Protein: LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

Gene: LCP5
Organism: Saccharomyces cerevisiae S288C
Interactions: 116
UniProt ID: P40079

Gene Ontology (top 5):
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005730 - nucleolus
GO:0005732 - sno(s)RNA-containing ribonucleoprotein complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

818352

BFR2
Protein BFR2

5

4

Small-scale

0.723

High

678396

PWP2
Periodic tryptophan protein 2

4

1

Small-scale

0.688

High

818351

NOC4
Nucleolar complex protein 4

5

0

Small-scale

0.680

High

677417

KRR1
KRR1 small subunit processome component

4

1

High-throughput

0.678

High

818307

UTP18
U3 small nucleolar RNA-associated protein 18

3

0

High-throughput

0.641

High

818313

UTP10
U3 small nucleolar RNA-associated protein 10

3

0

High-throughput

0.630

High

818334

UTP5
U3 small nucleolar RNA-associated protein 5

2

1

High-throughput

0.614

High

818343

SGD1
Suppressor of glycerol defect protein 1

2

1

Small-scale

0.614

High

798228

ENP1
Essential nuclear protein 1

3

0

High-throughput

0.613

High

818335

DHR1
Probable ATP-dependent RNA helicase DHR1

3

0

Small-scale

0.613

High

818347

ESF1
Pre-rRNA-processing protein ESF1

2

1

High-throughput

0.611

High

818309

UTP25
U3 small nucleolar RNA-associated protein 25

2

0

High-throughput

0.588

High

818332

UTP6
U3 small nucleolar RNA-associated protein 6

2

0

High-throughput

0.588

High

818310

FAF1
Protein FAF1

2

0

Small-scale

0.585

High

818325

ESF2
Pre-rRNA-processing protein ESF2

2

1

Small-scale

0.584

High

818326

NAT10
RNA cytidine acetyltransferase

2

1

High-throughput

0.584

High

818342

UTP21
U3 small nucleolar RNA-associated protein 21

2

2

Small-scale

0.584

High

818353

UTP4
U3 small nucleolar RNA-associated protein 4

2

1

Small-scale

0.584

High

818366

NOP58
Nucleolar protein 58

2

1

High-throughput

0.584

High

818354

RCL1
rRNA processing protein RCL1

2

0

Small-scale

0.576

High

818338

UTP14
U3 small nucleolar RNA-associated protein 14

2

0

High-throughput

0.559

High

585948

CSK21
Casein kinase II subunit alpha

1

0

High-throughput

0.518

High

779128

DHR2
Probable ATP-dependent RNA helicase DHR2

1

0

High-throughput

0.518

High

802754

RRP3
ATP-dependent rRNA helicase RRP3

1

0

High-throughput

0.518

High

818305

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

0

High-throughput

0.518

High

818359

FAL1
ATP-dependent RNA helicase FAL1

1

0

High-throughput

0.518

High

782345

RPF2
Ribosome biogenesis protein RPF2

1

0

High-throughput

0.513

High

149793

RS9A
Small ribosomal subunit protein uS4A

1

2

High-throughput

0.479

High

441937

RS14A
Small ribosomal subunit protein uS11A

1

1

High-throughput

0.479

High

512468

RS6A
Small ribosomal subunit protein eS6A

1

1

High-throughput

0.479

High

513036

RS8A
Small ribosomal subunit protein eS8A

1

1

High-throughput

0.479

High

632681

DBP4
ATP-dependent RNA helicase HCA4

1

2

High-throughput

0.479

High

674655

RS2
Small ribosomal subunit protein uS5

1

1

High-throughput

0.479

High

747018

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

2

High-throughput

0.479

High

747398

RSSA1
Small ribosomal subunit protein uS2A

1

2

High-throughput

0.479

High

817576

UTP7
U3 small nucleolar RNA-associated protein 7

1

2

High-throughput

0.479

High

818318

NOL10
Ribosome biogenesis protein ENP2

1

1

High-throughput

0.479

High

818333

UTP17
NET1-associated nuclear protein 1

1

3

High-throughput

0.479

High

818341

UTP13
U3 small nucleolar RNA-associated protein 13

1

3

High-throughput

0.479

High

818350

RRP9
Ribosomal RNA-processing protein 9

1

2

High-throughput

0.479

High

818362

UTP12
U3 small nucleolar RNA-associated protein 12

1

2

High-throughput

0.479

High

818363

DBP10
ATP-dependent RNA helicase DBP10

1

1

High-throughput

0.479

High

818364

NOP56
Nucleolar protein 56

1

1

High-throughput

0.479

High

435994

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

514663

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.458

High

672894

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

673184

RRP7
Ribosomal RNA-processing protein 7

1

0

High-throughput

0.458

High

689485

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.458

High

754287

DCA13
Protein SOF1

1

0

High-throughput

0.458

High

758374

UTP11
U3 small nucleolar RNA-associated protein 11

1

0

High-throughput

0.458

High

763572

UTP20
U3 small nucleolar RNA-associated protein 20

1

0

High-throughput

0.458

High

782069

RL1D1
Ribosome biogenesis protein UTP30

1

0

High-throughput

0.458

High

806527

UTP9
U3 small nucleolar RNA-associated protein 9

1

0

High-throughput

0.458

High

808279

RRP8
25S rRNA

1

0

High-throughput

0.458

High

818308

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

818312

DIM1
Dimethyladenosine transferase

1

0

High-throughput

0.458

High

818314

ROK1
ATP-dependent RNA helicase ROK1

1

0

High-throughput

0.458

High

818315

MTR4
ATP-dependent RNA helicase DOB1

1

0

High-throughput

0.458

High

818317

MPP10
U3 small nucleolar RNA-associated protein MPP10

1

0

High-throughput

0.458

High

818319

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.458

High

818322

UTP22
U3 small nucleolar RNA-associated protein 22

1

0

High-throughput

0.458

High

818324

UTP8
U3 small nucleolar RNA-associated protein 8

1

0

High-throughput

0.458

High

818327

NOP15
Ribosome biogenesis protein 15

1

0

High-throughput

0.458

High

818328

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

0

High-throughput

0.458

High

818336

UTP15
U3 small nucleolar RNA-associated protein 15

1

0

High-throughput

0.458

High

818339

RRP5
rRNA biogenesis protein RRP5

1

0

High-throughput

0.458

High

818340

FCF1
rRNA-processing protein FCF1

1

0

High-throughput

0.458

High

818346

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

0

High-throughput

0.458

High

818355

UTP16
U3 small nucleolar RNA-associated protein 16

1

0

High-throughput

0.458

High

818357

BMS1
Ribosome biogenesis protein BMS1

1

0

High-throughput

0.458

High

818358

FCF2
rRNA-processing protein FCF2

1

0

High-throughput

0.458

High

818360

SAS10
Something about silencing protein 10

1

0

High-throughput

0.458

High

818365

RRP36
rRNA biogenesis protein RRP36

1

0

High-throughput

0.458

High

818367

NOP14
Nucleolar complex protein 14

1

0

High-throughput

0.458

High

818349

SP382
Pre-mRNA-splicing factor SPP382

1

0

High-throughput

0.438

High

455093

RS19A
Small ribosomal subunit protein eS19A

1

2

High-throughput

0.437

High

504241

RL31A
Large ribosomal subunit protein eL31A

1

1

High-throughput

0.437

High

707225

TF2B
Transcription initiation factor IIB

1

1

High-throughput

0.437

High

708744

TF3B
Transcription factor IIIB 70 kDa subunit

1

1

High-throughput

0.437

High

818356

RS10A
Small ribosomal subunit protein eS10A

1

1

High-throughput

0.437

High

670767

SIS1
Protein SIS1

1

0

High-throughput

0.426

High

545046

SSB1
Ribosome-associated molecular chaperone SSB1

1

1

High-throughput

0.407

High

818306

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.407

High

503072

RS22A
Small ribosomal subunit protein uS8A

2

0

High-throughput

0.305

High

818316

SNX4
Sorting nexin-4

1

0

Small-scale

0.282

High

818348

ATG17
Autophagy-related protein 17

1

0

High-throughput

0.282

High

721977

XPO1
Exportin-1

1

0

High-throughput

0.279

Low

814200

RV167
Reduced viability upon starvation protein 167

1

0

Small-scale

0.265

Low

441147

KAPA
cAMP-dependent protein kinase type 1

1

0

High-throughput

0.261

Low

574583

YAK1
Dual specificity protein kinase YAK1

1

0

High-throughput

0.261

Low

656486

KC11
Casein kinase I homolog 1

1

0

High-throughput

0.261

Low

818320

ATG1
Serine/threonine-protein kinase ATG1

1

0

High-throughput

0.261

Low

818329

DAD4
DASH complex subunit DAD4

1

0

High-throughput

0.251

Low

818330

HSK3
DASH complex subunit HSK3

1

0

High-throughput

0.251

Low

818337

SPC24
Kinetochore protein SPC24

1

0

High-throughput

0.251

Low

818344

NKP2
Inner kinetochore subunit NKP2

1

0

High-throughput

0.251

Low

383726

RS17A
Small ribosomal subunit protein eS17A

1

0

High-throughput

0.249

Low

410163

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.249

Low

433671

RL26A
Large ribosomal subunit protein uL24A

1

0

High-throughput

0.249

Low

436431

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

0

High-throughput

0.249

Low

646420

RAD53
Serine/threonine-protein kinase RAD53

1

0

High-throughput

0.249

Low

647125

RPC2
DNA-directed RNA polymerase III subunit RPC2

1

0

High-throughput

0.249

Low

679738

CDC48
Cell division control protein 48

1

0

High-throughput

0.249

Low

739648

SPT16
FACT complex subunit SPT16

1

0

High-throughput

0.249

Low

745754

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

High-throughput

0.249

Low

792075

GBLP
Small ribosomal subunit protein RACK1

1

0

High-throughput

0.249

Low

812342

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

818311

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.249

Low

818321

EIF2A
Eukaryotic translation initiation factor 2A

1

0

High-throughput

0.249

Low

818331

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.249

Low

818345

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.249

Low

818361

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.249

Low

818323

DAM1
DASH complex subunit DAM1

1

0

Small-scale

0.238

Low

524092

HSP71
Heat shock protein SSA1

1

0

High-throughput

0.232

Low

810816

TCPG
T-complex protein 1 subunit gamma

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025