Protein: DEAD
ATP-dependent RNA helicase DeaD (EC 3.6.4.13) (Cold-shock DEAD box protein A) (Translation factor W2)

Gene: DEAD
Organism: Escherichia coli K-12
Interactions: 100
UniProt ID: P0A9P6

Gene Ontology (top 5):
GO:0003724 - RNA helicase activity
GO:0005524 - ATP binding
GO:0005829 - cytosol
GO:0005840 - ribosome
GO:0006401 - RNA catabolic process

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

465153

SRMB
ATP-dependent RNA helicase SrmB

2

18

High-throughput

0.759

High

465162

HRPA
ATP-dependent RNA helicase HrpA

2

6

High-throughput

0.759

High

465118

DEAD
ATP-dependent RNA helicase DeaD

1

16

High-throughput

0.698

High

465154

RNE
Ribonuclease E

3

1

Small-scale

0.634

High

460747

RL1
Large ribosomal subunit protein uL1

1

2

High-throughput

0.625

High

465136

GYRB
DNA gyrase subunit B

1

0

High-throughput

0.593

High

457338

ACP
Acyl carrier protein

2

1

High-throughput

0.588

High

460954

RL28
Large ribosomal subunit protein bL28

2

1

High-throughput

0.588

High

461354

RS11
Small ribosomal subunit protein uS11

2

5

High-throughput

0.588

High

461617

RS19
Small ribosomal subunit protein uS19

2

5

High-throughput

0.588

High

464297

CSPD
Cold shock-like protein CspD

2

16

High-throughput

0.588

High

465127

DBHB
DNA-binding protein HU-beta

2

3

High-throughput

0.588

High

465144

RL6
Large ribosomal subunit protein uL6

2

2

High-throughput

0.588

High

465155

PSS
CDP-diacylglycerol--serine O-phosphatidyltransferase

1

0

High-throughput

0.586

High

465123

YBCJ
Putative RNA-binding protein YbcJ

2

0

High-throughput

0.576

High

460474

RL11
Large ribosomal subunit protein uL11

2

0

High-throughput

0.563

High

462929

TGT
Queuine tRNA-ribosyltransferase

2

0

High-throughput

0.563

High

463262

YBAB
Nucleoid-associated protein YbaB

2

0

High-throughput

0.563

High

465139

NUSG
Transcription termination/antitermination protein NusG

2

0

High-throughput

0.563

High

465142

RL17
Large ribosomal subunit protein bL17

2

0

High-throughput

0.563

High

465151

RL18
Large ribosomal subunit protein uL18

2

0

High-throughput

0.563

High

465159

RLMN
Dual-specificity RNA methyltransferase RlmN

2

0

High-throughput

0.563

High

465169

RS21
Small ribosomal subunit protein bS21

2

0

High-throughput

0.563

High

465130

RL16
Large ribosomal subunit protein uL16

2

1

High-throughput

0.537

High

465147

RS1
Small ribosomal subunit protein bS1

2

6

High-throughput

0.537

High

465158

CBPA
Curved DNA-binding protein

2

2

High-throughput

0.537

High

357041

RS7
Small ribosomal subunit protein uS7

1

3

High-throughput

0.484

High

442675

DNAJ
Chaperone protein DnaJ

1

3

High-throughput

0.484

High

461267

RS10
Small ribosomal subunit protein uS10

1

7

High-throughput

0.484

High

461415

RS13
Small ribosomal subunit protein uS13

1

5

High-throughput

0.484

High

461581

RS18
Small ribosomal subunit protein bS18

1

1

High-throughput

0.484

High

461920

RS3
Small ribosomal subunit protein uS3

1

6

High-throughput

0.484

High

462101

RS4
Small ribosomal subunit protein uS4

1

1

High-throughput

0.484

High

462300

RS5
Small ribosomal subunit protein uS5

1

8

High-throughput

0.484

High

462418

RS8
Small ribosomal subunit protein uS8

1

6

High-throughput

0.484

High

462464

RS9
Small ribosomal subunit protein uS9

1

5

High-throughput

0.484

High

465119

CSPA
Cold shock protein CspA

1

16

High-throughput

0.484

High

465120

CSPC
Cold shock-like protein CspC

1

16

High-throughput

0.484

High

465121

RL13
Large ribosomal subunit protein uL13

1

5

High-throughput

0.484

High

465122

RLUC
Ribosomal large subunit pseudouridine synthase C

1

2

High-throughput

0.484

High

465126

DBHA
DNA-binding protein HU-alpha

1

3

High-throughput

0.484

High

465133

MAP1
Methionine aminopeptidase

1

1

High-throughput

0.484

High

465152

RNR
Ribonuclease R

1

4

High-throughput

0.484

High

465161

RLUB
Ribosomal large subunit pseudouridine synthase B

1

2

High-throughput

0.484

High

465163

RL2
Large ribosomal subunit protein uL2

1

6

High-throughput

0.484

High

465164

RL3
Large ribosomal subunit protein uL3

1

4

High-throughput

0.484

High

465166

RL4
Large ribosomal subunit protein uL4

1

2

High-throughput

0.484

High

465167

RL22
Large ribosomal subunit protein uL22

1

6

High-throughput

0.484

High

465176

SUFC
Probable ATP-dependent transporter SufC

1

1

High-throughput

0.484

High

393736

PNP
Polyribonucleotide nucleotidyltransferase

1

5

High-throughput

0.479

High

429395

FDHF
Formate dehydrogenase H

1

1

High-throughput

0.479

High

464324

CSPE
Cold shock-like protein CspE

1

16

High-throughput

0.479

High

465168

RL5
Large ribosomal subunit protein uL5

1

3

High-throughput

0.479

High

356935

RS6
Small ribosomal subunit protein bS6

1

0

High-throughput

0.464

High

458687

FABA
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase

1

0

High-throughput

0.464

High

458919

HFQ
RNA-binding protein Hfq

1

0

High-throughput

0.464

High

460175

HSLV
ATP-dependent protease subunit HslV

1

0

High-throughput

0.464

High

460633

RL19
Large ribosomal subunit protein bL19

1

0

High-throughput

0.464

High

461188

RL9
Large ribosomal subunit protein bL9

1

0

High-throughput

0.464

High

461659

RS20
Small ribosomal subunit protein bS20

1

0

High-throughput

0.464

High

464763

PHOL
PhoH-like protein

1

0

High-throughput

0.464

High

465124

ACCA
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha

1

0

High-throughput

0.464

High

465128

EVGA
DNA-binding transcriptional activator EvgA

1

0

High-throughput

0.464

High

465132

RS15
Small ribosomal subunit protein uS15

1

0

High-throughput

0.464

High

465134

DACA
D-alanyl-D-alanine carboxypeptidase DacA

1

0

High-throughput

0.464

High

465137

INGK
Guanosine-inosine kinase

1

0

High-throughput

0.464

High

465140

ODP1
Pyruvate dehydrogenase E1 component

1

0

High-throughput

0.464

High

465141

SPOT
Bifunctional

1

0

High-throughput

0.464

High

465143

RL21
Large ribosomal subunit protein bL21

1

0

High-throughput

0.464

High

465148

SUCD
Succinate--CoA ligase [ADP-forming] subunit alpha

1

0

High-throughput

0.464

High

465149

YFIF
Uncharacterized tRNA/rRNA methyltransferase YfiF

1

0

High-throughput

0.464

High

465150

URAA
Uracil permease

1

0

High-throughput

0.464

High

465160

RLMJ
Ribosomal RNA large subunit methyltransferase J

1

0

High-throughput

0.464

High

465165

RL24
Large ribosomal subunit protein uL24

1

0

High-throughput

0.464

High

465177

BGLA
6-phospho-beta-glucosidase BglA

1

0

High-throughput

0.464

High

460870

RL20
Large ribosomal subunit protein bL20

1

0

High-throughput

0.458

High

464011

YFBU
UPF0304 protein YfbU

1

0

High-throughput

0.458

High

465129

YIBL
Uncharacterized protein YibL

1

0

High-throughput

0.458

High

465138

RRAB
Regulator of ribonuclease activity B

1

0

High-throughput

0.458

High

465170

CSRA
Carbon storage regulator

1

0

High-throughput

0.458

High

461518

RS16
Small ribosomal subunit protein bS16

1

1

High-throughput

0.442

High

461754

RS2
Small ribosomal subunit protein uS2

1

9

High-throughput

0.442

High

465146

RS17
Small ribosomal subunit protein uS17

1

4

High-throughput

0.437

High

465175

YNFE
Putative dimethyl sulfoxide reductase chain YnfE

1

1

High-throughput

0.437

High

459976

RPPH
RNA pyrophosphohydrolase

2

0

High-throughput

0.307

High

460912

RL27
Large ribosomal subunit protein bL27

2

0

High-throughput

0.307

High

462605

RNPA
Ribonuclease P protein component

2

0

High-throughput

0.307

High

463479

TRMB
tRNA

2

0

High-throughput

0.307

High

465125

DPS
DNA protection during starvation protein

2

0

High-throughput

0.307

High

465131

RL23
Large ribosomal subunit protein uL23

2

0

High-throughput

0.307

High

465171

HCP
Hydroxylamine reductase

2

0

High-throughput

0.307

High

465135

DPPC
Dipeptide transport system permease protein DppC

1

0

High-throughput

0.253

Low

465145

RS14
Small ribosomal subunit protein uS14

1

0

High-throughput

0.253

Low

465156

3PASE
Inorganic triphosphatase

1

0

High-throughput

0.253

Low

465157

SQASE
Sulfoquinovosidase

1

0

High-throughput

0.253

Low

465172

RLMKL
Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase

1

0

High-throughput

0.253

Low

465174

SIXA
Phosphohistidine phosphatase SixA

1

0

High-throughput

0.253

Low

358376

RL15
Large ribosomal subunit protein uL15

1

0

High-throughput

0.249

Low

465173

YNCE
Uncharacterized protein YncE

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024