Protein: RRP6
Exosome complex exonuclease rrp6 (EC 3.1.13.-) (Ribosomal RNA-processing protein 6)

Gene: RRP6
Organism: Schizosaccharomyces pombe 972h-
Interactions: 54
UniProt ID: Q10146

Gene Ontology (top 5):
GO:0000166 - nucleotide binding
GO:0000175 - 3'-5'-RNA exonuclease activity
GO:0000176 - nuclear exosome (RNase complex)
GO:0000178 - exosome (RNase complex)
GO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

143149

YE02
Uncharacterized helicase C17H9.02

2

5

High-throughput

0.754

High

740345

DIS3
Exosome complex exonuclease dis3

3

5

Small-scale

0.640

High

145118

MTR4
ATP-dependent RNA helicase mtr4

1

5

High-throughput

0.618

High

194929

DHX15
Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43

1

2

High-throughput

0.618

High

251550

YQC7
Exosome complex protein C1739.07

1

1

High-throughput

0.618

High

1013540

RRP6
Exosome complex exonuclease rrp6

1

5

High-throughput

0.618

High

1013542

DBP3
ATP-dependent RNA helicase dbp3

1

1

High-throughput

0.618

High

1013544

YBH9
Uncharacterized protein C3B8.09

1

1

High-throughput

0.618

High

1013555

RED1
NURS complex subunit red1

2

1

Small-scale

0.601

High

194470

FFT3
ATP-dependent helicase fft3

1

0

High-throughput

0.586

High

1013543

RRP43
Exosome complex component rrp43

2

11

Small-scale

0.584

High

143257

EBP2
Probable rRNA-processing protein ebp2

1

1

High-throughput

0.479

High

143520

MPP10
U3 small nucleolar ribonucleoprotein protein mpp10

1

3

High-throughput

0.479

High

143964

SGD1
Suppressor of glycerol defect protein 1

1

2

High-throughput

0.479

High

193995

SPB1
AdoMet-dependent rRNA methyltransferase spb1

1

1

High-throughput

0.479

High

251942

GRN1
GTPase grn1

1

2

High-throughput

0.479

High

293883

SIR2
NAD-dependent histone deacetylase sir2

1

4

High-throughput

0.479

High

293960

RRP7
Ribosomal RNA-processing protein 7

1

1

High-throughput

0.479

High

777116

XRN2
5'-3' exoribonuclease 2

1

2

Small-scale

0.479

High

784818

GAR2
Protein gar2

1

2

High-throughput

0.479

High

953331

NAT10
RNA cytidine acetyltransferase

1

1

High-throughput

0.479

High

998444

MLO3
mRNA export protein mlo3

1

4

High-throughput

0.479

High

999775

RRP4
Exosome complex component rrp4

1

5

High-throughput

0.479

High

1013545

YL92
Uncharacterized protein C683.02c

1

4

High-throughput

0.479

High

1013546

UTP7
Probable U3 small nucleolar RNA-associated protein 7

1

6

High-throughput

0.479

High

1013547

TF3B
Transcription factor IIIB 60 kDa subunit

1

1

High-throughput

0.479

High

1013548

YNY5
LisH domain-containing protein C1711.05

1

1

High-throughput

0.479

High

1013549

YKU5
Uncharacterized WD repeat-containing protein C2E1P5.05

1

6

High-throughput

0.479

High

1013551

BFR2
Protein bfr2

1

1

High-throughput

0.479

High

1013554

CID14
Poly(A) RNA polymerase cid14

1

4

High-throughput

0.479

High

144280

YEAB
Uncharacterized protein UNK4.11c

1

0

High-throughput

0.458

High

145296

YFPE
Uncharacterized protein C7D4.14c

1

0

High-throughput

0.458

High

145463

PAB2
Polyadenylate-binding protein 2

1

0

Small-scale

0.458

High

223581

RAD14
DNA repair protein rad14

1

0

High-throughput

0.458

High

224170

PESC
Pescadillo homolog

1

0

High-throughput

0.458

High

252041

YBJC
Zinc finger CCCH domain-containing protein C337.12

1

0

High-throughput

0.458

High

252120

ESF1
Pre-rRNA-processing protein esf1

1

0

High-throughput

0.458

High

252567

MMI1
RNA binding exosome specificity factor Mmi1

1

0

High-throughput

0.458

High

293064

PIR2
NURS complex subunit pir2

1

0

High-throughput

0.458

High

293331

CWC26
Pre-mRNA-splicing factor cwf26

1

0

High-throughput

0.458

High

293790

JHD1
Putative JmjC domain-containing histone demethylation protein 1

1

0

High-throughput

0.458

High

294063

IPI1
Pre-rRNA-processing protein ipi1

1

0

High-throughput

0.458

High

953497

RIX1
Pre-rRNA-processing protein rix1

1

0

High-throughput

0.458

High

999915

FIP1X
Pre-mRNA polyadenylation factor fip1

1

0

Small-scale

0.458

High

1013541

YAW8
Uncharacterized protein C3F10.08c

1

0

High-throughput

0.458

High

1013550

PXR1
Protein pxr1

1

0

High-throughput

0.458

High

1013552

SIM3
NASP-related protein sim3

1

0

High-throughput

0.458

High

1013553

MRT4
Ribosome assembly factor mrt4

1

0

High-throughput

0.458

High

1013556

GRC3
Polynucleotide 5'-hydroxyl-kinase grc3

1

0

High-throughput

0.458

High

1013557

RPF2
Ribosome production factor 2 homolog

1

0

High-throughput

0.458

High

1013558

NOP16
Nucleolar protein 16

1

0

High-throughput

0.458

High

251679

RL27B
Large ribosomal subunit protein eL27B

1

1

High-throughput

0.437

High

999907

RS3A1
Small ribosomal subunit protein eS1A

1

2

High-throughput

0.437

High


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Last updated: 15 Jul 2024