Protein: PR38A
Pre-mRNA-splicing factor 38A

Gene: PR38A, PRPF38A
Organism: Homo sapiens
Interactions: 161
UniProt ID: Q8NAV1

Gene Ontology (top 5):
GO:0000398 - mRNA splicing, via spliceosome
GO:0003723 - RNA binding
GO:0005634 - nucleus
GO:0005654 - nucleoplasm
GO:0071005 - U2-type precatalytic spliceosome

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

875682

MFAP1
Microfibrillar-associated protein 1

5

3

High-throughput

0.916

High

942808

SRPK2
SRSF protein kinase 2

7

4

High-throughput

0.754

High

1239274

SDCB2
Syntenin-2

4

1

High-throughput

0.698

High

1239266

SRPK1
SRSF protein kinase 1

3

4

High-throughput

0.680

High

1157341

JMJD6
Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6

4

0

Small-scale

0.675

High

878204

SEC13
Protein SEC13 homolog

3

0

High-throughput

0.638

High

833927

CLK2
Dual specificity protein kinase CLK2

2

1

High-throughput

0.633

High

952038

SRSF3
Serine/arginine-rich splicing factor 3

2

4

High-throughput

0.625

High

1239248

PR38A
Pre-mRNA-splicing factor 38A

1

0

High-throughput

0.622

High

1084335

SRSF7
Serine/arginine-rich splicing factor 7

2

2

High-throughput

0.606

High

833774

CLK1
Dual specificity protein kinase CLK1

2

1

High-throughput

0.594

High

1054440

RBM39
RNA-binding protein 39

2

0

High-throughput

0.575

High

132951

SDCB1
Syntenin-1

1

1

High-throughput

0.573

High

370017

ESR1
Estrogen receptor

2

1

High-throughput

0.571

High

934319

CSK21
Casein kinase II subunit alpha

1

2

High-throughput

0.569

High

347344

MYC
Myc proto-oncogene protein

2

0

High-throughput

0.559

High

1159744

RHGBA
Rho GTPase-activating protein 11A

2

0

High-throughput

0.547

High

71184

HNRC2
Heterogeneous nuclear ribonucleoprotein C-like 2

1

1

High-throughput

0.536

High

241330

HNRC1
Heterogeneous nuclear ribonucleoprotein C-like 1

1

1

High-throughput

0.536

High

260580

TP4A3
Protein tyrosine phosphatase type IVA 3

1

1

High-throughput

0.536

High

617332

SP100
Nuclear autoantigen Sp-100

1

1

High-throughput

0.536

High

739192

ODO2
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial

1

1

High-throughput

0.536

High

1028736

SRSF5
Serine/arginine-rich splicing factor 5

1

3

High-throughput

0.536

High

1029000

SRSF6
Serine/arginine-rich splicing factor 6

1

3

High-throughput

0.536

High

1071525

E2F5
Transcription factor E2F5

1

1

High-throughput

0.536

High

1239291

SRPK3
SRSF protein kinase 3

1

5

High-throughput

0.536

High

1016388

TF3C1
General transcription factor 3C polypeptide 1

1

0

High-throughput

0.518

High

1050434

DPOA2
DNA polymerase alpha subunit B

1

0

High-throughput

0.518

High

440622

ODPA
Pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial

1

0

High-throughput

0.513

High

448743

RU1C
U1 small nuclear ribonucleoprotein C

1

0

High-throughput

0.513

High

617960

H2B1O
Histone H2B type 1-O

1

0

High-throughput

0.513

High

887580

APC15
Anaphase-promoting complex subunit 15

1

0

High-throughput

0.513

High

911190

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.513

High

921345

RBX1
E3 ubiquitin-protein ligase RBX1

1

0

High-throughput

0.513

High

928139

SUMO1
Small ubiquitin-related modifier 1

1

0

High-throughput

0.513

High

958481

CYC
Cytochrome c

1

0

High-throughput

0.513

High

1019026

TP53B
TP53-binding protein 1

1

0

High-throughput

0.513

High

1068215

PEA15
Astrocytic phosphoprotein PEA-15

1

0

High-throughput

0.513

High

1079003

UB2V2
Ubiquitin-conjugating enzyme E2 variant 2

1

0

High-throughput

0.513

High

1239258

EZH1
Histone-lysine N-methyltransferase EZH1

1

0

High-throughput

0.513

High

1239269

H2AJ
Histone H2A.J

1

0

High-throughput

0.513

High

1239290

TPX2
Targeting protein for Xklp2

1

0

High-throughput

0.513

High

1239294

CFA20
Cilia- and flagella-associated protein 20

1

0

High-throughput

0.513

High

993772

SRSF4
Serine/arginine-rich splicing factor 4

1

2

High-throughput

0.508

High

153729

ANM5
Protein arginine N-methyltransferase 5

1

0

High-throughput

0.486

High

963242

U2AF1
Splicing factor U2AF 35 kDa subunit

1

0

High-throughput

0.486

High

1034012

PPIG
Peptidyl-prolyl cis-trans isomerase G

1

0

High-throughput

0.486

High

1055428

DHX8
ATP-dependent RNA helicase DHX8

1

0

High-throughput

0.486

High

1070556

RNPS1
RNA-binding protein with serine-rich domain 1

1

0

High-throughput

0.486

High

1085442

MK06
Mitogen-activated protein kinase 6

1

0

High-throughput

0.486

High

1219705

CHERP
Calcium homeostasis endoplasmic reticulum protein

1

0

High-throughput

0.486

High

476054

UBC
Polyubiquitin-C [Cleaved into: Ubiquitin]

1

0

High-throughput

0.480

High

239364

CC14B
Dual specificity protein phosphatase CDC14B

1

1

High-throughput

0.479

High

263739

PR40A
Pre-mRNA-processing factor 40 homolog A

1

1

High-throughput

0.479

High

297525

TOX4
TOX high mobility group box family member 4

1

1

High-throughput

0.479

High

308892

KI20A
Kinesin-like protein KIF20A

1

2

High-throughput

0.479

High

442314

RU17
U1 small nuclear ribonucleoprotein 70 kDa

1

1

High-throughput

0.479

High

817708

PI42A
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha

1

1

High-throughput

0.479

High

969858

KIF23
Kinesin-like protein KIF23

1

1

High-throughput

0.479

High

1036736

SQSTM
Sequestosome-1

1

1

High-throughput

0.479

High

1037844

PRP4K
Serine/threonine-protein kinase PRP4 homolog

1

2

High-throughput

0.479

High

1081323

E2F4
Transcription factor E2F4

1

1

High-throughput

0.479

High

1085828

IF16
Gamma-interferon-inducible protein 16

1

1

High-throughput

0.479

High

1153874

IFIX
Pyrin and HIN domain-containing protein 1

1

1

High-throughput

0.479

High

1239251

FA76A
Protein FAM76A

1

1

High-throughput

0.479

High

1239253

PI42C
Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma

1

1

High-throughput

0.479

High

1239257

ESR2
Estrogen receptor beta

1

1

High-throughput

0.479

High

64868

SRRM4
Serine/arginine repetitive matrix protein 4

1

0

High-throughput

0.460

High

719748

RADI
Radixin

1

0

High-throughput

0.460

High

1239267

SRSF8
Serine/arginine-rich splicing factor 8

1

0

High-throughput

0.460

High

1239292

LC7L2
Putative RNA-binding protein Luc7-like 2

1

0

High-throughput

0.460

High

92267

E9PAV9
G patch domain-containing protein 4

1

0

High-throughput

0.458

High

163007

XPO1
Exportin-1

1

0

High-throughput

0.458

High

210129

PRC1
Protein regulator of cytokinesis 1

1

0

High-throughput

0.458

High

214992

CPSF5
Cleavage and polyadenylation specificity factor subunit 5

1

0

High-throughput

0.458

High

233544

NUPR1
Nuclear protein 1

1

0

High-throughput

0.458

High

243065

KIN17
DNA/RNA-binding protein KIN17

1

0

Small-scale

0.458

High

268178

EED
Polycomb protein EED

1

0

High-throughput

0.458

High

360168

LMNA
Prelamin-A/C [Cleaved into: Lamin-A/C

1

0

High-throughput

0.458

High

374545

RAF1
RAF proto-oncogene serine/threonine-protein kinase

1

0

High-throughput

0.458

High

547579

FOLR1
Folate receptor alpha

1

0

High-throughput

0.458

High

553198

RFA2
Replication protein A 32 kDa subunit

1

0

High-throughput

0.458

High

632817

TYY1
Transcriptional repressor protein YY1

1

0

High-throughput

0.458

High

651699

RFA1
Replication protein A 70 kDa DNA-binding subunit

1

0

High-throughput

0.458

High

720926

RFA3
Replication protein A 14 kDa subunit

1

0

High-throughput

0.458

High

757688

IF4A3
Eukaryotic initiation factor 4A-III

1

0

High-throughput

0.458

High

814821

RL29
Large ribosomal subunit protein eL29

1

0

High-throughput

0.458

High

822320

KC1D
Casein kinase I isoform delta

1

0

High-throughput

0.458

High

824195

NR2C2
Nuclear receptor subfamily 2 group C member 2

1

0

High-throughput

0.458

High

833479

RBM25
RNA-binding protein 25

1

0

High-throughput

0.458

High

848083

MECP2
Methyl-CpG-binding protein 2

1

0

High-throughput

0.458

High

908830

UBE2H
Ubiquitin-conjugating enzyme E2 H

1

0

High-throughput

0.458

High

917603

H4
Histone H4

1

0

High-throughput

0.458

High

1029644

TIF1B
Transcription intermediary factor 1-beta

1

0

High-throughput

0.458

High

1066407

KIF14
Kinesin-like protein KIF14

1

0

High-throughput

0.458

High

1158783

TAF2
Transcription initiation factor TFIID subunit 2

1

0

High-throughput

0.458

High

1164845

FIP1
Pre-mRNA 3'-end-processing factor FIP1

1

0

High-throughput

0.458

High

1184211

MEPCE
7SK snRNA methylphosphate capping enzyme

1

0

High-throughput

0.458

High

1189867

NUFP2
FMR1-interacting protein NUFIP2

1

0

High-throughput

0.458

High

1201541

ZCH18
Zinc finger CCCH domain-containing protein 18

1

0

High-throughput

0.458

High

1204672

DDX42
ATP-dependent RNA helicase DDX42

1

0

High-throughput

0.458

High

1234632

NOPC1
NOP protein chaperone 1

1

0

High-throughput

0.458

High

1235559

ZBTB2
Zinc finger and BTB domain-containing protein 2

1

0

High-throughput

0.458

High

1235741

CPSF7
Cleavage and polyadenylation specificity factor subunit 7

1

0

High-throughput

0.458

High

1239250

SNIP1
Smad nuclear-interacting protein 1

1

0

High-throughput

0.458

High

1239254

PPIL4
Peptidyl-prolyl cis-trans isomerase-like 4

1

0

High-throughput

0.458

High

1239255

PSPC1
Paraspeckle component 1

1

0

High-throughput

0.458

High

1239261

DCPS
m7GpppX diphosphatase

1

0

High-throughput

0.458

High

1239263

TMA16
Translation machinery-associated protein 16

1

0

High-throughput

0.458

High

1239264

ZMAT2
Zinc finger matrin-type protein 2

1

0

High-throughput

0.458

High

1239265

PP1RA
Serine/threonine-protein phosphatase 1 regulatory subunit 10

1

0

High-throughput

0.458

High

1239270

MMTA2
Multiple myeloma tumor-associated protein 2

1

0

High-throughput

0.458

High

1239272

UBE2O
(E3-independent) E2 ubiquitin-conjugating enzyme

1

0

High-throughput

0.458

High

1239273

NSRP1
Nuclear speckle splicing regulatory protein 1

1

0

High-throughput

0.458

High

1239275

CHM4B
Charged multivesicular body protein 4b

1

0

High-throughput

0.458

High

1239276

ECT2
Protein ECT2

1

0

High-throughput

0.458

High

1239277

ANLN
Anillin

1

0

High-throughput

0.458

High

1239278

RAD18
E3 ubiquitin-protein ligase RAD18

1

0

High-throughput

0.458

High

1239282

WDR70
WD repeat-containing protein 70

1

0

High-throughput

0.458

High

1239285

NXF1
Nuclear RNA export factor 1

1

0

High-throughput

0.458

High

1239286

ZRAN1
Ubiquitin thioesterase ZRANB1

1

0

High-throughput

0.458

High

1239288

CCNL1
Cyclin-L1

1

0

High-throughput

0.458

High

1239293

TSSC4
U5 small nuclear ribonucleoprotein TSSC4

1

0

High-throughput

0.458

High

1239287

DDX41
Probable ATP-dependent RNA helicase DDX41

1

1

High-throughput

0.445

High

1126283

FA76B
Protein FAM76B

1

1

High-throughput

0.437

High

1205990

MIB1
E3 ubiquitin-protein ligase MIB1

1

1

High-throughput

0.437

High

1120399

NCBP3
Nuclear cap-binding protein subunit 3

1

0

High-throughput

0.426

High

1239271

UBL5
Ubiquitin-like protein 5

1

0

Small-scale

0.426

High

1172855

NKAP1
Uncharacterized protein NKAPD1

2

0

High-throughput

0.328

High

1239259

DVL3
Segment polarity protein dishevelled homolog DVL-3

2

0

High-throughput

0.316

High

1239262

AP2M1
AP-2 complex subunit mu

2

0

High-throughput

0.316

High

150068

TYB4Y
Thymosin beta-4, Y-chromosomal

1

0

High-throughput

0.279

Low

159662

QCR10
Cytochrome b-c1 complex subunit 10

1

0

High-throughput

0.279

Low

330392

CX001
Putative transmembrane protein CXorf1

1

0

High-throughput

0.279

Low

456173

IFI6
Interferon alpha-inducible protein 6

1

0

High-throughput

0.279

Low

483484

SAA1
Serum amyloid A-1 protein

1

0

High-throughput

0.279

Low

1022736

MALL
MAL-like protein

1

0

High-throughput

0.279

Low

1118278

GAG2E
G antigen 2E

1

0

High-throughput

0.279

Low

1155839

MYORG
Myogenesis-regulating glycosidase

1

0

High-throughput

0.279

Low

1174061

UBP54
Inactive ubiquitin carboxyl-terminal hydrolase 54

1

0

High-throughput

0.279

Low

1231390

CT197
Putative uncharacterized protein encoded by LINC02910

1

0

High-throughput

0.279

Low

1239249

FDSCP
Follicular dendritic cell secreted peptide

1

0

High-throughput

0.279

Low

1239256

JPH3
Junctophilin-3

1

0

High-throughput

0.279

Low

1239260

I27L1
Interferon alpha-inducible protein 27-like protein 1

1

0

High-throughput

0.279

Low

1239279

TM14B
Transmembrane protein 14B

1

0

High-throughput

0.279

Low

1239280

ACER3
Alkaline ceramidase 3

1

0

High-throughput

0.279

Low

1239281

KTU
Protein kintoun

1

0

High-throughput

0.279

Low

1239283

ELOV5
Very long chain fatty acid elongase 5

1

0

High-throughput

0.279

Low

1239284

PEN2
Gamma-secretase subunit PEN-2

1

0

High-throughput

0.279

Low

1239289

ANR50
Ankyrin repeat domain-containing protein 50

1

0

High-throughput

0.279

Low

1239295

SPCS1
Signal peptidase complex subunit 1

1

0

High-throughput

0.279

Low

1239252

ZCH10
Zinc finger CCHC domain-containing protein 10

1

0

High-throughput

0.265

Low

395219

A4
Amyloid-beta precursor protein

1

0

High-throughput

0.261

Low

120003

AP3B1
AP-3 complex subunit beta-1

1

0

High-throughput

0.249

Low

149059

CTRO
Citron Rho-interacting kinase

1

0

High-throughput

0.249

Low

674699

AMRP
Alpha-2-macroglobulin receptor-associated protein

1

0

High-throughput

0.249

Low

991533

SPAG1
Sperm-associated antigen 1

1

0

High-throughput

0.249

Low

1052256

SRC8
Src substrate cortactin

1

0

High-throughput

0.249

Low

1170833

TRI67
Tripartite motif-containing protein 67

1

0

High-throughput

0.249

Low

1239268

TACO1
Translational activator of cytochrome c oxidase 1

1

0

High-throughput

0.249

Low


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Last updated: 15 Jul 2024