HitPredict - High confidence protein-protein interactions

Download interactions: TXT MITAB-2.5

Interaction	Interactor	Experiments	Homologs	Category	Interaction Score	Confidence
1157392	PHRF1 PHD and RING finger domain-containing protein 1	3	5	Small-scale	0.770	High
244573	BRD4 Bromodomain-containing protein 4	10	11	Small-scale	0.759	High
1157403	LC7L2 Putative RNA-binding protein Luc7-like 2	5	2	Small-scale	0.716	High
1084491	CPSF6 Cleavage and polyadenylation specificity factor subunit 6	4	8	Small-scale	0.702	High
263682	PR40A Pre-mRNA-processing factor 40 homolog A	4	7	Small-scale	0.694	High
1157368	DIDO1 Death-inducer obliterator 1	1	4	High-throughput	0.691	High
1054383	RBM39 RNA-binding protein 39	4	5	Small-scale	0.691	High
1157359	RSRC1 Serine/Arginine-related protein 53	5	0	Small-scale	0.687	High
963227	U2AF1 Splicing factor U2AF 35 kDa subunit	3	2	High-throughput	0.683	High
1157385	ZCC17 Zinc finger CCHC domain-containing protein 17	3	1	High-throughput	0.683	High
1157341	PR38A Pre-mRNA-splicing factor 38A	4	0	Small-scale	0.675	High
1157374	NAA50 N-alpha-acetyltransferase 50	3	1	High-throughput	0.675	High
834066	CLK3 Dual specificity protein kinase CLK3	3	5	High-throughput	0.675	High
1157337	NKAP NF-kappa-B-activating protein	3	1	High-throughput	0.675	High
1157400	CCNL1 Cyclin-L1	3	2	High-throughput	0.674	High
262485	TULP3 Tubby-related protein 3	3	1	High-throughput	0.667	High
833456	RBM25 RNA-binding protein 25	3	1	Small-scale	0.667	High
984089	SRS11 Serine/arginine-rich splicing factor 11	3	1	Small-scale	0.667	High
1018401	SFSWA Splicing factor, suppressor of white-apricot homolog	3	2	Small-scale	0.667	High
1055395	DHX8 ATP-dependent RNA helicase DHX8	3	7	High-throughput	0.667	High
1077203	U2AFM U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2	3	2	High-throughput	0.667	High
1157330	RBM23 Probable RNA-binding protein 23	3	4	Small-scale	0.667	High
1157333	DHX40 Probable ATP-dependent RNA helicase DHX40	3	7	High-throughput	0.667	High
1157364	CCNL2 Cyclin-L2	3	2	Small-scale	0.667	High
1157382	CLK4 Dual specificity protein kinase CLK4	3	5	Small-scale	0.667	High
1157335	FAM9A Protein FAM9A	3	2	High-throughput	0.664	High
1157398	PUF60 Poly(U)-binding-splicing factor PUF60	3	5	Small-scale	0.662	High
1157321	JMJD6 Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6	1	3	Small-scale	0.647	High
1146412	AR6P4 ADP-ribosylation factor-like protein 6-interacting protein 4	3	0	High-throughput	0.638	High
1148574	CDCA2 Cell division cycle-associated protein 2	3	0	Small-scale	0.638	High
1157329	RSRC2 Arginine/serine-rich coiled-coil protein 2	3	0	Small-scale	0.638	High
1157348	SREK1 Splicing regulatory glutamine/lysine-rich protein 1	3	0	High-throughput	0.638	High
1157375	NSRP1 Nuclear speckle splicing regulatory protein 1	3	0	Small-scale	0.638	High
1157389	ARGL1 Arginine and glutamate-rich protein 1	3	0	High-throughput	0.638	High
1157386	LUC7L Putative RNA-binding protein Luc7-like 1	4	2	Small-scale	0.633	High
165506	SR140 U2 snRNP-associated SURP motif-containing protein	2	2	High-throughput	0.628	High
304630	SCAF4 SR-related and CTD-associated factor 4	2	4	High-throughput	0.628	High
308218	LC7L3 Luc7-like protein 3	2	2	High-throughput	0.628	High
317835	CPSF4 Cleavage and polyadenylation specificity factor subunit 4	2	1	High-throughput	0.628	High
596772	CD11B Cyclin-dependent kinase 11B	2	7	High-throughput	0.628	High
641824	U2AF2 Splicing factor U2AF 65 kDa subunit	2	7	High-throughput	0.628	High
817685	PI42A Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha	2	2	High-throughput	0.628	High
968701	AK17A A-kinase anchor protein 17A	2	1	High-throughput	0.628	High
1135190	RBM26 RNA-binding protein 26	2	3	High-throughput	0.628	High
1157328	DDX46 Probable ATP-dependent RNA helicase DDX46	2	5	High-throughput	0.628	High
1157332	CHERP Calcium homeostasis endoplasmic reticulum protein	2	3	High-throughput	0.628	High
1157338	CPSF7 Cleavage and polyadenylation specificity factor subunit 7	2	3	High-throughput	0.628	High
1157343	WDR48 WD repeat-containing protein 48	2	5	High-throughput	0.628	High
1157347	RN138 E3 ubiquitin-protein ligase RNF138	2	8	High-throughput	0.628	High
1157352	PRP16 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16	2	7	High-throughput	0.628	High
1157360	RNPC3 RNA-binding region-containing protein 3	2	1	High-throughput	0.628	High
1157365	SCAFB Protein SCAF11	2	4	High-throughput	0.628	High
1157369	MMTA2 Multiple myeloma tumor-associated protein 2	2	1	High-throughput	0.628	High
1157373	WDR33 pre-mRNA 3' end processing protein WDR33	2	4	High-throughput	0.628	High
1157377	SFR19 Splicing factor, arginine/serine-rich 19	2	4	High-throughput	0.628	High
1157380	UBP42 Ubiquitin carboxyl-terminal hydrolase 42	2	2	High-throughput	0.628	High
1157394	TFP11 Tuftelin-interacting protein 11	2	1	High-throughput	0.628	High
1157401	SCAF8 SR-related and CTD-associated factor 8	2	1	High-throughput	0.628	High
1157402	ZC3H4 Zinc finger CCCH domain-containing protein 4	2	2	High-throughput	0.628	High
1157404	RBMX2 RNA-binding motif protein, X-linked 2	2	5	High-throughput	0.628	High
1157406	HBS1L HBS1-like protein	2	1	High-throughput	0.628	High
386930	P53 Cellular tumor antigen p53	1	2	Small-scale	0.612	High
1157358	NAF1 H/ACA ribonucleoprotein complex non-core subunit NAF1	2	1	High-throughput	0.611	High
214960	CPSF5 Cleavage and polyadenylation specificity factor subunit 5	2	0	High-throughput	0.602	High
563621	ZNF24 Zinc finger protein 24	2	0	High-throughput	0.602	High
722613	T2FA General transcription factor IIF subunit 1	2	0	High-throughput	0.602	High
1034001	PPIG Peptidyl-prolyl cis-trans isomerase G	2	0	High-throughput	0.602	High
1081206	UAP1 UDP-N-acetylhexosamine pyrophosphorylase	2	0	High-throughput	0.602	High
1131583	ZMYM1 Zinc finger MYM-type protein 1	2	0	High-throughput	0.602	High
1138125	PR38B Pre-mRNA-splicing factor 38B	2	0	High-throughput	0.602	High
1157345	PPIL4 Peptidyl-prolyl cis-trans isomerase-like 4	2	0	High-throughput	0.602	High
1157346	CATIN Splicing factor Cactin	2	0	High-throughput	0.602	High
1157395	IKBL1 NF-kappa-B inhibitor-like protein 1	2	0	High-throughput	0.602	High
1157409	PAXB1 PAX3- and PAX7-binding protein 1	2	0	High-throughput	0.602	High
369823	ESR1 Estrogen receptor	1	15	Small-scale	0.586	High
227788	PRKN E3 ubiquitin-protein ligase parkin	2	3	High-throughput	0.584	High
631471	BRD2 Bromodomain-containing protein 2	2	17	High-throughput	0.584	High
1157327	NKAP1 Uncharacterized protein NKAPD1	2	1	High-throughput	0.574	High
1157362	FRMD6 FERM domain-containing protein 6	1	2	High-throughput	0.573	High
841775	CDK9 Cyclin-dependent kinase 9	1	8	Small-scale	0.561	High
1056426	IRF3 Interferon regulatory factor 3	1	1	Small-scale	0.561	High
1157366	RNF5 E3 ubiquitin-protein ligase RNF5	1	1	Small-scale	0.561	High
201604	MCA3 Eukaryotic translation elongation factor 1 epsilon-1	1	1	High-throughput	0.536	High
225388	MED14 Mediator of RNA polymerase II transcription subunit 14	1	8	High-throughput	0.536	High
508572	TOP1 DNA topoisomerase 1	1	1	High-throughput	0.536	High
559430	H13 Histone H1.3	1	3	High-throughput	0.536	High
577657	SON Protein SON	1	1	High-throughput	0.536	High
720711	RFA3 Replication protein A 14 kDa subunit	1	1	High-throughput	0.536	High
934245	CSK21 Casein kinase II subunit alpha	1	11	High-throughput	0.536	High
960140	CDKL1 Cyclin-dependent kinase-like 1	1	8	High-throughput	0.536	High
1049818	UBP2L Ubiquitin-associated protein 2-like	1	6	High-throughput	0.536	High
1083180	U1SBP U11/U12 small nuclear ribonucleoprotein 35 kDa protein	1	5	High-throughput	0.536	High
1157367	BUD13 BUD13 homolog	1	1	High-throughput	0.536	High
1157372	SETD2 Histone-lysine N-methyltransferase SETD2	1	3	High-throughput	0.536	High
1157383	PKHA2 Pleckstrin homology domain-containing family A member 2	1	1	High-throughput	0.536	High
1157393	RBM27 RNA-binding protein 27	1	1	High-throughput	0.536	High
1157399	DDX41 Probable ATP-dependent RNA helicase DDX41	1	4	High-throughput	0.536	High
48685	MED19 Mediator of RNA polymerase II transcription subunit 19	1	0	High-throughput	0.513	High
204681	E41L2 Band 4.1-like protein 2	1	0	High-throughput	0.513	High
235381	ADCY9 Adenylate cyclase type 9	1	0	High-throughput	0.513	High
242494	DKC1 H/ACA ribonucleoprotein complex subunit DKC1	1	0	High-throughput	0.513	High
334358	AL1A1 Aldehyde dehydrogenase 1A1	1	0	High-throughput	0.513	High
828793	SRP09 Signal recognition particle 9 kDa protein	1	0	High-throughput	0.513	High
834490	HINT1 Adenosine 5'-monophosphoramidase HINT1	1	0	High-throughput	0.513	High
905661	RS7 Small ribosomal subunit protein eS7	1	0	High-throughput	0.513	High
1063145	SEPT2 Septin-2	1	0	High-throughput	0.513	High
1074858	TAF7 Transcription initiation factor TFIID subunit 7	1	0	High-throughput	0.513	High
1113944	RABL6 Rab-like protein 6	1	0	High-throughput	0.513	High
1157340	SYT2 Synaptotagmin-2	1	0	High-throughput	0.513	High
1157342	RP9 Retinitis pigmentosa 9 protein	1	0	High-throughput	0.513	High
1157388	MED9 Mediator of RNA polymerase II transcription subunit 9	1	0	High-throughput	0.513	High
1157391	MED11 Mediator of RNA polymerase II transcription subunit 11	1	0	High-throughput	0.513	High
1157405	MED31 Mediator of RNA polymerase II transcription subunit 31	1	0	High-throughput	0.513	High
420845	H2B1J Histone H2B type 1-J	1	7	High-throughput	0.508	High
906862	PRS4 26S proteasome regulatory subunit 4	1	2	High-throughput	0.508	High
1060308	NFIX Nuclear factor 1 X-type	1	8	High-throughput	0.508	High
1116323	LARP7 La-related protein 7	1	7	High-throughput	0.508	High
1157323	AEBP2 Zinc finger protein AEBP2	1	3	High-throughput	0.508	High
1157334	SLN12 Ribonuclease SLFN12	1	3	High-throughput	0.508	High
1157361	STAC3 SH3 and cysteine-rich domain-containing protein 3	1	2	High-throughput	0.508	High
1157390	NHP2 H/ACA ribonucleoprotein complex subunit 2	1	2	High-throughput	0.508	High
1157407	ZN451 E3 SUMO-protein ligase ZNF451	1	1	High-throughput	0.508	High
174967	OGT1 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit	1	3	High-throughput	0.501	High
917449	H4 Histone H4	1	6	Small-scale	0.501	High
934886	H31 Histone H3.1	1	20	Small-scale	0.501	High
609917	ROA2 Heterogeneous nuclear ribonucleoproteins A2/B1	1	2	Small-scale	0.500	High
259452	NIPS2 Protein NipSnap homolog 2	1	1	High-throughput	0.489	High
312936	SLU7 Pre-mRNA-splicing factor SLU7	1	0	High-throughput	0.486	High
325967	GNA14 Guanine nucleotide-binding protein subunit alpha-14	1	0	High-throughput	0.486	High
1057888	DIP2A Disco-interacting protein 2 homolog A	1	0	High-throughput	0.486	High
1075323	TAF1A TATA box-binding protein-associated factor RNA polymerase I subunit A	1	0	High-throughput	0.486	High
1157324	FGD5 FYVE, RhoGEF and PH domain-containing protein 5	1	0	High-throughput	0.486	High
1157325	LIAT1 Protein LIAT1	1	0	High-throughput	0.486	High
1157336	CENPL Centromere protein L	1	0	High-throughput	0.486	High
1157331	CARM1 Histone-arginine methyltransferase CARM1	1	0	Small-scale	0.479	High
236778	CCNT1 Cyclin-T1	1	3	Small-scale	0.479	High
681488	DNJA1 DnaJ homolog subfamily A member 1	1	2	Small-scale	0.479	High
790679	WASP Actin nucleation-promoting factor WAS	1	2	Small-scale	0.479	High
824111	NR2C2 Nuclear receptor subfamily 2 group C member 2	1	6	High-throughput	0.479	High
965541	HMCS1 Hydroxymethylglutaryl-CoA synthase, cytoplasmic	1	1	Small-scale	0.479	High
986925	SUH Recombining binding protein suppressor of hairless	1	2	High-throughput	0.479	High
1048861	BOP1 Ribosome biogenesis protein BOP1	1	4	Small-scale	0.479	High
1067736	PDIA6 Protein disulfide-isomerase A6	1	3	High-throughput	0.479	High
1146508	A16L1 Autophagy-related protein 16-1	1	6	Small-scale	0.479	High
1157326	TRI67 Tripartite motif-containing protein 67	1	3	High-throughput	0.479	High
1157351	HS105 Heat shock protein 105 kDa	1	3	Small-scale	0.479	High
1157379	BRD9 Bromodomain-containing protein 9	1	10	High-throughput	0.479	High
1157384	WDR6 tRNA	1	7	Small-scale	0.479	High
1157396	ZRAN1 Ubiquitin thioesterase ZRANB1	1	5	High-throughput	0.479	High
1157408	TRAF6 TNF receptor-associated factor 6	1	1	Small-scale	0.479	High
1157387	ANKE1 Ankyrin repeat and EF-hand domain-containing protein 1	1	14	High-throughput	0.464	High
1157397	HMGX4 HMG domain-containing protein 4	1	7	High-throughput	0.464	High
169097	ARPC3 Actin-related protein 2/3 complex subunit 3	1	0	Small-scale	0.458	High
178065	NCAM2 Neural cell adhesion molecule 2	1	0	Small-scale	0.458	High
279598	FLOT1 Flotillin-1	1	0	Small-scale	0.458	High
400336	RLA1 Large ribosomal subunit protein P1	1	0	Small-scale	0.458	High
564941	HMGA1 High mobility group protein HMG-I/HMG-Y	1	0	Small-scale	0.458	High
654437	CALX Calnexin	1	0	Small-scale	0.458	High
875652	MFAP1 Microfibrillar-associated protein 1	1	0	Small-scale	0.458	High
896763	ARP3 Actin-related protein 3	1	0	Small-scale	0.458	High
1064405	U5S1 116 kDa U5 small nuclear ribonucleoprotein component	1	0	High-throughput	0.458	High
1157350	BAP1 Ubiquitin carboxyl-terminal hydrolase BAP1	1	0	High-throughput	0.458	High
1157357	CLUA1 Clusterin-associated protein 1	1	0	High-throughput	0.458	High
1157376	CHM4B Charged multivesicular body protein 4b	1	0	High-throughput	0.458	High
1157381	UCK1 Uridine-cytidine kinase 1	1	0	Small-scale	0.458	High
517313	PCNA Proliferating cell nuclear antigen	1	1	High-throughput	0.457	High
134087	DDX3X ATP-dependent RNA helicase DDX3X	1	3	Small-scale	0.445	High
235913	HNRPQ Heterogeneous nuclear ribonucleoprotein Q	1	2	Small-scale	0.445	High
442240	RU17 U1 small nuclear ribonucleoprotein 70 kDa	1	5	Small-scale	0.445	High
516559	PABP1 Polyadenylate-binding protein 1	1	2	Small-scale	0.445	High
523029	SRC Proto-oncogene tyrosine-protein kinase Src	1	3	Small-scale	0.445	High
541045	HNRPL Heterogeneous nuclear ribonucleoprotein L	1	3	Small-scale	0.445	High
571492	DDX5 Probable ATP-dependent RNA helicase DDX5	1	5	Small-scale	0.445	High
582341	NUCL Nucleolin	1	2	Small-scale	0.445	High
613492	SFPQ Splicing factor, proline- and glutamine-rich	1	5	Small-scale	0.445	High
726883	FUS RNA-binding protein FUS	1	4	Small-scale	0.445	High
967235	EWS RNA-binding protein EWS	1	2	Small-scale	0.445	High
1030297	G3BP1 Ras GTPase-activating protein-binding protein 1	1	1	Small-scale	0.445	High
1031365	PABP4 Polyadenylate-binding protein 4	1	2	Small-scale	0.445	High
1069710	NONO Non-POU domain-containing octamer-binding protein	1	7	Small-scale	0.445	High
1157349	PSPC1 Paraspeckle component 1	1	7	Small-scale	0.445	High
1157353	TFG Protein TFG	1	5	Small-scale	0.445	High
1157354	RBP56 TATA-binding protein-associated factor 2N	1	3	Small-scale	0.445	High
1157355	DDX17 Probable ATP-dependent RNA helicase DDX17	1	5	Small-scale	0.445	High
1157356	SMRD2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2	1	1	Small-scale	0.445	High
1157363	RBM14 RNA-binding protein 14	1	4	Small-scale	0.445	High
1157370	HNRL1 Heterogeneous nuclear ribonucleoprotein U-like protein 1	1	7	Small-scale	0.445	High
655398	P85A Phosphatidylinositol 3-kinase regulatory subunit alpha	1	0	Small-scale	0.426	High
903994	HNRPK Heterogeneous nuclear ribonucleoprotein K	1	0	Small-scale	0.426	High
1074047	SC23B Protein transport protein Sec23B	1	0	Small-scale	0.426	High
1077195	U2AFL U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1	1	2	High-throughput	0.407	High
1157378	CAAP1 Caspase activity and apoptosis inhibitor 1	2	0	High-throughput	0.328	High
1086425	NDUA5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5	1	0	High-throughput	0.279	Low
1157339	F133A Protein FAM133A	1	0	High-throughput	0.279	Low
1157344	ZCH10 Zinc finger CCHC domain-containing protein 10	1	0	High-throughput	0.279	Low
1157322	RSPO2 R-spondin-2	1	0	High-throughput	0.265	Low
320101	CXL14 C-X-C motif chemokine 14	1	0	Small-scale	0.261	Low
1126321	COQ5 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial	1	0	Small-scale	0.249	Low
1157371	TMED9 Transmembrane emp24 domain-containing protein 9	1	0	Small-scale	0.249	Low
483697	CT456 Cancer/testis antigen family 45 member A6	1	0	High-throughput	0.232	Low
484548	GAL3A Glutamine amidotransferase-like class 1 domain-containing protein 3, mitochondrial	1	0	High-throughput	0.232	Low