Protein: BAF
Barrier-to-autointegration factor (Breakpoint cluster region protein 1) [Cleaved into: Barrier-to-autointegration factor, N-terminally processed]

Gene: BAF, BANF1
Organism: Homo sapiens
Interactions: 211
UniProt ID: O75531

Gene Ontology (top 5):
GO:0000785 - chromatin
GO:0000793 - condensed chromosome
GO:0003677 - DNA binding
GO:0003690 - double-stranded DNA binding
GO:0005634 - nucleus

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

285615

EMD
Emerin

11

0

Small-scale

0.928

High

285558

LMNA
Prelamin-A/C [Cleaved into: Lamin-A/C

5

4

Small-scale

0.912

High

285724

BAFL
Barrier-to-autointegration factor-like protein

3

2

High-throughput

0.858

High

285544

BAF
Barrier-to-autointegration factor

3

2

Small-scale

0.848

High

285585

LMNB1
Lamin-B1

1

4

High-throughput

0.691

High

285607

LAP2B
Lamina-associated polypeptide 2, isoforms beta/gamma

1

1

Small-scale

0.680

High

285702

UBXN4
UBX domain-containing protein 4

3

1

High-throughput

0.640

High

285632

H31
Histone H3.1

3

0

Small-scale

0.636

High

285606

LAP2A
Lamina-associated polypeptide 2, isoform alpha

1

1

Small-scale

0.618

High

285641

LMNB2
Lamin-B2

1

4

Small-scale

0.618

High

285568

PARP1
Poly [ADP-ribose] polymerase 1

2

0

Small-scale

0.585

High

285577

PO2F1
POU domain, class 2, transcription factor 1

2

0

Small-scale

0.585

High

285580

HMGA1
High mobility group protein HMG-I/HMG-Y

2

0

Small-scale

0.585

High

285661

NUMA1
Nuclear mitotic apparatus protein 1

2

0

Small-scale

0.585

High

259217

BRD4
Bromodomain-containing protein 4

2

4

High-throughput

0.584

High

285656

CDK13
Cyclin-dependent kinase 13

2

1

High-throughput

0.584

High

285713

SYGP1
Ras/Rap GTPase-activating protein SynGAP

2

0

High-throughput

0.576

High

285677

TMIG1
Transmembrane and immunoglobulin domain-containing protein 1

1

0

Small-scale

0.561

High

285711

EHMT2
Histone-lysine N-methyltransferase EHMT2

2

0

Small-scale

0.559

High

285643

SOX4
Transcription factor SOX-4

1

2

Small-scale

0.552

High

285559

ESR1
Estrogen receptor

2

0

High-throughput

0.547

High

285600

BMI1
Polycomb complex protein BMI-1

2

0

Small-scale

0.547

High

285617

RAB9A
Ras-related protein Rab-9A

2

0

High-throughput

0.547

High

285665

RBP1
RalA-binding protein 1

2

0

High-throughput

0.547

High

285671

H2B2E
Histone H2B type 2-E

1

1

High-throughput

0.536

High

285640

H11
Histone H1.1

1

1

Small-scale

0.527

High

209925

CRX
Cone-rod homeobox protein

1

1

Small-scale

0.527

High

285712

PWP2A
PWWP domain-containing protein 2A

1

1

High-throughput

0.515

High

166103

AIM2
Interferon-inducible protein AIM2

1

0

High-throughput

0.513

High

187235

SHIP2
Phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2

1

0

High-throughput

0.513

High

285554

SODC
Superoxide dismutase [Cu-Zn]

1

0

High-throughput

0.513

High

285567

DLDH
Dihydrolipoyl dehydrogenase, mitochondrial

1

0

High-throughput

0.513

High

285570

H2AZ
Histone H2A.Z

1

0

High-throughput

0.513

High

285572

TOP1
DNA topoisomerase 1

1

0

High-throughput

0.513

High

285573

TOP2A
DNA topoisomerase 2-alpha

1

0

High-throughput

0.513

High

285574

SRF
Serum response factor

1

0

High-throughput

0.513

High

285588

VDAC1
Non-selective voltage-gated ion channel VDAC1

1

0

High-throughput

0.513

High

285595

RL10
Large ribosomal subunit protein uL16

1

0

High-throughput

0.513

High

285633

HMGN5
High mobility group nucleosome-binding domain-containing protein 5

1

0

High-throughput

0.513

High

285644

SSRP1
FACT complex subunit SSRP1

1

0

High-throughput

0.513

High

285654

DYR1A
Dual specificity tyrosine-phosphorylation-regulated kinase 1A

1

0

High-throughput

0.513

High

285679

VP13C
Intermembrane lipid transfer protein VPS13C

1

0

High-throughput

0.513

High

285680

COX15
Heme A synthase COX15

1

0

High-throughput

0.513

High

285697

STYX
Serine/threonine/tyrosine-interacting protein

1

0

Small-scale

0.513

High

285715

EYA1
Protein phosphatase EYA1

1

0

High-throughput

0.513

High

285717

SSBP3
Single-stranded DNA-binding protein 3

1

0

High-throughput

0.513

High

285721

NUCKS
Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1

1

0

High-throughput

0.513

High

285727

MET14
N(6)-adenosine-methyltransferase non-catalytic subunit METTL14

1

0

High-throughput

0.513

High

285732

COMD3
COMM domain-containing protein 3

1

0

High-throughput

0.513

High

285714

ERBIN
Erbin

1

0

Small-scale

0.505

High

285582

VGFR1
Vascular endothelial growth factor receptor 1

1

3

High-throughput

0.500

High

285589

FGFR2
Fibroblast growth factor receptor 2

1

8

High-throughput

0.500

High

285598

EPHB2
Ephrin type-B receptor 2

1

5

High-throughput

0.500

High

285611

SOX2
Transcription factor SOX-2

1

2

High-throughput

0.500

High

285622

EPHA4
Ephrin type-A receptor 4

1

6

High-throughput

0.500

High

285647

MERTK
Tyrosine-protein kinase Mer

1

9

High-throughput

0.500

High

285668

NTRK3
NT-3 growth factor receptor

1

2

High-throughput

0.500

High

285693

DDHD1
Phospholipase DDHD1

1

0

High-throughput

0.493

High

285563

SP1
Transcription factor Sp1

1

0

High-throughput

0.479

High

285592

GATA2
Endothelial transcription factor GATA-2

1

0

High-throughput

0.479

High

285605

STAT3
Signal transducer and activator of transcription 3

1

0

High-throughput

0.479

High

122579

UBXN8
UBX domain-containing protein 8

1

1

High-throughput

0.479

High

245569

ZEB2
Zinc finger E-box-binding homeobox 2

1

1

High-throughput

0.479

High

282997

PSIP1
PC4 and SFRS1-interacting protein

1

1

Small-scale

0.479

High

285548

KI20A
Kinesin-like protein KIF20A

1

3

High-throughput

0.479

High

285555

MYC
Myc proto-oncogene protein

1

1

High-throughput

0.479

High

285560

MYCN
N-myc proto-oncogene protein

1

1

High-throughput

0.479

High

285562

HNRPC
Heterogeneous nuclear ribonucleoproteins C1/C2

1

1

Small-scale

0.479

High

285575

IFM1
Interferon-induced transmembrane protein 1

1

1

High-throughput

0.479

High

285579

H12
Histone H1.2

1

1

Small-scale

0.479

High

285581

CEBPB
CCAAT/enhancer-binding protein beta

1

1

High-throughput

0.479

High

285593

BRD2
Bromodomain-containing protein 2

1

3

High-throughput

0.479

High

285616

CDK9
Cyclin-dependent kinase 9

1

1

High-throughput

0.479

High

285618

SMCA2
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2

1

1

Small-scale

0.479

High

285623

FOXA1
Hepatocyte nuclear factor 3-alpha

1

2

High-throughput

0.479

High

285624

FOXL2
Forkhead box protein L2

1

2

Small-scale

0.479

High

285629

H2B1C
Histone H2B type 1-C/E/F/G/I

1

1

High-throughput

0.479

High

285631

TRA2B
Transformer-2 protein homolog beta

1

2

Small-scale

0.479

High

285634

CBX1
Chromobox protein homolog 1

1

1

Small-scale

0.479

High

285636

IFM3
Interferon-induced transmembrane protein 3

1

1

High-throughput

0.479

High

285637

XPC
DNA repair protein complementing XP-C cells

1

1

Small-scale

0.479

High

285639

KIF23
Kinesin-like protein KIF23

1

2

High-throughput

0.479

High

285645

RBBP4
Histone-binding protein RBBP4

1

1

Small-scale

0.479

High

285646

BPTF
Nucleosome-remodeling factor subunit BPTF

1

4

High-throughput

0.479

High

285649

CBX3
Chromobox protein homolog 3

1

1

Small-scale

0.479

High

285651

HDAC1
Histone deacetylase 1

1

2

Small-scale

0.479

High

285652

CUL3
Cullin-3

1

1

High-throughput

0.479

High

285653

CUL4A
Cullin-4A

1

1

Small-scale

0.479

High

285658

RBM39
RNA-binding protein 39

1

1

High-throughput

0.479

High

285662

TNIP1
TNFAIP3-interacting protein 1

1

2

High-throughput

0.479

High

285663

KIF14
Kinesin-like protein KIF14

1

1

High-throughput

0.479

High

285664

BRD3
Bromodomain-containing protein 3

1

3

High-throughput

0.479

High

285670

RBBP7
Histone-binding protein RBBP7

1

1

Small-scale

0.479

High

285673

BRDT
Bromodomain testis-specific protein

1

3

High-throughput

0.479

High

285675

A16L1
Autophagy-related protein 16-1

1

1

High-throughput

0.479

High

285687

VRK3
Serine/threonine-protein kinase VRK3

1

3

High-throughput

0.479

High

285692

ANKL1
Ankyrin repeat and LEM domain-containing protein 1

1

1

Small-scale

0.479

High

285696

RBCC1
RB1-inducible coiled-coil protein 1

1

2

High-throughput

0.479

High

285703

HDAC2
Histone deacetylase 2

1

2

Small-scale

0.479

High

285704

REQU
Zinc finger protein ubi-d4

1

1

Small-scale

0.479

High

285705

SMCE1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1

1

1

Small-scale

0.479

High

285707

CHM4C
Charged multivesicular body protein 4c

1

1

High-throughput

0.479

High

285716

VRK1
Serine/threonine-protein kinase VRK1

1

3

High-throughput

0.479

High

285719

TRI31
E3 ubiquitin-protein ligase TRIM31

1

1

High-throughput

0.479

High

285723

CHM4B
Charged multivesicular body protein 4b

1

1

High-throughput

0.479

High

285733

HDAC6
Protein deacetylase HDAC6

1

2

High-throughput

0.479

High

285735

ACINU
Apoptotic chromatin condensation inducer in the nucleus

1

1

Small-scale

0.479

High

134988

IF2B3
Insulin-like growth factor 2 mRNA-binding protein 3

1

0

High-throughput

0.458

High

156777

CTRO
Citron Rho-interacting kinase

1

0

High-throughput

0.458

High

176733

MCF2L
Guanine nucleotide exchange factor DBS

1

0

High-throughput

0.458

High

188748

TMPS2
Transmembrane protease serine 2

1

0

High-throughput

0.458

High

222584

PRC1
Protein regulator of cytokinesis 1

1

0

High-throughput

0.458

High

247564

NUPR1
Nuclear protein 1

1

0

High-throughput

0.458

High

285545

MTA2
Metastasis-associated protein MTA2

1

0

Small-scale

0.458

High

285546

UFL1
E3 UFM1-protein ligase 1

1

0

High-throughput

0.458

High

285547

HEXI1
Protein HEXIM1

1

0

High-throughput

0.458

High

285549

SMC2
Structural maintenance of chromosomes protein 2

1

0

High-throughput

0.458

High

285550

CD2B2
CD2 antigen cytoplasmic tail-binding protein 2

1

0

Small-scale

0.458

High

285552

TOP3B
DNA topoisomerase 3-beta-1

1

0

High-throughput

0.458

High

285553

ACL6A
Actin-like protein 6A

1

0

Small-scale

0.458

High

285556

TNFA
Tumor necrosis factor

1

0

High-throughput

0.458

High

285561

CATL1
Procathepsin L

1

0

High-throughput

0.458

High

285565

K1C16
Keratin, type I cytoskeletal 16

1

0

Small-scale

0.458

High

285576

KPYM
Pyruvate kinase PKM

1

0

Small-scale

0.458

High

285578

VATB1
V-type proton ATPase subunit B, kidney isoform

1

0

High-throughput

0.458

High

285584

BTF3
Transcription factor BTF3

1

0

High-throughput

0.458

High

285586

FLNA
Filamin-A

1

0

Small-scale

0.458

High

285591

CBL
E3 ubiquitin-protein ligase CBL

1

0

High-throughput

0.458

High

285594

DPP4
Dipeptidyl peptidase 4

1

0

High-throughput

0.458

High

285602

PP1G
Serine/threonine-protein phosphatase PP1-gamma catalytic subunit

1

0

High-throughput

0.458

High

285608

NKX21
Homeobox protein Nkx-2.1

1

0

High-throughput

0.458

High

285609

RECQ1
ATP-dependent DNA helicase Q1

1

0

Small-scale

0.458

High

285610

TISD
mRNA decay activator protein ZFP36L2

1

0

High-throughput

0.458

High

285612

NR2C2
Nuclear receptor subfamily 2 group C member 2

1

0

High-throughput

0.458

High

285619

TCP4
Activated RNA polymerase II transcriptional coactivator p15

1

0

Small-scale

0.458

High

285620

UBP14
Ubiquitin carboxyl-terminal hydrolase 14

1

0

High-throughput

0.458

High

285626

UBE2H
Ubiquitin-conjugating enzyme E2 H

1

0

High-throughput

0.458

High

285627

SMD3
Small nuclear ribonucleoprotein Sm D3

1

0

Small-scale

0.458

High

285628

H4
Histone H4

1

0

High-throughput

0.458

High

285630

RBX1
E3 ubiquitin-protein ligase RBX1

1

0

High-throughput

0.458

High

285635

SET
Protein SET

1

0

Small-scale

0.458

High

285642

TF65
Transcription factor p65

1

0

Small-scale

0.458

High

285648

CAF1B
Chromatin assembly factor 1 subunit B

1

0

Small-scale

0.458

High

285650

G3BP1
Ras GTPase-activating protein-binding protein 1

1

0

High-throughput

0.458

High

285657

HNRPD
Heterogeneous nuclear ribonucleoprotein D0

1

0

Small-scale

0.458

High

285659

MDC1
Mediator of DNA damage checkpoint protein 1

1

0

Small-scale

0.458

High

285660

CHD4
Chromodomain-helicase-DNA-binding protein 4

1

0

Small-scale

0.458

High

285669

DDB1
DNA damage-binding protein 1

1

0

Small-scale

0.458

High

285672

MIDN
Midnolin

1

0

High-throughput

0.458

High

285674

DGKK
Diacylglycerol kinase kappa

1

0

High-throughput

0.458

High

285676

ANO7
Anoctamin-7

1

0

Small-scale

0.458

High

285678

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.458

High

285681

APTX
Aprataxin

1

0

Small-scale

0.458

High

285682

KI21A
Kinesin-like protein KIF21A

1

0

High-throughput

0.458

High

285684

HUWE1
E3 ubiquitin-protein ligase HUWE1

1

0

High-throughput

0.458

High

285685

LBN
Limbin

1

0

Small-scale

0.458

High

285688

SPICE
Spindle and centriole-associated protein 1

1

0

High-throughput

0.458

High

285689

CNTRB
Centrobin

1

0

High-throughput

0.458

High

285690

SMIP4
Sperm-associated microtubule inner protein 4

1

0

High-throughput

0.458

High

285691

CCD89
Coiled-coil domain-containing protein 89

1

0

High-throughput

0.458

High

285694

NUP35
Nucleoporin NUP35

1

0

High-throughput

0.458

High

285695

SMRC2
SWI/SNF complex subunit SMARCC2

1

0

Small-scale

0.458

High

285698

BCL7C
B-cell CLL/lymphoma 7 protein family member C

1

0

Small-scale

0.458

High

285700

DDB2
DNA damage-binding protein 2

1

0

Small-scale

0.458

High

285701

BAP1
Ubiquitin carboxyl-terminal hydrolase BAP1

1

0

High-throughput

0.458

High

285708

AURKB
Aurora kinase B

1

0

High-throughput

0.458

High

285709

DDRGK
DDRGK domain-containing protein 1

1

0

Small-scale

0.458

High

285710

CK5P3
CDK5 regulatory subunit-associated protein 3

1

0

High-throughput

0.458

High

285720

DPY30
Protein dpy-30 homolog

1

0

Small-scale

0.458

High

285725

ECT2
Protein ECT2

1

0

High-throughput

0.458

High

285726

PKHA2
Pleckstrin homology domain-containing family A member 2

1

0

Small-scale

0.458

High

285728

NGB
Neuroglobin

1

0

High-throughput

0.458

High

285729

ANLN
Anillin

1

0

High-throughput

0.458

High

285731

LUZP4
Leucine zipper protein 4

1

0

Small-scale

0.458

High

285734

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.458

High

285737

FZR1
Fizzy-related protein homolog

1

0

High-throughput

0.458

High

285587

EPHA1
Ephrin type-A receptor 1

1

6

High-throughput

0.457

High

285590

FGFR3
Fibroblast growth factor receptor 3

1

9

High-throughput

0.457

High

285597

EPHA8
Ephrin type-A receptor 8

1

6

High-throughput

0.457

High

285603

FLT3
Receptor-type tyrosine-protein kinase FLT3

1

3

High-throughput

0.457

High

285621

EPHA5
Ephrin type-A receptor 5

1

6

High-throughput

0.457

High

285666

EPHA7
Ephrin type-A receptor 7

1

6

High-throughput

0.457

High

285571

TAU
Microtubule-associated protein tau

1

1

High-throughput

0.445

High

285604

VATA
V-type proton ATPase catalytic subunit A

1

1

High-throughput

0.445

High

285683

HDGR2
Hepatoma-derived growth factor-related protein 2

1

1

High-throughput

0.445

High

285564

MET
Hepatocyte growth factor receptor

1

7

High-throughput

0.437

High

285699

CLC4D
C-type lectin domain family 4 member D

1

1

High-throughput

0.437

High

285736

CLC4E
C-type lectin domain family 4 member E

1

1

High-throughput

0.437

High

285551

PTBP3
Polypyrimidine tract-binding protein 3

1

0

High-throughput

0.426

High

285625

CD81
CD81 antigen

1

0

Small-scale

0.426

High

285638

TAGL
Transgelin

1

0

High-throughput

0.426

High

285655

CAC1C
Voltage-dependent L-type calcium channel subunit alpha-1C

1

0

High-throughput

0.426

High

285667

ZKSC8
Zinc finger protein with KRAB and SCAN domains 8

1

0

High-throughput

0.426

High

285686

RIMS1
Regulating synaptic membrane exocytosis protein 1

1

0

High-throughput

0.426

High

285730

GRHL1
Grainyhead-like protein 1 homolog

1

0

High-throughput

0.426

High

285738

ZN337
Zinc finger protein 337

1

0

High-throughput

0.426

High

285614

CEBPA
CCAAT/enhancer-binding protein alpha

1

1

High-throughput

0.408

High

285718

ACE2
Angiotensin-converting enzyme 2

2

0

High-throughput

0.305

High

179769

BET1
BET1 homolog

2

0

High-throughput

0.298

High

285599

SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial

1

0

High-throughput

0.279

Low

285601

SOAT1
Sterol O-acyltransferase 1

1

0

High-throughput

0.279

Low

285557

HLAB
HLA class I histocompatibility antigen, B alpha chain

1

0

High-throughput

0.249

Low

285566

PAEP
Glycodelin

1

0

Small-scale

0.249

Low

285569

FURIN
Furin

1

0

High-throughput

0.249

Low

285583

ATP5J
ATP synthase peripheral stalk subunit F6, mitochondrial

1

0

Small-scale

0.249

Low

285596

CALX
Calnexin

1

0

High-throughput

0.249

Low

285613

EFTU
Elongation factor Tu, mitochondrial

1

0

Small-scale

0.249

Low

285706

ZN428
Zinc finger protein 428

1

0

Small-scale

0.249

Low

285722

SMOC2
SPARC-related modular calcium-binding protein 2

1

0

Small-scale

0.249

Low

254683

HCN1
Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025