Protein: LIN9
Protein lin-9 homolog (HuLin-9) (hLin-9) (Beta subunit-associated regulator of apoptosis) (TUDOR gene similar protein) (Type I interferon receptor beta chain-associated protein) (pRB-associated protein)

Gene: LIN9
Organism: Homo sapiens
Interactions: 113
UniProt ID: Q5TKA1

Gene Ontology (top 5):
GO:0003677 - DNA binding
GO:0005654 - nucleoplasm
GO:0006351 - DNA-templated transcription
GO:0006357 - regulation of transcription by RNA polymerase II
GO:0017053 - transcription repressor complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1066346

RBBP4
Histone-binding protein RBBP4

10

5

Small-scale

0.975

High

1216618

LIN37
Protein lin-37 homolog

8

2

Small-scale

0.966

High

1197989

LIN52
Protein lin-52 homolog

5

1

Small-scale

0.927

High

1158874

RBBP7
Histone-binding protein RBBP7

4

5

High-throughput

0.895

High

519519

MYBB
Myb-related protein B

12

3

Small-scale

0.758

High

1065668

RBL2
Retinoblastoma-like protein 2

6

5

Small-scale

0.732

High

1156741

E2F4
Transcription factor E2F4

5

1

Small-scale

0.716

High

704974

RBL1
Retinoblastoma-like protein 1

5

5

Small-scale

0.709

High

1216605

LIN54
Protein lin-54 homolog

4

4

Small-scale

0.699

High

519449

MYBA
Myb-related protein A

3

3

Small-scale

0.675

High

442745

RB
Retinoblastoma-associated protein

2

5

Small-scale

0.629

High

1122834

TFDP1
Transcription factor Dp-1

2

2

Small-scale

0.628

High

1122884

TFDP2
Transcription factor Dp-2

2

2

Small-scale

0.628

High

285330

EED
Polycomb protein EED

1

0

High-throughput

0.586

High

71452

P20L1
PHD finger protein 20-like protein 1

2

0

High-throughput

0.585

High

1061588

FOXM1
Forkhead box protein M1

2

0

Small-scale

0.585

High

519388

MYB
Transcriptional activator Myb

2

3

Small-scale

0.584

High

1216641

HBS1L
HBS1-like protein

2

1

High-throughput

0.574

High

396292

ESR1
Estrogen receptor

2

2

High-throughput

0.571

High

372259

MYC
Myc proto-oncogene protein

2

0

High-throughput

0.559

High

980835

H2B1C
Histone H2B type 1-C/E/F/G/I

2

0

High-throughput

0.559

High

667905

CDK2
Cyclin-dependent kinase 2

1

0

High-throughput

0.513

High

1150236

TEAD2
Transcriptional enhancer factor TEF-4

1

0

High-throughput

0.513

High

1216643

MTL5
Tesmin

1

4

High-throughput

0.489

High

143042

NFIB
Nuclear factor 1 B-type

1

3

High-throughput

0.479

High

210018

CRX
Cone-rod homeobox protein

1

2

High-throughput

0.479

High

210295

PHF1
PHD finger protein 1

1

1

High-throughput

0.479

High

243659

SMCA5
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5

1

4

High-throughput

0.479

High

274340

SIN3B
Paired amphipathic helix protein Sin3b

1

3

High-throughput

0.479

High

316887

MTA2
Metastasis-associated protein MTA2

1

2

High-throughput

0.479

High

352162

MBD3
Methyl-CpG-binding domain protein 3

1

1

High-throughput

0.479

High

474046

NFIC
Nuclear factor 1 C-type

1

3

High-throughput

0.479

High

520114

ANDR
Androgen receptor

1

2

High-throughput

0.479

High

635194

HNF1A
Hepatocyte nuclear factor 1-alpha

1

1

High-throughput

0.479

High

703335

SMCA1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 1

1

4

High-throughput

0.479

High

775856

HNF1B
Hepatocyte nuclear factor 1-beta

1

2

High-throughput

0.479

High

833964

HNF4A
Hepatocyte nuclear factor 4-alpha

1

1

High-throughput

0.479

High

872419

SOX2
Transcription factor SOX-2

1

1

High-throughput

0.479

High

1086779

BPTF
Nucleosome-remodeling factor subunit BPTF

1

1

High-throughput

0.479

High

1087790

NFIA
Nuclear factor 1 A-type

1

3

High-throughput

0.479

High

1088394

CHD3
Chromodomain-helicase-DNA-binding protein 3

1

4

High-throughput

0.479

High

1102567

MTA1
Metastasis-associated protein MTA1

1

2

High-throughput

0.479

High

1109801

HDAC1
Histone deacetylase 1

1

1

High-throughput

0.479

High

1132753

CHD4
Chromodomain-helicase-DNA-binding protein 4

1

4

High-throughput

0.479

High

1133455

NFIX
Nuclear factor 1 X-type

1

3

High-throughput

0.479

High

1135253

SHPRH
E3 ubiquitin-protein ligase SHPRH

1

5

High-throughput

0.479

High

1155455

EZH2
Histone-lysine N-methyltransferase EZH2

1

2

High-throughput

0.479

High

1216607

P66A
Transcriptional repressor p66-alpha

1

1

High-throughput

0.479

High

1216611

CHD5
Chromodomain-helicase-DNA-binding protein 5

1

4

High-throughput

0.479

High

1216613

ZN296
Zinc finger protein 296

1

2

High-throughput

0.479

High

1216615

P66B
Transcriptional repressor p66-beta

1

1

High-throughput

0.479

High

1216616

HDAC2
Histone deacetylase 2

1

1

High-throughput

0.479

High

1216622

PHF12
PHD finger protein 12

1

4

High-throughput

0.479

High

1216623

CIC
Protein capicua homolog

1

1

High-throughput

0.479

High

1216624

SIN3A
Paired amphipathic helix protein Sin3a

1

3

High-throughput

0.479

High

1216625

MTA3
Metastasis-associated protein MTA3

1

2

High-throughput

0.479

High

1216629

BC11A
BCL11 transcription factor A

1

2

High-throughput

0.479

High

1216630

SDS3
Sin3 histone deacetylase corepressor complex component SDS3

1

1

High-throughput

0.479

High

1216635

MBD2
Methyl-CpG-binding domain protein 2

1

1

High-throughput

0.479

High

1216637

HMGX4
HMG domain-containing protein 4

1

2

High-throughput

0.479

High

1216642

MTF2
Metal-response element-binding transcription factor 2

1

1

High-throughput

0.479

High

155316

CDKA1
Cyclin-dependent kinase 2-associated protein 1

1

0

High-throughput

0.458

High

168267

HAT1
Histone acetyltransferase type B catalytic subunit

1

0

High-throughput

0.458

High

172917

XPO1
Exportin-1

1

0

High-throughput

0.458

High

282267

SAP30
Histone deacetylase complex subunit SAP30

1

0

High-throughput

0.458

High

588890

RFA2
Replication protein A 32 kDa subunit

1

0

High-throughput

0.458

High

675537

TYY1
Transcriptional repressor protein YY1

1

0

High-throughput

0.458

High

685223

PAX6
Paired box protein Pax-6

1

0

High-throughput

0.458

High

851588

GATA4
Transcription factor GATA-4

1

0

High-throughput

0.458

High

886940

CEBPA
CCAAT/enhancer-binding protein alpha

1

0

High-throughput

0.458

High

895733

LHX2
LIM/homeobox protein Lhx2

1

0

High-throughput

0.458

High

920028

PLK1
Serine/threonine-protein kinase PLK1

1

0

High-throughput

0.458

High

979801

H4
Histone H4

1

0

High-throughput

0.458

High

1016929

H33
Histone H3.3

1

0

High-throughput

0.458

High

1094773

CAF1B
Chromatin assembly factor 1 subunit B

1

0

High-throughput

0.458

High

1119561

NFYC
Nuclear transcription factor Y subunit gamma

1

0

High-throughput

0.458

High

1130068

SMC1A
Structural maintenance of chromosomes protein 1A

1

0

High-throughput

0.458

High

1137344

SUZ12
Polycomb protein SUZ12

1

0

High-throughput

0.458

High

1152697

ELF2
ETS-related transcription factor Elf-2

1

0

High-throughput

0.458

High

1195561

ARI4B
AT-rich interactive domain-containing protein 4B

1

0

High-throughput

0.458

High

1216604

LIN9
Protein lin-9 homolog

1

0

Small-scale

0.458

High

1216608

BAP18
BPTF-associated chromatin complex component 1

1

0

High-throughput

0.458

High

1216610

HJURP
Holliday junction recognition protein

1

0

High-throughput

0.458

High

1216614

GATD1
GATA zinc finger domain-containing protein 1

1

0

High-throughput

0.458

High

1216619

Z512B
Zinc finger protein 512B

1

0

High-throughput

0.458

High

1216626

DPY30
Protein dpy-30 homolog

1

0

High-throughput

0.458

High

1216632

TE2IP
Telomeric repeat-binding factor 2-interacting protein 1

1

0

High-throughput

0.458

High

1216634

ZN219
Zinc finger protein 219

1

0

High-throughput

0.458

High

1216638

KLF15
Krueppel-like factor 15

1

0

High-throughput

0.458

High

1208610

BRM1L
Breast cancer metastasis-suppressor 1-like protein

1

1

High-throughput

0.437

High

1216627

BC11B
B-cell lymphoma/leukemia 11B

1

2

High-throughput

0.437

High

1216628

SP130
Histone deacetylase complex subunit SAP130

1

3

High-throughput

0.437

High

168016

RGS13
Regulator of G-protein signaling 13

2

0

High-throughput

0.328

High

335690

MOCS3
Adenylyltransferase and sulfurtransferase MOCS3

2

0

High-throughput

0.328

High

384167

CO1A1
Collagen alpha-1(I) chain

2

0

High-throughput

0.328

High

418196

RPN2
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2

2

0

High-throughput

0.328

High

1135339

SLMAP
Sarcolemmal membrane-associated protein

2

0

High-throughput

0.328

High

1216612

DI3L1
DIS3-like exonuclease 1

2

0

High-throughput

0.328

High

1216620

F167A
Protein FAM167A

2

0

High-throughput

0.328

High

1216640

TCF19
Transcription factor 19

2

0

High-throughput

0.328

High

549608

PRPS2
Ribose-phosphate pyrophosphokinase 2

1

0

High-throughput

0.279

Low

1216609

IFT20
Intraflagellar transport protein 20 homolog

1

0

High-throughput

0.279

Low

1216617

CC74A
Coiled-coil domain-containing protein 74A

1

0

High-throughput

0.279

Low

1216639

PNMA2
Paraneoplastic antigen Ma2

1

0

High-throughput

0.279

Low

1094691

CAF1A
Chromatin assembly factor 1 subunit A

1

0

High-throughput

0.249

Low

1216606

FBX38
F-box only protein 38

1

0

High-throughput

0.249

Low

1216621

PWP2A
PWWP domain-containing protein 2A

1

0

High-throughput

0.249

Low

1216631

RM22
Large ribosomal subunit protein uL22m

1

0

High-throughput

0.249

Low

1216636

ZMYM2
Zinc finger MYM-type protein 2

1

0

High-throughput

0.249

Low

618697

ML12A
Myosin regulatory light chain 12A

1

0

Small-scale

0.232

Low

724585

S10A7
Protein S100-A7

1

0

Small-scale

0.232

Low

1216633

TMOD3
Tropomodulin-3

1

0

Small-scale

0.232

Low


Service provided by Combinatics, Japan

Last updated: 11Aug2025