Protein: UTP7
U3 small nucleolar RNA-associated protein 7 (U3 snoRNA-associated protein 7) (U three protein 7)

Gene: UTP7
Organism: Saccharomyces cerevisiae S288C
Interactions: 170
UniProt ID: P40055

Gene Ontology (top 5):
GO:0000447 - endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462 - maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472 - endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000480 - endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005654 - nucleoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

678395

PWP2
Periodic tryptophan protein 2

7

19

Small-scale

0.962

High

817615

UTP17
NET1-associated nuclear protein 1

5

15

High-throughput

0.930

High

817642

UTP4
U3 small nucleolar RNA-associated protein 4

5

18

Small-scale

0.925

High

817624

DHR1
Probable ATP-dependent RNA helicase DHR1

5

14

Small-scale

0.906

High

817625

UTP15
U3 small nucleolar RNA-associated protein 15

4

18

High-throughput

0.900

High

817631

UTP13
U3 small nucleolar RNA-associated protein 13

4

19

High-throughput

0.900

High

754286

DCA13
Protein SOF1

2

19

High-throughput

0.793

High

817590

MTR4
ATP-dependent RNA helicase DOB1

2

20

Small-scale

0.754

High

817585

UTP10
U3 small nucleolar RNA-associated protein 10

8

2

High-throughput

0.752

High

798227

ENP1
Essential nuclear protein 1

9

1

Small-scale

0.750

High

817592

MPP10
U3 small nucleolar RNA-associated protein MPP10

7

1

Small-scale

0.747

High

817639

RRP9
Ribosomal RNA-processing protein 9

2

19

High-throughput

0.737

High

817608

NAT10
RNA cytidine acetyltransferase

6

1

High-throughput

0.735

High

817599

UTP22
U3 small nucleolar RNA-associated protein 22

5

3

High-throughput

0.720

High

817659

NOP56
Nucleolar protein 56

5

6

High-throughput

0.720

High

677414

KRR1
KRR1 small subunit processome component

5

1

High-throughput

0.716

High

817651

BMS1
Ribosome biogenesis protein BMS1

5

4

High-throughput

0.716

High

817640

NOC4
Nucleolar complex protein 4

5

6

Small-scale

0.702

High

585287

FBRL
rRNA 2'-O-methyltransferase fibrillarin

4

5

High-throughput

0.697

High

817614

UTP6
U3 small nucleolar RNA-associated protein 6

4

2

High-throughput

0.697

High

817632

UTP21
U3 small nucleolar RNA-associated protein 21

4

19

High-throughput

0.697

High

817656

UTP12
U3 small nucleolar RNA-associated protein 12

4

18

High-throughput

0.697

High

381113

H2B1
Histone H2B.1

2

7

High-throughput

0.694

High

817603

UTP8
U3 small nucleolar RNA-associated protein 8

5

0

Small-scale

0.686

High

763571

UTP20
U3 small nucleolar RNA-associated protein 20

4

0

High-throughput

0.667

High

817628

RRP5
rRNA biogenesis protein RRP5

3

14

High-throughput

0.667

High

817611

H3
Histone H3

2

15

High-throughput

0.659

High

817661

NOP58
Nucleolar protein 58

3

6

Small-scale

0.640

High

806525

UTP9
U3 small nucleolar RNA-associated protein 9

3

0

High-throughput

0.638

High

817650

UTP16
U3 small nucleolar RNA-associated protein 16

3

0

High-throughput

0.638

High

817633

MRD1
Multiple RNA-binding domain-containing protein 1

2

3

High-throughput

0.621

High

737633

HIR1
Protein HIR1

1

18

High-throughput

0.618

High

810696

TCPB
T-complex protein 1 subunit beta

1

20

High-throughput

0.618

High

810814

TCPG
T-complex protein 1 subunit gamma

1

20

High-throughput

0.618

High

811094

TCPZ
T-complex protein 1 subunit zeta

1

20

High-throughput

0.618

High

632680

DBP4
ATP-dependent RNA helicase HCA4

1

17

High-throughput

0.618

High

793483

MAK5
ATP-dependent RNA helicase MAK5

1

20

High-throughput

0.618

High

802864

DBP8
ATP-dependent RNA helicase DBP8

1

12

High-throughput

0.618

High

817587

ROK1
ATP-dependent RNA helicase ROK1

1

8

High-throughput

0.618

High

817596

RS12
Small ribosomal subunit protein eS12

1

2

High-throughput

0.618

High

817602

PESC
Pescadillo homolog

1

1

High-throughput

0.618

High

817607

UBP10
Ubiquitin carboxyl-terminal hydrolase 10

1

15

High-throughput

0.618

High

817619

HAS1
ATP-dependent RNA helicase HAS1

1

20

Small-scale

0.618

High

817658

DBP10
ATP-dependent RNA helicase DBP10

1

16

High-throughput

0.618

High

817623

UTP5
U3 small nucleolar RNA-associated protein 5

2

17

High-throughput

0.614

High

817654

SAS10
Something about silencing protein 10

2

3

High-throughput

0.614

High

817663

RRP12
Ribosomal RNA-processing protein 12

2

2

High-throughput

0.611

High

817666

NOP14
Nucleolar complex protein 14

2

1

High-throughput

0.611

High

427300

RLA0
Large ribosomal subunit protein uL10

2

3

High-throughput

0.601

High

817578

UTP18
U3 small nucleolar RNA-associated protein 18

1

0

High-throughput

0.586

High

817581

FAF1
Protein FAF1

2

0

Small-scale

0.585

High

673182

RRP7
Ribosomal RNA-processing protein 7

2

2

High-throughput

0.584

High

817606

CSL4
Exosome complex component CSL4

2

1

High-throughput

0.584

High

817627

UTP14
U3 small nucleolar RNA-associated protein 14

2

3

High-throughput

0.584

High

817655

RRP6
Exosome complex exonuclease RRP6

2

4

High-throughput

0.584

High

626756

HSP60
Heat shock protein 60, mitochondrial

1

20

High-throughput

0.578

High

810950

TCPD
T-complex protein 1 subunit delta

1

20

High-throughput

0.578

High

817584

TCPH
T-complex protein 1 subunit eta

1

20

High-throughput

0.578

High

531756

RL4A
Large ribosomal subunit protein uL4A

2

2

High-throughput

0.574

High

817582

MPH1
ATP-dependent DNA helicase MPH1

1

13

Small-scale

0.555

High

585946

CSK21
Casein kinase II subunit alpha

1

16

High-throughput

0.541

High

817586

CSK2B
Casein kinase II subunit beta

1

1

High-throughput

0.541

High

817604

PXR1
Protein PXR1

1

1

High-throughput

0.541

High

709388

HRR25
Casein kinase I homolog HRR25

1

6

Small-scale

0.536

High

816154

DPO5
rDNA transcriptional regulator POL5

1

1

High-throughput

0.536

High

817647

BRX1
Ribosome biogenesis protein BRX1

1

7

High-throughput

0.536

High

524079

HSP71
Heat shock protein SSA1

2

11

High-throughput

0.533

High

817612

CDC14
Tyrosine-protein phosphatase CDC14

1

7

Small-scale

0.515

High

382123

H4
Histone H4

1

8

High-throughput

0.514

High

419748

H2A2
Histone H2A.2

1

7

High-throughput

0.514

High

817662

H2AZ
Histone H2A.Z

1

6

High-throughput

0.514

High

518035

SSBP1
Single-stranded nucleic acid-binding protein

1

8

High-throughput

0.500

High

817589

NET1
Nucleolar protein NET1

1

0

Small-scale

0.493

High

664299

SSD1
Protein SSD1

1

4

High-throughput

0.489

High

699408

CIN8
Kinesin-like protein CIN8

1

14

High-throughput

0.489

High

815130

IF4F1
Eukaryotic initiation factor 4F subunit p150

1

3

High-throughput

0.489

High

817577

SSB2
Ribosome-associated molecular chaperone SSB2

1

12

High-throughput

0.489

High

817622

RUVB1
RuvB-like protein 1

1

3

High-throughput

0.489

High

704608

SBA1
Co-chaperone protein SBA1

1

1

Small-scale

0.481

High

435124

RS3
Small ribosomal subunit protein uS3

1

4

High-throughput

0.479

High

513033

RS8A
Small ribosomal subunit protein eS8A

1

2

High-throughput

0.479

High

514660

RS18A
Small ribosomal subunit protein uS13A

1

1

High-throughput

0.479

High

670763

SIS1
Protein SIS1

1

5

High-throughput

0.479

High

674652

RS2
Small ribosomal subunit protein uS5

1

1

High-throughput

0.479

High

747017

IMP3
U3 small nucleolar ribonucleoprotein protein IMP3

1

3

High-throughput

0.479

High

753396

RS3A1
Small ribosomal subunit protein eS1A

1

2

High-throughput

0.479

High

778355

RS27A
Small ribosomal subunit protein eS27A

1

1

High-throughput

0.479

High

782068

RL1D1
Ribosome biogenesis protein UTP30

1

3

High-throughput

0.479

High

804715

RRP4
Exosome complex component RRP4

1

9

High-throughput

0.479

High

808278

RRP8
25S rRNA

1

3

High-throughput

0.479

High

817576

LCP5
U3 small nucleolar ribonucleoprotein protein LCP5

1

2

High-throughput

0.479

High

817588

RRP41
Exosome complex component SKI6

1

10

High-throughput

0.479

High

817594

NOL10
Ribosome biogenesis protein ENP2

1

3

High-throughput

0.479

High

817600

RRP46
Exosome complex component RRP46

1

8

High-throughput

0.479

High

817605

ESF2
Pre-rRNA-processing protein ESF2

1

1

High-throughput

0.479

High

817610

IMP4
U3 small nucleolar ribonucleoprotein protein IMP4

1

5

High-throughput

0.479

High

817617

TOM1
E3 ubiquitin-protein ligase TOM1

1

5

High-throughput

0.479

High

817630

RRP45
Exosome complex component RRP45

1

6

High-throughput

0.479

High

817634

SGD1
Suppressor of glycerol defect protein 1

1

5

High-throughput

0.479

High

817641

BFR2
Protein BFR2

1

3

High-throughput

0.479

High

817646

RRP44
Exosome complex exonuclease DIS3

1

4

High-throughput

0.479

High

817648

RRP40
Exosome complex component RRP40

1

2

High-throughput

0.479

High

817652

FCF2
rRNA-processing protein FCF2

1

1

High-throughput

0.479

High

817657

RRP42
Exosome complex component RRP42

1

6

High-throughput

0.479

High

672892

RRP43
Exosome complex component RRP43

1

0

High-throughput

0.458

High

735000

RPC3
DNA-directed RNA polymerase III subunit RPC3

1

0

High-throughput

0.458

High

758373

UTP11
U3 small nucleolar RNA-associated protein 11

1

0

High-throughput

0.458

High

804929

LRP1
Exosome complex protein LRP1

1

0

High-throughput

0.458

High

817579

RRT14
Regulator of rDNA transcription protein 14

1

0

High-throughput

0.458

High

817580

UTP25
U3 small nucleolar RNA-associated protein 25

1

0

High-throughput

0.458

High

817591

NOP9
Nucleolar protein 9

1

0

Small-scale

0.458

High

817595

MTR3
Exosome complex component MTR3

1

0

High-throughput

0.458

High

817629

FCF1
rRNA-processing protein FCF1

1

0

High-throughput

0.458

High

817637

NEP1
Ribosomal RNA small subunit methyltransferase NEP1

1

0

High-throughput

0.458

High

817638

ESF1
Pre-rRNA-processing protein ESF1

1

0

High-throughput

0.458

High

817644

CMS1
Protein CMS1

1

0

High-throughput

0.458

High

817645

RCL1
rRNA processing protein RCL1

1

0

High-throughput

0.458

High

817660

RRP36
rRNA biogenesis protein RRP36

1

0

High-throughput

0.458

High

817664

EFG1P
rRNA-processing protein EFG1

1

0

High-throughput

0.458

High

817667

PNO1
Pre-rRNA-processing protein PNO1

1

0

High-throughput

0.458

High

509572

UBI4P
Polyubiquitin [Cleaved into: Ubiquitin]

1

11

High-throughput

0.457

High

599366

FUS3
Mitogen-activated protein kinase FUS3

1

3

High-throughput

0.457

High

602480

PHO85
Cyclin-dependent protein kinase PHO85

1

7

High-throughput

0.457

High

656484

KC11
Casein kinase I homolog 1

1

7

High-throughput

0.457

High

656786

KC12
Casein kinase I homolog 2

1

7

High-throughput

0.457

High

817618

STE20
Serine/threonine-protein kinase STE20

1

3

Small-scale

0.457

High

403527

PABP
Polyadenylate-binding protein, cytoplasmic and nuclear

1

7

High-throughput

0.457

High

531334

METK1
S-adenosylmethionine synthase 1

1

1

High-throughput

0.457

High

599028

PFKA2
ATP-dependent 6-phosphofructokinase subunit beta

1

3

High-throughput

0.457

High

645433

XRN1
5'-3' exoribonuclease 1

1

4

High-throughput

0.457

High

676934

SRO9
RNA-binding protein SRO9

1

8

High-throughput

0.457

High

743220

PP12
Serine/threonine-protein phosphatase PP1-2

1

6

High-throughput

0.445

High

807079

FKBP3
Peptidyl-prolyl cis-trans isomerase

1

6

High-throughput

0.445

High

817636

FKBP4
FK506-binding protein 4

1

5

High-throughput

0.445

High

436428

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

3

High-throughput

0.437

High

455090

RS19A
Small ribosomal subunit protein eS19A

1

1

High-throughput

0.437

High

503069

RS22A
Small ribosomal subunit protein uS8A

1

2

High-throughput

0.437

High

679734

CDC48
Cell division control protein 48

1

5

High-throughput

0.437

High

709789

BMH1
Protein BMH1

1

2

High-throughput

0.437

High

817256

ARB1
ABC transporter ATP-binding protein ARB1

1

1

Small-scale

0.437

High

817598

EIF2A
Eukaryotic translation initiation factor 2A

1

1

High-throughput

0.437

High

817601

GYP2
GTPase-activating protein GYP2

1

3

High-throughput

0.437

High

817609

APJ1
J domain-containing protein APJ1

1

6

High-throughput

0.437

High

817626

VMS1
tRNA endonuclease VMS1

1

1

High-throughput

0.437

High

817653

MLH3
DNA mismatch repair protein MLH3

1

1

High-throughput

0.437

High

817665

RS22B
Small ribosomal subunit protein uS8B

1

2

High-throughput

0.437

High

394600

EF1A
Elongation factor 1-alpha

1

2

High-throughput

0.407

High

450595

FAS1
Fatty acid synthase subunit beta

1

3

High-throughput

0.407

High

545031

SSB1
Ribosome-associated molecular chaperone SSB1

1

12

High-throughput

0.407

High

817616

HOS3
Histone deacetylase HOS3

1

20

High-throughput

0.407

High

817575

SHO1
High osmolarity signaling protein SHO1

2

0

High-throughput

0.323

High

817583

DSN1
Kinetochore-associated protein DSN1

2

0

High-throughput

0.305

High

449417

SPT2
Protein SPT2

1

0

High-throughput

0.279

Low

454450

PHO4
Phosphate system positive regulatory protein PHO4

1

0

High-throughput

0.279

Low

676810

BUD3
Bud site selection protein 3

1

0

High-throughput

0.279

Low

775968

TCTP
Translationally-controlled tumor protein homolog

1

0

High-throughput

0.279

Low

817597

MNP1
Large ribosomal subunit protein bL12m

1

0

High-throughput

0.279

Low

817620

CLU
Clustered mitochondria protein 1

1

0

High-throughput

0.279

Low

797336

INCE
Inner centromere protein SLI15

1

0

Small-scale

0.269

Low

817593

BIR1
Chromosomal passenger complex protein BIR1

1

0

Small-scale

0.269

Low

441145

KAPA
cAMP-dependent protein kinase type 1

1

0

High-throughput

0.261

Low

707214

TF2B
Transcription initiation factor IIB

1

0

High-throughput

0.249

Low

747882

SMY2
Protein SMY2

1

0

High-throughput

0.249

Low

804843

NMD2
Nonsense-mediated mRNA decay protein 2

1

0

Small-scale

0.249

Low

812337

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

817613

RS15
Small ribosomal subunit protein uS19

1

0

High-throughput

0.249

Low

817621

BUL2
Ubiquitin ligase-binding protein BUL2

1

0

Small-scale

0.249

Low

817635

MMS22
E3 ubiquitin-protein ligase substrate receptor MMS22

1

0

High-throughput

0.249

Low

817643

VAM6
Vacuolar morphogenesis protein 6

1

0

High-throughput

0.249

Low

817649

SGO1
Shugoshin

1

0

High-throughput

0.249

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025