Protein: TAF9
SAGA complex/transcription factor TFIID complex subunit TAF9 (TAFII-17) (TAFII20) (TBP-associated factor 17 kDa) (TBP-associated factor 9) (Transcription initiation factor TFIID subunit 9)

Gene: TAF9
Organism: Saccharomyces cerevisiae S288C
Interactions: 201
UniProt ID: Q05027

Gene Ontology (top 5):
GO:0000124 - SAGA complex
GO:0003682 - chromatin binding
GO:0003713 - transcription coactivator activity
GO:0005634 - nucleus
GO:0005669 - transcription factor TFIID complex

Download interactions: TXT   MITAB-2.5

Interaction Interactor Experiments Homologs Category Interaction
Score
Confidence

916602

TAF6
SAGA complex/transcription factor TFIID complex subunit TAF6

15

8

Small-scale

0.986

High

793997

TAF5
SAGA complex/transcription factor TFIID complex subunit TAF5

15

9

Small-scale

0.981

High

1043972

TAF12
SAGA complex/transcription factor TFIID complex subunit TAF12

13

5

Small-scale

0.977

High

1050242

TAF10
SAGA complex/transcription factor TFIID complex subunit TAF10

12

5

Small-scale

0.975

High

893379

TAF4
Transcription initiation factor TFIID subunit 4

9

4

Small-scale

0.970

High

1050243

HFI1
SAGA complex subunit HFI1

9

1

Small-scale

0.965

High

898194

SPT20
SAGA complex subunit SPT20

11

0

Small-scale

0.925

High

1050248

TAF3
Transcription initiation factor TFIID subunit 3

5

0

High-throughput

0.877

High

1050233

TAF9
SAGA complex/transcription factor TFIID complex subunit TAF9

2

2

Small-scale

0.789

High

763022

SPT7
SAGA complex subunit SPT7

18

18

Small-scale

0.763

High

858473

TAF1
Transcription initiation factor TFIID subunit 1

16

3

Small-scale

0.761

High

1042372

GCN5
Histone acetyltransferase GCN5

10

12

Small-scale

0.754

High

1036344

ADA2
SAGA complex subunit ADA2

10

8

Small-scale

0.753

High

1046141

TAF11
Transcription initiation factor TFIID subunit 11

8

3

Small-scale

0.750

High

548841

TAF13
Transcription initiation factor TFIID subunit 13

9

6

Small-scale

0.749

High

738180

NGG1
SAGA complex subunit NGG1

9

2

Small-scale

0.749

High

805220

TRA1
SAGA complex/NuA4 acetyltransferase complex subunit TRA1

8

4

Small-scale

0.747

High

893341

UBP8
Ubiquitin carboxyl-terminal hydrolase 8

7

5

Small-scale

0.740

High

449472

SPT3
SAGA complex subunit SPT3

7

6

Small-scale

0.739

High

917866

SGF73
SAGA complex subunit SGF73

6

4

Small-scale

0.729

High

561533

TBP
TATA-box-binding protein

6

3

Small-scale

0.719

High

1050151

TAF7
Transcription initiation factor TFIID subunit 7

5

4

High-throughput

0.716

High

655641

TAF2
Transcription initiation factor TFIID subunit 2

5

1

Small-scale

0.709

High

807272

SPT8
SAGA complex subunit SPT8

6

0

Small-scale

0.701

High

1050258

SUS1
SAGA complex subunit SUS1

4

3

Small-scale

0.694

High

676677

SGF29
SAGA complex subunit SGF29

4

3

Small-scale

0.686

High

763373

TAF14
Transcription initiation factor TFIID subunit 14

4

2

Small-scale

0.686

High

1040680

SGF11
SAGA complex subunit SGF11

5

0

Small-scale

0.678

High

395265

GCN4
General control transcription factor GCN4

4

0

Small-scale

0.660

High

1043904

TAF8
Transcription initiation factor TFIID subunit 8

4

0

Small-scale

0.657

High

836100

COPB2
Coatomer subunit beta'

1

4

High-throughput

0.618

High

844349

ELP2
Elongator complex protein 2

1

6

High-throughput

0.618

High

1050253

CMR1
DNA damage-binding protein CMR1

1

2

High-throughput

0.618

High

850575

RSC8
Chromatin structure-remodeling complex protein RSC8

2

8

High-throughput

0.601

High

590723

HSP26
Heat shock protein 26

2

0

Small-scale

0.585

High

734476

BTAF1
TATA-binding protein-associated factor MOT1

2

5

Small-scale

0.584

High

1047277

ERB1
Ribosome biogenesis protein ERB1

1

2

High-throughput

0.575

High

525140

HSP71
Heat shock protein SSA1

2

1

High-throughput

0.552

High

819788

SSB2
Ribosome-associated molecular chaperone SSB2

2

1

High-throughput

0.552

High

359069

G3P2
Glyceraldehyde-3-phosphate dehydrogenase 2

1

1

High-throughput

0.536

High

504610

YL12B
Transposon Ty1-LR2 Gag-Pol polyprotein

1

1

High-throughput

0.536

High

912381

UBA2
Ubiquitin-activating enzyme E1-like

1

1

High-throughput

0.536

High

1039038

IMA1
Importin subunit alpha

1

4

High-throughput

0.536

High

922119

COPA
Coatomer subunit alpha

1

2

High-throughput

0.514

High

402114

RPB1
DNA-directed RNA polymerase II subunit RPB1

1

0

High-throughput

0.513

High

470590

RPB2
DNA-directed RNA polymerase II subunit RPB2

1

0

High-throughput

0.513

High

597274

BIP
Endoplasmic reticulum chaperone BiP

1

0

High-throughput

0.513

High

614848

SNF5
SWI/SNF chromatin-remodeling complex subunit SNF5

1

0

High-throughput

0.513

High

677703

MRC1
Mediator of replication checkpoint protein 1

1

0

High-throughput

0.513

High

733678

GLNA
Glutamine synthetase

1

0

High-throughput

0.513

High

858357

SAC3
Nuclear mRNA export protein SAC3

1

0

High-throughput

0.513

High

1050254

IF6
Eukaryotic translation initiation factor 6

1

0

High-throughput

0.513

High

359531

G3P1
Glyceraldehyde-3-phosphate dehydrogenase 1

1

1

High-throughput

0.489

High

383197

RLA4
Large ribosomal subunit protein P2B

1

1

High-throughput

0.489

High

427752

RLA2
Large ribosomal subunit protein P2A

1

1

High-throughput

0.489

High

737775

IF2G
Eukaryotic translation initiation factor 2 subunit gamma

1

1

High-throughput

0.489

High

823652

TCPE
T-complex protein 1 subunit epsilon

1

1

High-throughput

0.489

High

509717

UBI4P
Polyubiquitin [Cleaved into: Ubiquitin]

1

1

High-throughput

0.479

High

708175

TF2B
Transcription initiation factor IIB

1

2

High-throughput

0.479

High

744344

CHD1
Chromo domain-containing protein 1

1

3

Small-scale

0.479

High

963715

H3
Histone H3

1

3

High-throughput

0.479

High

1050256

H2AZ
Histone H2A.Z

1

1

Small-scale

0.479

High

1050257

SMC6
Structural maintenance of chromosomes protein 6

1

2

High-throughput

0.479

High

624941

MED15
Mediator of RNA polymerase II transcription subunit 15

1

0

Small-scale

0.460

High

924376

APC1
Anaphase-promoting complex subunit 1

1

0

High-throughput

0.460

High

435359

RS3
Small ribosomal subunit protein uS3

1

0

High-throughput

0.458

High

736729

ASF1
Histone chaperone ASF1

1

0

Small-scale

0.458

High

744735

RRN6
RNA polymerase I-specific transcription initiation factor RRN6

1

0

High-throughput

0.458

High

745874

GSP1
GTP-binding nuclear protein GSP1/CNR1

1

0

High-throughput

0.458

High

764003

SPT10
Protein SPT10

1

0

High-throughput

0.458

High

804125

RPP1
Ribonuclease P/MRP protein subunit RPP1

1

0

High-throughput

0.458

High

806408

ELP5
Elongator complex protein 5

1

0

High-throughput

0.458

High

826305

DOT5
Peroxiredoxin DOT5

1

0

High-throughput

0.458

High

826831

DSN1
Kinetochore-associated protein DSN1

1

0

High-throughput

0.458

High

865750

MOG1
Nuclear import protein MOG1

1

0

High-throughput

0.458

High

925050

APJ1
J domain-containing protein APJ1

1

0

High-throughput

0.458

High

1034908

SKO1
CRE-binding bZIP protein SKO1

1

0

High-throughput

0.458

High

1039601

ELP4
Elongator complex protein 4

1

0

High-throughput

0.458

High

1039691

ELP3
Elongator complex protein 3

1

0

High-throughput

0.458

High

1044745

SCC2
Sister chromatid cohesion protein 2

1

0

High-throughput

0.458

High

1046165

PDS5
Sister chromatid cohesion protein PDS5

1

0

High-throughput

0.458

High

1049102

ELP6
Elongator complex protein 6

1

0

High-throughput

0.458

High

1050236

ELP1
Elongator complex protein 1

1

0

High-throughput

0.458

High

1050244

MLH3
DNA mismatch repair protein MLH3

1

0

High-throughput

0.458

High

1050246

SCC1
Sister chromatid cohesion protein 1

1

0

High-throughput

0.458

High

381264

H2B1
Histone H2B.1

1

1

High-throughput

0.445

High

436517

RS31
Ubiquitin-ribosomal protein eS31 fusion protein [Cleaved into: Ubiquitin; Small ribosomal subunit protein eS31

1

1

High-throughput

0.445

High

527666

HSP72
Heat shock protein SSA2

1

1

High-throughput

0.445

High

546262

SSB1
Ribosome-associated molecular chaperone SSB1

1

1

High-throughput

0.445

High

671558

SWI4
Regulatory protein SWI4

1

1

High-throughput

0.445

High

754186

MSN2
Zinc finger protein MSN2

1

1

High-throughput

0.445

High

754246

MSN4
Zinc finger protein MSN4

1

1

High-throughput

0.445

High

781802

SET3
SET domain-containing protein 3

1

1

High-throughput

0.445

High

874263

CLA4
Serine/threonine-protein kinase CLA4

1

1

High-throughput

0.445

High

1035327

RSC4
Chromatin structure-remodeling complex subunit RSC4

1

11

High-throughput

0.445

High

1044456

RUVB1
RuvB-like protein 1

1

3

High-throughput

0.445

High

1050245

YG11B
Transposon Ty1-GR1 Gag-Pol polyprotein

1

1

High-throughput

0.445

High

1050247

HAL9
Halotolerance protein 9

1

1

High-throughput

0.445

High

1050250

RUVB2
RuvB-like protein 2

1

3

High-throughput

0.445

High

1035089

UBC7
Ubiquitin-conjugating enzyme E2 7

1

0

High-throughput

0.438

High

442113

RS14A
Small ribosomal subunit protein uS11A

1

1

High-throughput

0.437

High

511964

RS30A
Small ribosomal subunit protein eS30A

1

1

High-throughput

0.437

High

419874

H2A2
Histone H2A.2

1

0

High-throughput

0.426

High

448222

HAP2
Transcriptional activator HAP2

1

0

High-throughput

0.426

High

553562

PDR1
Transcription factor PDR1

1

0

High-throughput

0.426

High

584939

TRM1
tRNA

1

0

High-throughput

0.426

High

680060

CDC48
Cell division control protein 48

1

0

High-throughput

0.426

High

692623

NSR1
Nuclear localization sequence-binding protein

1

0

High-throughput

0.426

High

694642

SPT5
Transcription elongation factor SPT5

1

0

High-throughput

0.426

High

779104

EF1G2
Elongation factor 1-gamma 2

1

0

High-throughput

0.426

High

804452

SSZ1
Ribosome-associated complex subunit SSZ1

1

0

High-throughput

0.426

High

816553

SNU13
13 kDa ribonucleoprotein-associated protein

1

0

High-throughput

0.426

High

822436

PRS4
26S proteasome regulatory subunit 4 homolog

1

0

High-throughput

0.426

High

917064

MCM6
DNA replication licensing factor MCM6

1

0

High-throughput

0.426

High

918994

PESC
Pescadillo homolog

1

0

High-throughput

0.426

High

1027372

REG1
Resistance to glucose repression protein 1

1

0

High-throughput

0.426

High

1041434

MTG1
Mitochondrial GTPase 1

1

0

High-throughput

0.426

High

1045042

PPN1
Endopolyphosphatase

1

0

High-throughput

0.426

High

1046512

PUF6
Pumilio homology domain family member 6

1

0

High-throughput

0.426

High

1050234

PDP3
NuA3 HAT complex component PDP3

1

0

Small-scale

0.426

High

1050235

FKBP4
FK506-binding protein 4

1

0

High-throughput

0.426

High

1050238

SUB2
ATP-dependent RNA helicase SUB2

1

0

High-throughput

0.426

High

1050239

RSC58
Chromatin structure-remodeling complex protein RSC58

1

0

High-throughput

0.426

High

1050251

CAF1A
Chromatin assembly factor 1 subunit A

1

0

High-throughput

0.426

High

427611

RLA1
Large ribosomal subunit protein P1A

1

1

High-throughput

0.407

High

478429

EI2BG
Translation initiation factor eIF2B subunit gamma

1

1

High-throughput

0.407

High

511991

RS30B
Small ribosomal subunit protein eS30B

1

1

High-throughput

0.407

High

528872

RLA3
Large ribosomal subunit protein P1B

1

1

High-throughput

0.407

High

738609

EI2BE
Translation initiation factor eIF2B subunit epsilon

1

1

High-throughput

0.407

High

811037

TCPD
T-complex protein 1 subunit delta

1

1

High-throughput

0.407

High

821039

EIF3I
Eukaryotic translation initiation factor 3 subunit I

1

4

High-throughput

0.407

High

919257

YG3A
Uncharacterized protein YGR130C

1

1

High-throughput

0.407

High

1050252

NOP58
Nucleolar protein 58

1

1

High-throughput

0.407

High

636812

PUR6
Phosphoribosylaminoimidazole carboxylase

1

0

High-throughput

0.282

High

149955

RS9A
Small ribosomal subunit protein uS4A

1

0

High-throughput

0.279

Low

386864

TBB
Tubulin beta chain

1

0

High-throughput

0.279

Low

427444

RLA0
Large ribosomal subunit protein uL10

1

0

High-throughput

0.279

Low

569864

RL30
Large ribosomal subunit protein eL30

1

0

High-throughput

0.279

Low

572649

ALF
Fructose-bisphosphate aldolase

1

0

High-throughput

0.279

Low

580062

HSC82
ATP-dependent molecular chaperone HSC82

1

0

High-throughput

0.279

Low

626885

HSP60
Heat shock protein 60, mitochondrial

1

0

High-throughput

0.279

Low

639457

DIT1
Spore wall maturation protein DIT1

1

0

High-throughput

0.279

Low

644840

CLH
Clathrin heavy chain

1

0

High-throughput

0.279

Low

735758

VA0D
V-type proton ATPase subunit d

1

0

High-throughput

0.279

Low

781262

RL14A
Large ribosomal subunit protein eL14A

1

0

High-throughput

0.279

Low

805309

GGA2
ADP-ribosylation factor-binding protein GGA2

1

0

High-throughput

0.279

Low

865071

TCPQ
T-complex protein 1 subunit theta

1

0

High-throughput

0.279

Low

868446

LCF4
Long-chain-fatty-acid--CoA ligase 4

1

0

High-throughput

0.279

Low

873833

BUL1
Ubiquitin ligase-binding protein BUL1

1

0

High-throughput

0.279

Low

918687

PIL1
Sphingolipid long chain base-responsive protein PIL1

1

0

High-throughput

0.279

Low

1018158

RL34A
Large ribosomal subunit protein eL34A

1

0

High-throughput

0.279

Low

1025039

NUM1
Nuclear migration protein NUM1

1

0

High-throughput

0.279

Low

1028029

ACAC
Acetyl-CoA carboxylase

1

0

High-throughput

0.279

Low

1043594

CLU
Clustered mitochondria protein 1

1

0

High-throughput

0.279

Low

1050237

MRL1
Mannose 6-phosphate receptor-like protein 1

1

0

High-throughput

0.279

Low

798543

BIT2
Probable target of rapamycin complex 2 subunit BIT2

1

0

High-throughput

0.265

Low

877985

NUP57
Nucleoporin NUP57

1

0

High-throughput

0.265

Low

436173

RS13
Small ribosomal subunit protein uS15

1

0

High-throughput

0.249

Low

503241

RS22A
Small ribosomal subunit protein uS8A

1

0

High-throughput

0.249

Low

511294

RL20B
Large ribosomal subunit protein eL20B

1

0

High-throughput

0.249

Low

513577

RL1A
Large ribosomal subunit protein uL1A

1

0

High-throughput

0.249

Low

513773

RL2A
Large ribosomal subunit protein uL2A

1

0

High-throughput

0.249

Low

514366

RL12B
Large ribosomal subunit protein uL11B

1

0

High-throughput

0.249

Low

674837

RS2
Small ribosomal subunit protein uS5

1

0

High-throughput

0.249

Low

689659

RS7A
Small ribosomal subunit protein eS7A

1

0

High-throughput

0.249

Low

812651

LAA1
AP-1 accessory protein LAA1

1

0

High-throughput

0.249

Low

836135

POP1
Ribonucleases P/MRP protein subunit POP1

1

0

High-throughput

0.249

Low

923879

GIS2
Zinc finger protein GIS2

1

0

High-throughput

0.249

Low

1050241

RS10A
Small ribosomal subunit protein eS10A

1

0

High-throughput

0.249

Low

417177

VDAC1
Non-selective voltage-gated ion channel 1

1

0

High-throughput

0.232

Low

450647

FAS1
Fatty acid synthase subunit beta

1

0

High-throughput

0.232

Low

484797

DLDH
Dihydrolipoyl dehydrogenase, mitochondrial

1

0

High-throughput

0.232

Low

510814

HSP77
Import motor subunit, mitochondrial

1

0

High-throughput

0.232

Low

518389

IF4A
ATP-dependent RNA helicase eIF4A

1

0

High-throughput

0.232

Low

575613

PP2B2
Serine/threonine-protein phosphatase 2B catalytic subunit A2

1

0

High-throughput

0.232

Low

597556

EF3A
Elongation factor 3A

1

0

High-throughput

0.232

Low

599074

PFKA2
ATP-dependent 6-phosphofructokinase subunit beta

1

0

High-throughput

0.232

Low

603548

VATA
V-type proton ATPase catalytic subunit A

1

0

High-throughput

0.232

Low

605345

CAP
Adenylyl cyclase-associated protein

1

0

High-throughput

0.232

Low

632919

IF2A
Eukaryotic translation initiation factor 2 subunit alpha

1

0

High-throughput

0.232

Low

639068

VPS1
Vacuolar protein sorting-associated protein 1

1

0

High-throughput

0.232

Low

672348

RV161
Reduced viability upon starvation protein 161

1

0

High-throughput

0.232

Low

692433

KCC1
Calcium/calmodulin-dependent protein kinase I

1

0

High-throughput

0.232

Low

700292

GAR1
H/ACA ribonucleoprotein complex subunit GAR1

1

0

High-throughput

0.232

Low

701740

URA7
CTP synthase 1

1

0

High-throughput

0.232

Low

734205

EF2
Elongation factor 2

1

0

High-throughput

0.232

Low

738430

EIF3C
Eukaryotic translation initiation factor 3 subunit C

1

0

High-throughput

0.232

Low

738700

EI2BB
Translation initiation factor eIF2B subunit beta

1

0

High-throughput

0.232

Low

751485

CBF5
H/ACA ribonucleoprotein complex subunit CBF5

1

0

High-throughput

0.232

Low

752726

HSP78
Heat shock protein 78, mitochondrial

1

0

High-throughput

0.232

Low

802592

SYNC
Asparagine--tRNA ligase, cytoplasmic

1

0

High-throughput

0.232

Low

816179

DPO5
rDNA transcriptional regulator POL5

1

0

High-throughput

0.232

Low

820359

YNU8
Uncharacterized protein YNL208W

1

0

High-throughput

0.232

Low

864329

NET1
Nucleolar protein NET1

1

0

High-throughput

0.232

Low

924628

NAT10
RNA cytidine acetyltransferase

1

0

High-throughput

0.232

Low

1039630

NOG1
Nucleolar GTP-binding protein 1

1

0

High-throughput

0.232

Low

1050078

RTN1
Reticulon-like protein 1

1

0

High-throughput

0.232

Low

1050240

BRX1
Ribosome biogenesis protein BRX1

1

0

High-throughput

0.232

Low

1050249

SFI1
Protein SFI1

1

0

High-throughput

0.232

Low

1050255

RQC2
Ribosome quality control complex subunit 2

1

0

High-throughput

0.232

Low


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Last updated: 11Aug2025