Protein: CTR9
RNA polymerase-associated protein CTR9 homolog (SH2 domain-binding protein 1)

Gene: CTR9
Organism: Homo sapiens
Interactions: 218
UniProt ID: Q6PD62

Gene Ontology (top 5):
GO:0000122 - negative regulation of transcription by RNA polymerase II
GO:0000791 - euchromatin
GO:0000993 - RNA polymerase II complex binding
GO:0001711 - endodermal cell fate commitment
GO:0001826 - inner cell mass cell differentiation

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

1160942

PAF1
RNA polymerase II-associated factor 1 homolog

11

6

Small-scale

0.980

High

1158258

CDC73
Parafibromin

14

6

Small-scale

0.761

High

1160947

LEO1
RNA polymerase-associated protein LEO1

9

5

Small-scale

0.751

High

1160972

SKI8
Superkiller complex protein 8

7

16

Small-scale

0.748

High

1051967

ELOA1
Elongin-A

4

3

Small-scale

0.694

High

1160980

DDX21
Nucleolar RNA helicase 2

1

5

High-throughput

0.691

High

347086

MYC
Myc proto-oncogene protein

4

6

Small-scale

0.672

High

1160982

MBIP1
MAP3K12-binding inhibitory protein 1

3

1

High-throughput

0.667

High

624935

RPB1
DNA-directed RNA polymerase II subunit RPB1

3

1

Small-scale

0.650

High

726887

FUS
RNA-binding protein FUS

3

11

High-throughput

0.650

High

1160953

RTF1
RNA polymerase-associated protein RTF1 homolog

3

2

Small-scale

0.650

High

1072362

ELOB
Elongin-B

3

0

High-throughput

0.638

High

123986

SPT5H
Transcription elongation factor SPT5

2

6

High-throughput

0.628

High

489103

H14
Histone H1.4

2

7

High-throughput

0.628

High

841780

CDK9
Cyclin-dependent kinase 9

2

3

High-throughput

0.628

High

236781

CCNT1
Cyclin-T1

2

5

Small-scale

0.618

High

1055399

DHX8
ATP-dependent RNA helicase DHX8

1

3

High-throughput

0.618

High

1160966

DDX23
Probable ATP-dependent RNA helicase DDX23

1

8

High-throughput

0.618

High

583506

RPB3
DNA-directed RNA polymerase II subunit RPB3

2

2

Small-scale

0.611

High

931687

CSK2B
Casein kinase II subunit beta

2

3

High-throughput

0.611

High

1072239

ELOC
Elongin-C

2

1

High-throughput

0.611

High

1160935

ZCH18
Zinc finger CCCH domain-containing protein 18

2

7

High-throughput

0.611

High

612988

TCEA1
Transcription elongation factor A protein 1

2

2

Small-scale

0.608

High

975273

KMT2A
Histone-lysine N-methyltransferase 2A

1

19

Small-scale

0.597

High

244581

BRD4
Bromodomain-containing protein 4

2

5

Small-scale

0.584

High

455570

PARP1
Poly [ADP-ribose] polymerase 1

2

9

High-throughput

0.584

High

665905

PTN6
Tyrosine-protein phosphatase non-receptor type 6

2

1

Small-scale

0.584

High

985977

PTN11
Tyrosine-protein phosphatase non-receptor type 11

2

1

Small-scale

0.584

High

1160940

SLX4
Structure-specific endonuclease subunit SLX4

2

8

High-throughput

0.584

High

124515

TULP2
Tubby-related protein 2

2

1

High-throughput

0.574

High

331388

APBA3
Amyloid-beta A4 precursor protein-binding family A member 3

2

2

High-throughput

0.574

High

369839

ESR1
Estrogen receptor

2

20

High-throughput

0.571

High

850749

BMX
Cytoplasmic tyrosine-protein kinase BMX

2

3

High-throughput

0.571

High

559777

H12
Histone H1.2

1

7

Small-scale

0.561

High

684824

STIP1
Stress-induced-phosphoprotein 1

1

11

High-throughput

0.553

High

1062544

EMC2
ER membrane protein complex subunit 2

1

6

High-throughput

0.553

High

1160938

DHX40
Probable ATP-dependent RNA helicase DHX40

1

3

High-throughput

0.553

High

130160

ELL2
RNA polymerase II elongation factor ELL2

1

3

High-throughput

0.536

High

443203

NFIC
Nuclear factor 1 C-type

1

10

High-throughput

0.536

High

446677

SNRPA
U1 small nuclear ribonucleoprotein A

1

10

High-throughput

0.536

High

448707

RU1C
U1 small nuclear ribonucleoprotein C

1

1

High-throughput

0.536

High

508577

TOP1
DNA topoisomerase 1

1

1

High-throughput

0.536

High

539015

RSMB
Small nuclear ribonucleoprotein-associated proteins B and B'

1

2

High-throughput

0.536

High

796113

MAGA9
Melanoma-associated antigen 9

1

3

High-throughput

0.536

High

818167

SOX2
Transcription factor SOX-2

1

12

High-throughput

0.536

High

851825

UB2E1
Ubiquitin-conjugating enzyme E2 E1

1

2

Small-scale

0.536

High

876646

ELL
RNA polymerase II elongation factor ELL

1

2

High-throughput

0.536

High

911872

RUXF
Small nuclear ribonucleoprotein F

1

5

High-throughput

0.536

High

943126

KC1G2
Casein kinase I isoform gamma-2

1

2

High-throughput

0.536

High

964201

FOXK2
Forkhead box protein K2

1

8

High-throughput

0.536

High

996719

SSRP1
FACT complex subunit SSRP1

1

11

High-throughput

0.536

High

1069385

TEBP
Prostaglandin E synthase 3

1

1

High-throughput

0.536

High

1084498

CPSF6
Cleavage and polyadenylation specificity factor subunit 6

1

12

High-throughput

0.536

High

1087202

H2B2E
Histone H2B type 2-E

1

3

High-throughput

0.536

High

1132080

SNPC4
snRNA-activating protein complex subunit 4

1

1

High-throughput

0.536

High

1137924

RPRD2
Regulation of nuclear pre-mRNA domain-containing protein 2

1

6

High-throughput

0.536

High

1160932

SPT6H
Transcription elongation factor SPT6

1

4

High-throughput

0.536

High

1160939

YAF2
YY1-associated factor 2

1

1

High-throughput

0.536

High

1160957

ERGI1
Endoplasmic reticulum-Golgi intermediate compartment protein 1

1

1

High-throughput

0.536

High

1160959

EFMT3
EEF1A lysine methyltransferase 3

1

6

High-throughput

0.536

High

1160960

ZFP91
E3 ubiquitin-protein ligase ZFP91

1

2

High-throughput

0.536

High

1160963

PP1RA
Serine/threonine-protein phosphatase 1 regulatory subunit 10

1

1

High-throughput

0.536

High

1160964

IWS1
Protein IWS1 homolog

1

3

High-throughput

0.536

High

1160978

ANLN
Anillin

1

1

High-throughput

0.536

High

1160990

AFF4
AF4/FMR2 family member 4

1

6

High-throughput

0.536

High

1160997

NGN3
Neurogenin-3

1

3

High-throughput

0.536

High

1160998

NFS1
Cysteine desulfurase

1

1

High-throughput

0.536

High

1160981

DISC1
Disrupted in schizophrenia 1 protein

2

2

High-throughput

0.513

High

181428

RPB4
DNA-directed RNA polymerase II subunit RPB4

1

0

High-throughput

0.513

High

564942

HMGA1
High mobility group protein HMG-I/HMG-Y

1

0

High-throughput

0.513

High

781558

CETN2
Centrin-2

1

0

High-throughput

0.513

High

869876

PMS2
Mismatch repair endonuclease PMS2

1

0

High-throughput

0.513

High

897544

RPAB2
DNA-directed RNA polymerases I, II, and III subunit RPABC2

1

0

High-throughput

0.513

High

913911

RPB7
DNA-directed RNA polymerase II subunit RPB7

1

0

High-throughput

0.513

High

942047

RPP38
Ribonuclease P protein subunit p38

1

0

High-throughput

0.513

High

1125659

SGO1
Shugoshin 1

1

0

High-throughput

0.513

High

1152332

CNDH2
Condensin-2 complex subunit H2

1

0

High-throughput

0.513

High

1160937

SUGP1
SURP and G-patch domain-containing protein 1

1

0

High-throughput

0.513

High

1160946

HASP
Serine/threonine-protein kinase haspin

1

0

High-throughput

0.513

High

1160952

DGCR8
Microprocessor complex subunit DGCR8

1

0

High-throughput

0.513

High

1160965

SIN1
Target of rapamycin complex 2 subunit MAPKAP1

1

0

High-throughput

0.513

High

1160975

BEX1
Protein BEX1

1

0

High-throughput

0.513

High

1160985

GAR1
H/ACA ribonucleoprotein complex subunit 1

1

0

High-throughput

0.513

High

171408

SMAD9
Mothers against decapentaplegic homolog 9

1

3

High-throughput

0.508

High

1160936

SIAH1
E3 ubiquitin-protein ligase SIAH1

1

3

Small-scale

0.504

High

902636

SUMO2
Small ubiquitin-related modifier 2

1

4

High-throughput

0.501

High

277513

CCNK
Cyclin-K

1

1

Small-scale

0.500

High

883163

HUNK
Hormonally up-regulated neu tumor-associated kinase

1

3

High-throughput

0.494

High

62150

RCCD1
RCC1 domain-containing protein 1

1

4

High-throughput

0.489

High

71155

HNRC2
Heterogeneous nuclear ribonucleoprotein C-like 2

1

3

High-throughput

0.489

High

203376

IF4G3
Eukaryotic translation initiation factor 4 gamma 3

1

4

High-throughput

0.489

High

297505

TOX4
TOX high mobility group box family member 4

1

7

High-throughput

0.489

High

363211

FINC
Fibronectin

1

1

High-throughput

0.489

High

683457

1433B
14-3-3 protein beta/alpha

1

15

High-throughput

0.489

High

713538

GLYM
Serine hydroxymethyltransferase, mitochondrial

1

1

High-throughput

0.489

High

795541

AL3B1
Aldehyde dehydrogenase family 3 member B1

1

3

High-throughput

0.489

High

1100060

INF2
Inverted formin-2

1

2

High-throughput

0.489

High

1122428

ACTBL
Beta-actin-like protein 2

1

4

High-throughput

0.489

High

1132652

FKB15
FK506-binding protein 15

1

5

High-throughput

0.489

High

1160929

LYZL1
Lysozyme-like protein 1

1

3

High-throughput

0.489

High

1160931

FGD6
FYVE, RhoGEF and PH domain-containing protein 6

1

2

High-throughput

0.489

High

1160943

SYT2
Synaptotagmin-2

1

1

High-throughput

0.489

High

1160954

TM131
Transmembrane protein 131

1

7

High-throughput

0.489

High

1160958

TRI52
E3 ubiquitin-protein ligase TRIM52

1

2

High-throughput

0.489

High

1160967

KLF16
Krueppel-like factor 16

1

9

High-throughput

0.489

High

1160969

NDEL1
Nuclear distribution protein nudE-like 1

1

3

High-throughput

0.489

High

1160973

TAOK3
Serine/threonine-protein kinase TAO3

1

6

High-throughput

0.489

High

1160976

AGO4
Protein argonaute-4

1

1

High-throughput

0.489

High

989535

SOX4
Transcription factor SOX-4

1

12

Small-scale

0.481

High

162885

XPO1
Exportin-1

1

5

High-throughput

0.479

High

179691

RPA34
DNA-directed RNA polymerase I subunit RPA34

1

3

High-throughput

0.479

High

227803

PRKN
E3 ubiquitin-protein ligase parkin

1

10

High-throughput

0.479

High

233511

NUPR1
Nuclear protein 1

1

1

High-throughput

0.479

High

258075

DNJB6
DnaJ homolog subfamily B member 6

1

3

High-throughput

0.479

High

278826

DNJC8
DnaJ homolog subfamily C member 8

1

5

High-throughput

0.479

High

311815

TACC2
Transforming acidic coiled-coil-containing protein 2

1

6

High-throughput

0.479

High

360054

LMNA
Prelamin-A/C [Cleaved into: Lamin-A/C

1

5

High-throughput

0.479

High

386942

P53
Cellular tumor antigen p53

1

5

High-throughput

0.479

High

487530

ANDR
Androgen receptor

1

20

High-throughput

0.479

High

552982

RFA2
Replication protein A 32 kDa subunit

1

5

High-throughput

0.479

High

569821

CEBPB
CCAAT/enhancer-binding protein beta

1

6

High-throughput

0.479

High

586811

CSK22
Casein kinase II subunit alpha'

1

7

High-throughput

0.479

High

651484

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

5

High-throughput

0.479

High

656255

PSA5
Proteasome subunit alpha type-5

1

1

Small-scale

0.479

High

676916

RPB2
DNA-directed RNA polymerase II subunit RPB2

1

2

High-throughput

0.479

High

720731

RFA3
Replication protein A 14 kDa subunit

1

4

High-throughput

0.479

High

750315

COIL
Coilin

1

2

High-throughput

0.479

High

824118

NR2C2
Nuclear receptor subfamily 2 group C member 2

1

5

High-throughput

0.479

High

826299

CDK8
Cyclin-dependent kinase 8

1

3

High-throughput

0.479

High

831433

CEBPA
CCAAT/enhancer-binding protein alpha

1

6

High-throughput

0.479

High

841243

CDK7
Cyclin-dependent kinase 7

1

1

High-throughput

0.479

High

850089

UBP11
Ubiquitin carboxyl-terminal hydrolase 11

1

2

High-throughput

0.479

High

917459

H4
Histone H4

1

4

High-throughput

0.479

High

934251

CSK21
Casein kinase II subunit alpha

1

9

High-throughput

0.479

High

934895

H31
Histone H3.1

1

7

Small-scale

0.479

High

971225

H11
Histone H1.1

1

7

Small-scale

0.479

High

976468

ERCC6
DNA excision repair protein ERCC-6

1

11

Small-scale

0.479

High

998819

EP300
Histone acetyltransferase p300

1

11

High-throughput

0.479

High

1018538

CHD3
Chromodomain-helicase-DNA-binding protein 3

1

7

High-throughput

0.479

High

1035833

BIRC3
Baculoviral IAP repeat-containing protein 3

1

4

High-throughput

0.479

High

1048542

VEZF1
Vascular endothelial zinc finger 1

1

5

High-throughput

0.479

High

1058678

2A5D
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform

1

3

High-throughput

0.479

High

1059682

CHD4
Chromodomain-helicase-DNA-binding protein 4

1

6

High-throughput

0.479

High

1064416

U5S1
116 kDa U5 small nuclear ribonucleoprotein component

1

3

High-throughput

0.479

High

1065629

SETB1
Histone-lysine N-methyltransferase SETDB1

1

10

Small-scale

0.479

High

1116329

LARP7
La-related protein 7

1

9

High-throughput

0.479

High

1160941

SIR6
NAD-dependent protein deacylase sirtuin-6

1

3

High-throughput

0.479

High

1160944

CSK23
Casein kinase II subunit alpha 3

1

9

High-throughput

0.479

High

1160948

PRP31
U4/U6 small nuclear ribonucleoprotein Prp31

1

6

High-throughput

0.479

High

1160949

DNJC9
DnaJ homolog subfamily C member 9

1

7

High-throughput

0.479

High

1160951

ING5
Inhibitor of growth protein 5

1

2

High-throughput

0.479

High

1160955

ESR2
Estrogen receptor beta

1

20

High-throughput

0.479

High

1160956

KAT6A
Histone acetyltransferase KAT6A

1

16

High-throughput

0.479

High

1160961

EHMT2
Histone-lysine N-methyltransferase EHMT2

1

1

Small-scale

0.479

High

1160971

RPA49
DNA-directed RNA polymerase I subunit RPA49

1

2

High-throughput

0.479

High

1160983

RAD18
E3 ubiquitin-protein ligase RAD18

1

1

High-throughput

0.479

High

1160984

DJC17
DnaJ homolog subfamily C member 17

1

12

High-throughput

0.479

High

1160986

TLS1
Splicing factor C9orf78

1

2

High-throughput

0.479

High

1160988

DNM3B
DNA

1

1

Small-scale

0.479

High

1160989

ZRAN1
Ubiquitin thioesterase ZRANB1

1

5

High-throughput

0.479

High

1160992

AGO2
Protein argonaute-2

1

1

Small-scale

0.479

High

1160993

FZR1
Fizzy-related protein homolog

1

11

High-throughput

0.479

High

1160996

ZN330
Zinc finger protein 330

1

1

High-throughput

0.479

High

1160999

DNM3A
DNA

1

1

Small-scale

0.479

High

1160991

CNTP2
Contactin-associated protein-like 2

1

1

Small-scale

0.464

High

201808

RIPK2
Receptor-interacting serine/threonine-protein kinase 2

1

0

High-throughput

0.458

High

776720

STAT3
Signal transducer and activator of transcription 3

1

0

Small-scale

0.458

High

887532

ELOF1
Transcription elongation factor 1 homolog

1

0

Small-scale

0.458

High

973353

TOP2B
DNA topoisomerase 2-beta

1

0

High-throughput

0.458

High

1153849

IFIX
Pyrin and HIN domain-containing protein 1

1

0

High-throughput

0.458

High

87264

C9J2Y9
DNA-directed RNA polymerase subunit beta

1

2

High-throughput

0.445

High

92366

E9PBC6
Transforming acidic coiled-coil containing protein 2

1

8

High-throughput

0.445

High

111449

J3QSH4
Vascular endothelial zinc finger 1

1

4

High-throughput

0.445

High

295638

RMP
Unconventional prefoldin RPB5 interactor 1

1

2

Small-scale

0.445

High

829022

UBE2A
Ubiquitin-conjugating enzyme E2 A

1

3

Small-scale

0.445

High

927759

UBE2B
Ubiquitin-conjugating enzyme E2 B

1

3

Small-scale

0.445

High

988951

FMR1
Fragile X messenger ribonucleoprotein 1

1

2

High-throughput

0.445

High

1160977

CHD8
Chromodomain-helicase-DNA-binding protein 8

1

9

High-throughput

0.445

High

148955

CTRO
Citron Rho-interacting kinase

1

1

High-throughput

0.437

High

282931

CIAO1
Probable cytosolic iron-sulfur protein assembly protein CIAO1

1

14

High-throughput

0.437

High

362002

FIBG
Fibrinogen gamma chain

1

1

Small-scale

0.437

High

382035

G3P
Glyceraldehyde-3-phosphate dehydrogenase

1

1

Small-scale

0.437

High

385022

NTRK1
High affinity nerve growth factor receptor

1

8

High-throughput

0.437

High

596774

CD11B
Cyclin-dependent kinase 11B

1

3

High-throughput

0.437

High

908709

UBE2H
Ubiquitin-conjugating enzyme E2 H

1

5

High-throughput

0.437

High

1024035

ACACA
Acetyl-CoA carboxylase 1

1

2

High-throughput

0.437

High

1160930

TRI67
Tripartite motif-containing protein 67

1

10

High-throughput

0.437

High

1160933

PARPT
Protein mono-ADP-ribosyltransferase TIPARP

1

5

High-throughput

0.437

High

1160945

NEK9
Serine/threonine-protein kinase Nek9

1

6

High-throughput

0.437

High

1160970

MLP3B
Microtubule-associated proteins 1A/1B light chain 3B

1

3

High-throughput

0.437

High

1160974

PKHA4
Pleckstrin homology domain-containing family A member 4

1

12

High-throughput

0.437

High

1160987

HECW2
E3 ubiquitin-protein ligase HECW2

1

7

High-throughput

0.437

High

1160994

RHG26
Rho GTPase-activating protein 26

1

2

High-throughput

0.437

High

1160995

CD11A
Cyclin-dependent kinase 11A

1

3

High-throughput

0.437

High

942097

RPP30
Ribonuclease P protein subunit p30

1

0

High-throughput

0.426

High

91333

E5RHG8
Elongin-C

1

1

High-throughput

0.407

High

92456

E9PEN0
Inhibitor of growth family member 5

1

1

High-throughput

0.407

High

92475

E9PFR3
Serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit

1

3

High-throughput

0.407

High

353684

IGHG1
Immunoglobulin heavy constant gamma 1

1

3

High-throughput

0.407

High

353954

IGHM
Immunoglobulin heavy constant mu

1

5

High-throughput

0.407

High

354082

IGHA1
Immunoglobulin heavy constant alpha 1

1

3

High-throughput

0.407

High

484458

RPAC2
DNA-directed RNA polymerases I and III subunit RPAC2

1

1

High-throughput

0.407

High

1160950

MYLIP
E3 ubiquitin-protein ligase MYLIP

2

0

High-throughput

0.328

High

204499

ARK72
Aflatoxin B1 aldehyde reductase member 2

1

0

High-throughput

0.279

Low

254344

ATP9A
Probable phospholipid-transporting ATPase IIA

1

0

High-throughput

0.279

Low

304545

PRS23
Serine protease 23

1

0

High-throughput

0.279

Low

509245

G6PD
Glucose-6-phosphate 1-dehydrogenase

1

0

High-throughput

0.279

Low

626652

ARBK1
Beta-adrenergic receptor kinase 1

1

0

High-throughput

0.279

Low

828798

SRP09
Signal recognition particle 9 kDa protein

1

0

High-throughput

0.279

Low

951869

SERF2
Small EDRK-rich factor 2

1

0

High-throughput

0.279

Low

1107877

F161A
Protein FAM161A

1

0

High-throughput

0.279

Low

1127791

TJAP1
Tight junction-associated protein 1

1

0

High-throughput

0.279

Low

1160928

LYPD4
Ly6/PLAUR domain-containing protein 4

1

0

High-throughput

0.279

Low

1160934

PXK
PX domain-containing protein kinase-like protein

1

0

High-throughput

0.279

Low

1160962

TEAN2
Transcription elongation factor A N-terminal and central domain-containing protein 2

1

0

High-throughput

0.279

Low

1160968

ANO3
Anoctamin-3

1

0

High-throughput

0.279

Low

1160979

ACSA
Acetyl-coenzyme A synthetase, cytoplasmic

1

0

High-throughput

0.279

Low

1116247

MINY4
Probable ubiquitin carboxyl-terminal hydrolase MINDY-4

1

0

Small-scale

0.249

Low


Service provided by Combinatics, Japan

Last updated: 15 Jul 2024