

758413

RRP9
Ribosomal RNA-processing protein 9

1

0

High-throughput

0.458

High

758415

BFR2
Protein BFR2

1

0

High-throughput

0.458

High

758418

RCL1
rRNA processing protein RCL1

1

0

High-throughput

0.458

High

758420

RRP40
Exosome complex component RRP40

1

0

High-throughput

0.458

High

758422

UTP16
U3 small nucleolar RNA-associated protein 16

1

0

High-throughput

0.458

High

758424

FCF2
rRNA-processing protein FCF2

1

0

High-throughput

0.458

High

758429

DBP10
ATP-dependent RNA helicase DBP10

1

0

High-throughput

0.458

High

758431

RRP36
rRNA biogenesis protein RRP36

1

0

High-throughput

0.458

High

758433

RRP12
Ribosomal RNA-processing protein 12

1

0

High-throughput

0.458

High

758435

NOP14
Nucleolar complex protein 14

1

0

High-throughput

0.458

High

758436

PNO1
Pre-rRNA-processing protein PNO1

1

0

High-throughput

0.458

High

544374

SSB1
Ribosome-associated molecular chaperone SSB1

1

1

High-throughput

0.445

High

758375

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.445

High

436369

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

1

High-throughput

0.437

High

502960

RS22A
Small ribosomal subunit protein uS8A

1

1

High-throughput

0.437

High

758434

RS22B
Small ribosomal subunit protein uS8B

1

1

High-throughput

0.437

High

392514

HSP82
ATP-dependent molecular chaperone HSP82

3

0

High-throughput

0.334

High

758389

CLA4
Serine/threonine-protein kinase CLA4

1

0

High-throughput

0.261

Low

758383

SCD6
Protein SCD6

1

0

Small-scale

0.251

Low

558668

CAF20
Cap-associated protein CAF20

1

0

High-throughput

0.249

Low

706709

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.249

Low

758365

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

758372

UME6
Transcriptional regulatory protein UME6

1

0

High-throughput

0.249

Low

758393

MPP6
M-phase phosphoprotein 6 homolog

1

0

High-throughput

0.249

Low

758395

GIS2
Zinc finger protein GIS2

1

0

High-throughput

0.249

Low

758417

CMS1
Protein CMS1

1

0

High-throughput

0.249

Low

758421

SGO1
Shugoshin

1

0

High-throughput

0.249

Low


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Last updated: 11Aug2025