Protein: RRP7
Ribosomal RNA-processing protein 7

Gene: RRP7
Organism: Saccharomyces cerevisiae S288C
Interactions: 144
UniProt ID: P25368

Gene Ontology (top 5):
GO:0000028 - ribosomal small subunit assembly
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0005730 - nucleolus
GO:0006364 - rRNA processing

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

673206

UTP22
U3 small nucleolar RNA-associated protein 22

9

1

Small-scale

0.980

High

585864

CSK21
Casein kinase II subunit alpha

5

1

High-throughput

0.721

High

673144

PWP2
Periodic tryptophan protein 2

4

1

Small-scale

0.676

High

673239

UTP4
U3 small nucleolar RNA-associated protein 4

3

1

Small-scale

0.640

High

673178

IFH1
Protein IFH1

3

0

Small-scale

0.636

High

673194

CSK2B
Casein kinase II subunit beta

2

1

High-throughput

0.614

High

673168

ENP1
Essential nuclear protein 1

3

0

High-throughput

0.613

High

673192

UTP10
U3 small nucleolar RNA-associated protein 10

3

0

High-throughput

0.613

High

673213

NAT10
RNA cytidine acetyltransferase

3

0

High-throughput

0.613

High

673221

DHR1
Probable ATP-dependent RNA helicase DHR1

3

0

High-throughput

0.613

High

673237

NOC4
Nucleolar complex protein 4

3

0

Small-scale

0.613

High

673186

UTP18
U3 small nucleolar RNA-associated protein 18

2

0

High-throughput

0.588

High

673182

UTP7
U3 small nucleolar RNA-associated protein 7

2

2

High-throughput

0.584

High

673219

UTP17
NET1-associated nuclear protein 1

2

3

High-throughput

0.584

High

673225

RRP5
rRNA biogenesis protein RRP5

2

1

High-throughput

0.584

High

673229

UTP13
U3 small nucleolar RNA-associated protein 13

2

3

High-throughput

0.584

High

673230

UTP21
U3 small nucleolar RNA-associated protein 21

2

2

High-throughput

0.584

High

673250

RRP6
Exosome complex exonuclease RRP6

2

1

High-throughput

0.584

High

673253

UTP12
U3 small nucleolar RNA-associated protein 12

2

2

High-throughput

0.584

High

543939

SSB1
Ribosome-associated molecular chaperone SSB1

2

1

High-throughput

0.571

High

673143

KRR1
KRR1 small subunit processome component

2

0

High-throughput

0.559

High

673175

UTP9
U3 small nucleolar RNA-associated protein 9

2

0

High-throughput

0.559

High

673201

NOL10
Ribosome biogenesis protein ENP2

2

0

High-throughput

0.559

High

673209

UTP8
U3 small nucleolar RNA-associated protein 8

2

0

High-throughput

0.559

High

673211

CSL4
Exosome complex component CSL4

2

0

High-throughput

0.559

High

673218

XRN2
5'-3' exoribonuclease 2

2

0

High-throughput

0.559

High

673224

UTP14
U3 small nucleolar RNA-associated protein 14

2

0

High-throughput

0.559

High

673236

RRP9
Ribosomal RNA-processing protein 9

2

0

High-throughput

0.559

High

673238

BFR2
Protein BFR2

2

0

High-throughput

0.559

High

673242

RCL1
rRNA processing protein RCL1

2

0

High-throughput

0.559

High

673235

PIN3
[PSI+] inducibility protein 3

1

1

High-throughput

0.541

High

673150

XPO1
Exportin-1

1

1

High-throughput

0.536

High

416864

CDC25
Cell division control protein 25

1

0

High-throughput

0.518

High

673141

RRP7
Ribosomal RNA-processing protein 7

1

0

High-throughput

0.518

High

673146

BUD14
Bud site selection protein 14

1

0

High-throughput

0.518

High

673151

SLA1
Actin cytoskeleton-regulatory complex protein SLA1

1

0

High-throughput

0.518

High

673198

BBC1
Myosin tail region-interacting protein MTI1

1

0

High-throughput

0.518

High

673179

FKHL1
Pre-rRNA-processing protein FHL1

1

1

Small-scale

0.515

High

673212

UBP10
Ubiquitin carboxyl-terminal hydrolase 10

1

1

High-throughput

0.515

High

673255

UTP23
rRNA-processing protein UTP23

1

2

Small-scale

0.501

High

673180

RV167
Reduced viability upon starvation protein 167

1

2

High-throughput

0.494

High

673193

LSB3
LAS seventeen-binding protein 3

1

1

High-throughput

0.494

High

149607

RS9A
Small ribosomal subunit protein uS4A

1

1

High-throughput

0.479

High

454900

RS19A
Small ribosomal subunit protein eS19A

1

1

High-throughput

0.479

High

531616

RL4A
Large ribosomal subunit protein uL4A

1

2

High-throughput

0.479

High

622879

CSK22
Casein kinase II subunit alpha'

1

1

High-throughput

0.479

High

632622

DBP4
ATP-dependent RNA helicase HCA4

1

1

High-throughput

0.479

High

673145

SPB4
ATP-dependent rRNA helicase SPB4

1

1

High-throughput

0.479

High

673152

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

1

High-throughput

0.479

High

673163

RL1D1
Ribosome biogenesis protein UTP30

1

1

High-throughput

0.479

High

673171

CIC1
Proteasome-interacting protein CIC1

1

1

High-throughput

0.479

High

673172

RRP4
Exosome complex component RRP4

1

1

High-throughput

0.479

High

673176

CSK2C
Casein kinase II subunit beta'

1

1

High-throughput

0.479

High

673177

RRP8
25S rRNA

1

1

High-throughput

0.479

High

673196

RRP41
Exosome complex component SKI6

1

2

High-throughput

0.479

High

673204

RL4B
Large ribosomal subunit protein uL4B

1

2

High-throughput

0.479

High

673207

RRP46
Exosome complex component RRP46

1

2

High-throughput

0.479

High

673210

ESF2
Pre-rRNA-processing protein ESF2

1

1

High-throughput

0.479

High

673220

UTP5
U3 small nucleolar RNA-associated protein 5

1

1

High-throughput

0.479

High

673226

FCF1
rRNA-processing protein FCF1

1

2

High-throughput

0.479

High

673227

RRP45
Exosome complex component RRP45

1

2

High-throughput

0.479

High

673243

RRP44
Exosome complex exonuclease DIS3

1

1

High-throughput

0.479

High

673254

RRP42
Exosome complex component RRP42

1

2

High-throughput

0.479

High

673257

NOP56
Nucleolar protein 56

1

1

High-throughput

0.479

High

673259

NOP58
Nucleolar protein 58

1

1

High-throughput

0.479

High

673252

NBP2
NAP1-binding protein 2

1

0

High-throughput

0.460

High

409953

RL25
Large ribosomal subunit protein uL23

1

0

High-throughput

0.458

High

435794

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.458

High

512278

RS6A
Small ribosomal subunit protein eS6A

1

0

High-throughput

0.458

High

514476

RS18A
Small ribosomal subunit protein uS13A

1

0

High-throughput

0.458

High

585211

FBRL
rRNA 2'-O-methyltransferase fibrillarin

1

0

High-throughput

0.458

High

597388

EF3A
Elongation factor 3A

1

0

High-throughput

0.458

High

672851

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

673142

RS2
Small ribosomal subunit protein uS5

1

0

High-throughput

0.458

High

673147

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.458

High

673148

BMH1
Protein BMH1

1

0

High-throughput

0.458

High

673153

RSSA1
Small ribosomal subunit protein uS2A

1

0

High-throughput

0.458

High

673154

MRT4
Ribosome assembly factor MRT4

1

0

Small-scale

0.458

High

673155

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

0

High-throughput

0.458

High

673158

DCA13
Protein SOF1

1

0

High-throughput

0.458

High

673159

UTP11
U3 small nucleolar RNA-associated protein 11

1

0

High-throughput

0.458

High

673161

UTP20
U3 small nucleolar RNA-associated protein 20

1

0

High-throughput

0.458

High

673162

RS27A
Small ribosomal subunit protein eS27A

1

0

High-throughput

0.458

High

673165

GBLP
Small ribosomal subunit protein RACK1

1

0

High-throughput

0.458

High

673173

LRP1
Exosome complex protein LRP1

1

0

High-throughput

0.458

High

673181

NOC2
Nucleolar complex protein 2

1

0

High-throughput

0.458

High

673184

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

0

High-throughput

0.458

High

673187

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

673188

UTP25
U3 small nucleolar RNA-associated protein 25

1

0

High-throughput

0.458

High

673189

FAF1
Protein FAF1

1

0

High-throughput

0.458

High

673191

DIM1
Dimethyladenosine transferase

1

0

High-throughput

0.458

High

673195

ROK1
ATP-dependent RNA helicase ROK1

1

0

High-throughput

0.458

High

673197

MTR4
ATP-dependent RNA helicase DOB1

1

0

High-throughput

0.458

High

673199

NOP9
Nucleolar protein 9

1

0

Small-scale

0.458

High

673200

MPP10
U3 small nucleolar RNA-associated protein MPP10

1

0

High-throughput

0.458

High

673202

MTR3
Exosome complex component MTR3

1

0

High-throughput

0.458

High

673203

RS12
Small ribosomal subunit protein eS12

1

0

High-throughput

0.458

High

673208

PESC
Pescadillo homolog

1

0

High-throughput

0.458

High

673214

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

0

High-throughput

0.458

High

673216

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.458

High

673217

UTP6
U3 small nucleolar RNA-associated protein 6

1

0

High-throughput

0.458

High

673222

UTP15
U3 small nucleolar RNA-associated protein 15

1

0

High-throughput

0.458

High

673231

MRD1
Multiple RNA-binding domain-containing protein 1

1

0

High-throughput

0.458

High

673232

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.458

High

673233

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

0

High-throughput

0.458

High

673234

ESF1
Pre-rRNA-processing protein ESF1

1

0

High-throughput

0.458

High

673241

CMS1
Protein CMS1

1

0

High-throughput

0.458

High

673244

RRP40
Exosome complex component RRP40

1

0

High-throughput

0.458

High

673245

SGO1
Shugoshin

1

0

High-throughput

0.458

High

673246

UTP16
U3 small nucleolar RNA-associated protein 16

1

0

High-throughput

0.458

High

673247

BMS1
Ribosome biogenesis protein BMS1

1

0

High-throughput

0.458

High

673248

FCF2
rRNA-processing protein FCF2

1

0

High-throughput

0.458

High

673249

SAS10
Something about silencing protein 10

1

0

High-throughput

0.458

High

673251

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

673256

DBP10
ATP-dependent RNA helicase DBP10

1

0

High-throughput

0.458

High

673258

RRP36
rRNA biogenesis protein RRP36

1

0

High-throughput

0.458

High

673260

RRP12
Ribosomal RNA-processing protein 12

1

0

High-throughput

0.458

High

673261

EFG1P
rRNA-processing protein EFG1

1

0

High-throughput

0.458

High

673262

NOP14
Nucleolar complex protein 14

1

0

High-throughput

0.458

High

673263

PNO1
Pre-rRNA-processing protein PNO1

1

0

High-throughput

0.458

High

673185

SSB2
Ribosome-associated molecular chaperone SSB2

1

1

High-throughput

0.445

High

504055

RL31A
Large ribosomal subunit protein eL31A

1

1

High-throughput

0.437

High

523167

HSP71
Heat shock protein SSA1

1

0

High-throughput

0.426

High

673164

RPF2
Ribosome biogenesis protein RPF2

1

0

High-throughput

0.426

High

673228

HSP7Q
Iron-sulfur cluster biogenesis chaperone, mitochondrial

1

1

High-throughput

0.407

High

673149

BEM1
Bud emergence protein 1

1

0

High-throughput

0.282

High

673166

BOI1
BEM1-interacting protein 1

1

0

High-throughput

0.282

High

673170

HSE1
Class E vacuolar protein-sorting machinery protein HSE1

1

0

High-throughput

0.282

High

673174

BZZ1
Protein BZZ1

1

0

High-throughput

0.282

High

673183

SHO1
High osmolarity signaling protein SHO1

1

0

High-throughput

0.282

High

673215

PEX13
Peroxisomal membrane protein PEX13

1

0

High-throughput

0.282

High

394274

EF1A
Elongation factor 1-alpha

1

0

High-throughput

0.249

Low

433470

RL26A
Large ribosomal subunit protein uL24A

1

0

High-throughput

0.249

Low

515047

RL19B
Large ribosomal subunit protein eL19

1

0

High-throughput

0.249

Low

673157

RS3A1
Small ribosomal subunit protein eS1A

1

0

High-throughput

0.249

Low

673167

NU170
Nucleoporin NUP170

1

0

High-throughput

0.249

Low

673169

RS20
Small ribosomal subunit protein uS10

1

0

High-throughput

0.249

Low

673205

EIF2A
Eukaryotic translation initiation factor 2A

1

0

High-throughput

0.249

Low

673240

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

673160

ATG19
Autophagy-related protein 19

1

0

High-throughput

0.238

Low

673223

MYO5
Myosin-5

1

0

High-throughput

0.238

Low

673156

HSP78
Heat shock protein 78, mitochondrial

1

0

High-throughput

0.232

Low

673190

SYS1
Protein SYS1

1

0

High-throughput

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025