Protein: LSM3
U6 snRNA-associated Sm-like protein LSm3

Gene: LSM3
Organism: Homo sapiens
Interactions: 110
UniProt ID: P62310

Gene Ontology (top 5):
GO:0000398 - mRNA splicing, via spliceosome
GO:0000932 - P-body
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

912205

LSM2
U6 snRNA-associated Sm-like protein LSm2

16

20

Small-scale

0.990

High

167680

LSM1
U6 snRNA-associated Sm-like protein LSm1

7

20

High-throughput

0.971

High

912139

LSM6
U6 snRNA-associated Sm-like protein LSm6

6

20

High-throughput

0.956

High

867407

ICLN
Methylosome subunit pICln

5

6

High-throughput

0.935

High

912210

LSM5
U6 snRNA-associated Sm-like protein LSm5

5

20

High-throughput

0.931

High

912202

LSM7
U6 snRNA-associated Sm-like protein LSm7

5

20

High-throughput

0.928

High

912173

LSM10
U7 snRNA-associated Sm-like protein LSm10

4

20

High-throughput

0.912

High

321387

LSM8
U6 snRNA-associated Sm-like protein LSm8

4

20

High-throughput

0.904

High

912142

SMD3
Small nuclear ribonucleoprotein Sm D3

4

20

High-throughput

0.894

High

912211

LSM4
U6 snRNA-associated Sm-like protein LSm4

4

20

Small-scale

0.886

High

911791

RUXF
Small nuclear ribonucleoprotein F

3

20

High-throughput

0.858

High

202406

PRPF3
U4/U6 small nuclear ribonucleoprotein Prp3

2

8

High-throughput

0.811

High

912158

SART3
Squamous cell carcinoma antigen recognized by T-cells 3

2

20

High-throughput

0.811

High

911607

RUXE
Small nuclear ribonucleoprotein E

2

9

High-throughput

0.806

High

912020

RUXG
Small nuclear ribonucleoprotein G

2

20

High-throughput

0.806

High

912140

SMD1
Small nuclear ribonucleoprotein Sm D1

2

20

High-throughput

0.806

High

912145

EF1A1
Elongation factor 1-alpha 1

1

1

High-throughput

0.698

High

538892

RSMB
Small nuclear ribonucleoprotein-associated proteins B and B'

1

14

High-throughput

0.691

High

912141

SMD2
Small nuclear ribonucleoprotein Sm D2

1

16

High-throughput

0.691

High

912163

PATL1
Protein PAT1 homolog 1

1

6

High-throughput

0.691

High

880292

TCL1A
T-cell leukemia/lymphoma protein 1A

3

2

High-throughput

0.675

High

912155

KEAP1
Kelch-like ECH-associated protein 1

3

3

High-throughput

0.675

High

912162

MEPCE
7SK snRNA methylphosphate capping enzyme

3

6

High-throughput

0.656

High

912199

TFP11
Tuftelin-interacting protein 11

2

10

High-throughput

0.639

High

912166

ZGPAT
Zinc finger CCCH-type with G patch domain-containing protein

2

10

Small-scale

0.611

High

912147

INCA1
Protein INCA1

2

1

High-throughput

0.606

High

912159

LSM12
Protein LSM12

2

1

High-throughput

0.606

High

912183

NACC1
Nucleus accumbens-associated protein 1

2

4

High-throughput

0.606

High

912144

YBOX1
Y-box-binding protein 1

2

4

Small-scale

0.600

High

483302

TPC2B
Trafficking protein particle complex subunit 2B

2

1

High-throughput

0.586

High

912160

LARP7
La-related protein 7

2

10

High-throughput

0.584

High

912180

AP4AT
AP-4 complex accessory subunit Tepsin

2

0

High-throughput

0.580

High

369324

ESR1
Estrogen receptor

2

4

High-throughput

0.571

High

912175

DDT4L
DNA damage-inducible transcript 4-like protein

2

2

High-throughput

0.553

High

912172

DLX4
Homeobox protein DLX-4

1

1

High-throughput

0.541

High

196990

PRP4
U4/U6 small nuclear ribonucleoprotein Prp4

1

15

High-throughput

0.536

High

199703

SNUT1
U4/U6.U5 tri-snRNP-associated protein 1

1

5

High-throughput

0.536

High

300101

PRP6
Pre-mRNA-processing factor 6

1

18

High-throughput

0.536

High

817878

SOX2
Transcription factor SOX-2

1

5

High-throughput

0.536

High

878291

NH2L1
NHP2-like protein 1

1

5

High-throughput

0.536

High

912153

BACD2
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2

1

2

High-throughput

0.536

High

912156

BECN1
Beclin-1

1

1

High-throughput

0.536

High

912167

ZN511
Zinc finger protein 511

1

2

High-throughput

0.536

High

912169

PRP31
U4/U6 small nuclear ribonucleoprotein Prp31

1

7

High-throughput

0.536

High

912170

BACD1
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1

1

2

High-throughput

0.536

High

912189

NSD3
Histone-lysine N-methyltransferase NSD3

1

3

High-throughput

0.536

High

912191

BACD3
BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3

1

2

High-throughput

0.536

High

912192

STPAP
Speckle targeted PIP5K1A-regulated poly(A) polymerase

1

6

High-throughput

0.536

High

912194

COPRS
Coordinator of PRMT5 and differentiation stimulator

1

2

High-throughput

0.536

High

912209

FARP1
FERM, ARHGEF and pleckstrin domain-containing protein 1

1

5

High-throughput

0.536

High

912212

PAXB1
PAX3- and PAX7-binding protein 1

1

3

High-throughput

0.536

High

388358

HSPB1
Heat shock protein beta-1

1

0

High-throughput

0.518

High

439280

GSTA1
Glutathione S-transferase A1

1

0

High-throughput

0.518

High

912187

UT14A
U3 small nucleolar RNA-associated protein 14 homolog A

1

0

High-throughput

0.518

High

483242

TPC2A
Trafficking protein particle complex subunit 2

1

1

High-throughput

0.515

High

814366

AL1A3
Retinaldehyde dehydrogenase 3

1

0

High-throughput

0.513

High

829105

PCY1A
Choline-phosphate cytidylyltransferase A

1

0

High-throughput

0.513

High

912161

INT3
Integrator complex subunit 3

1

0

High-throughput

0.513

High

912188

DPCD
Protein DPCD

1

0

High-throughput

0.513

High

912204

RUVB1
RuvB-like 1

1

0

High-throughput

0.513

High

912150

SF3B2
Splicing factor 3B subunit 2

1

5

High-throughput

0.508

High

912152

THOC5
THO complex subunit 5 homolog

1

1

High-throughput

0.508

High

912185

MEP50
Methylosome protein WDR77

1

12

High-throughput

0.508

High

912186

WDR83
WD repeat domain-containing protein 83

1

13

High-throughput

0.508

High

912190

XRN2
5'-3' exoribonuclease 2

1

2

High-throughput

0.508

High

912182

BTBD9
BTB/POZ domain-containing protein 9

1

4

High-throughput

0.489

High

912146

XPC
DNA repair protein complementing XP-C cells

1

0

High-throughput

0.486

High

673138

CCND3
G1/S-specific cyclin-D3

1

1

High-throughput

0.481

High

877468

CDN2D
Cyclin-dependent kinase 4 inhibitor D

1

1

High-throughput

0.481

High

912181

QKI
KH domain-containing RNA-binding protein QKI

1

4

High-throughput

0.481

High

912195

EXOS5
Exosome complex component RRP46

1

5

High-throughput

0.481

High

912196

SHLB2
Endophilin-B2

1

1

High-throughput

0.481

High

294638

RECQ4
ATP-dependent DNA helicase Q4

1

6

High-throughput

0.479

High

298370

UFL1
E3 UFM1-protein ligase 1

1

2

High-throughput

0.479

High

779171

CCNF
Cyclin-F

1

1

High-throughput

0.479

High

912143

H4
Histone H4

1

5

High-throughput

0.479

High

912148

TP53B
TP53-binding protein 1

1

5

High-throughput

0.479

High

912149

G3BP1
Ras GTPase-activating protein-binding protein 1

1

1

High-throughput

0.479

High

912157

RBM39
RNA-binding protein 39

1

7

High-throughput

0.479

High

912164

ZCH18
Zinc finger CCCH domain-containing protein 18

1

10

High-throughput

0.479

High

912168

LS14A
Protein LSM14 homolog A

1

5

Small-scale

0.479

High

912171

ESR2
Estrogen receptor beta

1

4

High-throughput

0.479

High

912179

SNX27
Sorting nexin-27

1

3

High-throughput

0.479

High

912193

RC3H2
Roquin-2

1

8

High-throughput

0.479

High

912198

AKA7G
A-kinase anchor protein 7 isoform gamma

1

10

High-throughput

0.479

High

912200

ZRAN1
Ubiquitin thioesterase ZRANB1

1

4

High-throughput

0.479

High

912203

FZR1
Fizzy-related protein homolog

1

8

High-throughput

0.479

High

912207

TRRAP
Transformation/transcription domain-associated protein

1

1

High-throughput

0.479

High

912208

UBP15
Ubiquitin carboxyl-terminal hydrolase 15

1

3

Small-scale

0.479

High

278029

PIAS1
E3 SUMO-protein ligase PIAS1

1

0

High-throughput

0.460

High

884123

KLF3
Krueppel-like factor 3

1

0

High-throughput

0.460

High

912151

4EBP2
Eukaryotic translation initiation factor 4E-binding protein 2

1

0

High-throughput

0.460

High

912201

CNOT7
CCR4-NOT transcription complex subunit 7

1

0

High-throughput

0.460

High

912206

EXOS1
Exosome complex component CSL4

1

0

High-throughput

0.460

High

912165

CEP57
Centrosomal protein of 57 kDa

1

0

High-throughput

0.458

High

912197

HAUS2
HAUS augmin-like complex subunit 2

1

0

High-throughput

0.458

High

412118

FYN
Tyrosine-protein kinase Fyn

1

3

High-throughput

0.457

High

3536

NBDY
Negative regulator of P-body association

1

1

Small-scale

0.445

High

496747

TAU
Microtubule-associated protein tau

1

5

High-throughput

0.445

High

400025

ICAM1
Intercellular adhesion molecule 1

1

3

High-throughput

0.437

High

530574

ITA4
Integrin alpha-4

1

1

High-throughput

0.437

High

912174

IGSF8
Immunoglobulin superfamily member 8

1

2

High-throughput

0.437

High

912178

DDRGK
DDRGK domain-containing protein 1

1

3

High-throughput

0.437

High

912176

OTUB1
Ubiquitin thioesterase OTUB1

1

0

High-throughput

0.426

High

912184

NUDC1
NudC domain-containing protein 1

1

0

High-throughput

0.426

High

211299

AKA7A
A-kinase anchor protein 7 isoforms alpha and beta

1

10

High-throughput

0.407

High

581622

VCAM1
Vascular cell adhesion protein 1

1

1

High-throughput

0.407

High

912177

CEP95
Centrosomal protein of 95 kDa

2

0

High-throughput

0.326

High

233934

GDF9
Growth/differentiation factor 9

1

0

High-throughput

0.282

High

912154

CAC1C
Voltage-dependent L-type calcium channel subunit alpha-1C

1

0

High-throughput

0.232

Low


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Last updated: 15 Jul 2024